RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 TTLL4Q14679 1199 aa12.99□□□□□ -0.33
CBWD3-206ENST00000478048 ZNF174Q15697 407 aa12.99□□□□□ -0.33
CBWD3-206ENST00000478048 TTC38Q5R3I4 469 aa12.99□□□□□ -0.33
CBWD3-206ENST00000478048 MYSM1Q5VVJ2 828 aa12.99□□□□□ -0.33
CBWD3-206ENST00000478048 PPP4R3AQ6IN85 833 aa12.99□□□□□ -0.33
CBWD3-206ENST00000478048 MOXD1Q6UVY6 613 aa12.99□□□□□ -0.33
CBWD3-206ENST00000478048 NIPA1Q7RTP0 329 aa12.99□□□□□ -0.33
CBWD3-206ENST00000478048 BRAPQ7Z569 592 aa12.99□□□□□ -0.33
CBWD3-206ENST00000478048 RNF208Q9H0X6 261 aa12.99□□□□□ -0.33
CBWD3-206ENST00000478048 PAK6Q9NQU5 681 aaPredicted RBP12.99□□□□□ -0.33
CBWD3-206ENST00000478048 DDX25Q9UHL0 483 aaKnown RBP12.99□□□□□ -0.33
CBWD3-206ENST00000478048 GNEQ9Y223 722 aaKnown RBP12.99□□□□□ -0.33
CBWD3-206ENST00000478048 MSH4O15457 936 aa12.99□□□□□ -0.33
CBWD3-206ENST00000478048 KCNA2P16389 499 aa12.99□□□□□ -0.33
CBWD3-206ENST00000478048 MCM7P33993 719 aa12.99□□□□□ -0.33
CBWD3-206ENST00000478048 Q4G0T1 1027 aa12.99□□□□□ -0.33
CBWD3-206ENST00000478048 DUSP28Q4G0W2 176 aa12.99□□□□□ -0.33
CBWD3-206ENST00000478048 ZSCAN16Q9H4T2 348 aaPredicted RBP12.99□□□□□ -0.33
CBWD3-206ENST00000478048 AGO4Q9HCK5 861 aaKnown RBP12.99□□□□□ -0.33
CBWD3-206ENST00000478048 SEPT9Q9UHD8 586 aaPredicted RBP12.99□□□□□ -0.33
CBWD3-206ENST00000478048 DDX20Q9UHI6 824 aaKnown RBP12.99□□□□□ -0.33
CBWD3-206ENST00000478048 NOL7Q9UMY1 257 aaKnown RBP12.99□□□□□ -0.33
CBWD3-206ENST00000478048 TELO2Q9Y4R8 837 aa12.99□□□□□ -0.33
CBWD3-206ENST00000478048 MAP3K7O43318 606 aa12.98□□□□□ -0.33
CBWD3-206ENST00000478048 TGFB3P10600 412 aa12.98□□□□□ -0.33
CBWD3-206ENST00000478048 PDIA4P13667 645 aaKnown RBP12.98□□□□□ -0.33
CBWD3-206ENST00000478048 GCFC2P16383 781 aaKnown RBP12.98□□□□□ -0.33
CBWD3-206ENST00000478048 TRAPPC10P48553 1259 aa12.98□□□□□ -0.33
CBWD3-206ENST00000478048 SETQ01105 290 aaPredicted RBP12.98□□□□□ -0.33
CBWD3-206ENST00000478048 ITGB3BPQ13352 177 aaPredicted RBP12.98□□□□□ -0.33
CBWD3-206ENST00000478048 FOXD4L6Q3SYB3 417 aaPredicted RBP12.98□□□□□ -0.33
CBWD3-206ENST00000478048 RILPL1Q5EBL4 403 aa12.98□□□□□ -0.33
CBWD3-206ENST00000478048 FOXD4L3Q6VB84 417 aaPredicted RBP12.98□□□□□ -0.33
CBWD3-206ENST00000478048 DEFB118Q96PH6 123 aa12.98□□□□□ -0.33
CBWD3-206ENST00000478048 FTOQ9C0B1 505 aaKnown RBP eCLIP12.98□□□□□ -0.33
CBWD3-206ENST00000478048 TMEM60Q9H2L4 133 aa12.98□□□□□ -0.33
CBWD3-206ENST00000478048 MYH15Q9Y2K3 1946 aa12.98□□□□□ -0.33
CBWD3-206ENST00000478048 FRMPD3Q5JV73 1810 aa12.98□□□□□ -0.33
CBWD3-206ENST00000478048 MAFGO15525 162 aa12.97□□□□□ -0.33
CBWD3-206ENST00000478048 DYNC1LI2O43237 492 aaPredicted RBP12.97□□□□□ -0.33
CBWD3-206ENST00000478048 GGPS1O95749 300 aa12.97□□□□□ -0.33
CBWD3-206ENST00000478048 CYFIP1Q7L576 1253 aa12.97□□□□□ -0.33
CBWD3-206ENST00000478048 PACS2Q86VP3 889 aa12.97□□□□□ -0.33
CBWD3-206ENST00000478048 ETNPPLQ8TBG4 499 aa12.97□□□□□ -0.33
CBWD3-206ENST00000478048 HAS1Q92839 578 aa12.97□□□□□ -0.33
CBWD3-206ENST00000478048 CHAMP1Q96JM3 812 aa12.97□□□□□ -0.33
CBWD3-206ENST00000478048 CDHR1Q96JP9 859 aa12.97□□□□□ -0.33
CBWD3-206ENST00000478048 NAP1L4Q99733 375 aaKnown RBP12.97□□□□□ -0.33
CBWD3-206ENST00000478048 ZNF577Q9BSK1 485 aa12.97□□□□□ -0.33
CBWD3-206ENST00000478048 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.97□□□□□ -0.33
