RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 AK9Q5TCS8 1911 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 ALPK3Q96L96 1907 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 MYH13Q9UKX3 1938 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 PNMA6FA0A0J9YX94 578 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 PI4KAP2A4QPH2 592 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 SOWAHDA6NJG2 315 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 PRR33A8MZF0 331 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 FKTNO75072 461 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 SYN1P17600 705 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 MAPK1P28482 360 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 KRTAP10-2P60368 255 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 DDX10Q13206 875 aaKnown RBP5.88□□□□□ -1.47
CKS1B-207ENST00000477676 PKN2Q16513 984 aaKnown RBP5.88□□□□□ -1.47
CKS1B-207ENST00000477676 PPM1JQ5JR12 505 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 STRIP1Q5VSL9 837 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 TTLL5Q6EMB2 1281 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 LLGL2Q6P1M3 1020 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 OTOP1Q7RTM1 612 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 TMC7Q7Z402 723 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 TTC6Q86TZ1 520 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 KIAA0825Q8IV33 1275 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 PI4KAP1Q8N8J0 262 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 STK35Q8TDR2 534 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 ALPK1Q96QP1 1244 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 PTPN18Q99952 460 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 IFT57Q9NWB7 429 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 HDAC9Q9UKV0 1011 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 MAPK8IP1Q9UQF2 711 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 CSADQ9Y600 493 aa5.88□□□□□ -1.47
CKS1B-207ENST00000477676 CSF1RP07333 972 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 SRFP11831 508 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 RAC2P15153 192 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 NTF4P34130 210 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 MAP3K11Q16584 847 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 CCDC184Q52MB2 194 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 HABP4Q5JVS0 413 aaKnown RBP5.87□□□□□ -1.47
CKS1B-207ENST00000477676 NBPF12Q5TAG4 269 aaPredicted RBP5.87□□□□□ -1.47
CKS1B-207ENST00000477676 ALG1LQ6GMV1 187 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 KSR2Q6VAB6 950 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 UBE3BQ7Z3V4 1068 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 GGNQ86UU5 652 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 TSR2Q969E8 191 aaKnown RBP5.87□□□□□ -1.47
CKS1B-207ENST00000477676 WNK4Q96J92 1243 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 PRMT6Q96LA8 375 aaPredicted RBP5.87□□□□□ -1.47
CKS1B-207ENST00000477676 NECAB3Q96P71 396 aaPredicted RBP5.87□□□□□ -1.47
CKS1B-207ENST00000477676 PLA2G12BQ9BX93 195 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 COA1Q9GZY4 146 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 DEFB129Q9H1M3 183 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 TPX2Q9ULW0 747 aaKnown RBP5.87□□□□□ -1.47
CKS1B-207ENST00000477676 PCDHA4Q9UN74 947 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 ZNF804BA4D1E1 1349 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 PTPRFP10586 1907 aa5.87□□□□□ -1.47
CKS1B-207ENST00000477676 COL1A1P02452 1464 aaPredicted RBP5.86□□□□□ -1.47
CKS1B-207ENST00000477676 MYO3BQ8WXR4 1341 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 CLRN2A0PK11 232 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 H3BS24 57 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 TAF5LO75529 589 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 USP2O75604 605 aaPredicted RBP5.86□□□□□ -1.47
CKS1B-207ENST00000477676 LRIG2O94898 1065 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 IGHA2P01877 340 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 EN2P19622 333 aaPredicted RBP5.86□□□□□ -1.47
CKS1B-207ENST00000477676 CYP7A1P22680 504 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 ERVFC1P60507 584 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 GNAI1P63096 354 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 CHRNDQ07001 517 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 ZNF252P-AS1Q0IIN9 211 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 CRHR2Q13324 411 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 WDR43Q15061 677 aaKnown RBP eCLIP5.86□□□□□ -1.47
CKS1B-207ENST00000477676 ENOX2Q16206 610 aaKnown RBP5.86□□□□□ -1.47
CKS1B-207ENST00000477676 HDXQ7Z353 690 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 ARMC9Q7Z3E5 817 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 APOBEC3FQ8IUX4 373 aaKnown RBP5.86□□□□□ -1.47
CKS1B-207ENST00000477676 CD99L2Q8TCZ2 262 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 COX4I2Q96KJ9 171 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 KCNC2Q96PR1 638 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 CDC5LQ99459 802 aaKnown RBP5.86□□□□□ -1.47
CKS1B-207ENST00000477676 ARID3AQ99856 593 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 CD209Q9NNX6 404 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 SLAMF8Q9P0V8 285 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 TRIM17Q9Y577 477 aa5.86□□□□□ -1.47
CKS1B-207ENST00000477676 CDH23Q9H251 3354 aa5.85□□□□□ -1.47
CKS1B-207ENST00000477676 DCDC2CA8MYV0 355 aa5.85□□□□□ -1.47
CKS1B-207ENST00000477676 F8W031 263 aaPredicted RBP5.85□□□□□ -1.47
CKS1B-207ENST00000477676 HSP90B1P14625 803 aaKnown RBP5.85□□□□□ -1.47
CKS1B-207ENST00000477676 FXR1P51114 621 aaKnown RBP eCLIP5.85□□□□□ -1.47
CKS1B-207ENST00000477676 FGD1P98174 961 aa5.85□□□□□ -1.47
CKS1B-207ENST00000477676 FOXO4P98177 505 aa5.85□□□□□ -1.47
CKS1B-207ENST00000477676 SREBF2