CBWD3-206ENST00000478048 IPO5O00410 1097 aaKnown RBP12.96□□□□□ -0.33
CBWD3-206ENST00000478048 DHX15O43143 795 aaKnown RBP12.96□□□□□ -0.33
CBWD3-206ENST00000478048 NEMFO60524 1076 aa12.96□□□□□ -0.33
CBWD3-206ENST00000478048 DUSP11O75319 330 aaKnown RBP12.96□□□□□ -0.33
CBWD3-206ENST00000478048 PGK1P00558 417 aa12.96□□□□□ -0.33
CBWD3-206ENST00000478048 RARBP10826 455 aa12.96□□□□□ -0.33
CBWD3-206ENST00000478048 ARHGAP1Q07960 439 aa12.96□□□□□ -0.33
CBWD3-206ENST00000478048 E2F4Q16254 413 aa12.96□□□□□ -0.33
CBWD3-206ENST00000478048 CELF3Q5SZQ8 465 aaKnown RBP12.96□□□□□ -0.33
CBWD3-206ENST00000478048 KCNV1Q6PIU1 500 aa12.96□□□□□ -0.33
CBWD3-206ENST00000478048 TLK2Q86UE8 772 aa12.96□□□□□ -0.33
CBWD3-206ENST00000478048 OR6J1Q8NGC5 347 aa12.96□□□□□ -0.33
CBWD3-206ENST00000478048 SENP7Q9BQF6 1050 aa12.96□□□□□ -0.33
CBWD3-206ENST00000478048 KCNMB3Q9NPA1 279 aa12.96□□□□□ -0.33
CBWD3-206ENST00000478048 SYNRGQ9UMZ2 1314 aa12.96□□□□□ -0.33
CBWD3-206ENST00000478048 MYADML2A6NDP7 307 aa12.96□□□□□ -0.34
CBWD3-206ENST00000478048 DDX39AO00148 427 aaKnown RBP12.96□□□□□ -0.34
CBWD3-206ENST00000478048 CTAGE5O15320 804 aa12.96□□□□□ -0.34
CBWD3-206ENST00000478048 FARP2O94887 1054 aaPredicted RBP12.96□□□□□ -0.34
CBWD3-206ENST00000478048 GH1P01241 217 aa12.96□□□□□ -0.34
CBWD3-206ENST00000478048 SP4Q02446 784 aa12.96□□□□□ -0.34
CBWD3-206ENST00000478048 HSDL1Q3SXM5 330 aa12.96□□□□□ -0.34
CBWD3-206ENST00000478048 DHX37Q8IY37 1157 aaKnown RBP12.96□□□□□ -0.34
CBWD3-206ENST00000478048 C4orf32Q8N8J7 132 aa12.96□□□□□ -0.34
CBWD3-206ENST00000478048 XPNPEP3Q9NQH7 507 aa12.96□□□□□ -0.34
CBWD3-206ENST00000478048 CLIC4Q9Y696 253 aa12.96□□□□□ -0.34
CBWD3-206ENST00000478048 TCHHQ07283 1943 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 NKRFO15226 690 aaKnown RBP eCLIP12.95□□□□□ -0.34
CBWD3-206ENST00000478048 MSCO60682 206 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 ADAMTS4O75173 837 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 GJB1P08034 283 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 GJA9P57773 515 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 NUCB2P80303 420 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 BEX3Q00994 111 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 CEBPZQ03701 1054 aaKnown RBP12.95□□□□□ -0.34
CBWD3-206ENST00000478048 PTGDRQ13258 359 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 NEDD9Q14511 834 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 SF3A1Q15459 793 aaKnown RBP12.95□□□□□ -0.34
CBWD3-206ENST00000478048 CALCRLQ16602 461 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 AFG1LQ8WV93 481 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 SLC5A5Q92911 643 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 MTMR9Q96QG7 549 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 USP28Q96RU2 1077 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 MLXIPQ9HAP2 919 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 TFIP11Q9UBB9 837 aaKnown RBP12.95□□□□□ -0.34
CBWD3-206ENST00000478048 Q9Y3F1 56 aa12.95□□□□□ -0.34
CBWD3-206ENST00000478048 ARIH1Q9Y4X5 557 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-206ENST00000478048 NFASCO94856 1347 aa12.94□□□□□ -0.34
CBWD3-206ENST00000478048 PSMD10O75832 226 aa12.94□□□□□ -0.34
CBWD3-206ENST00000478048 SGPL1O95470 568 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms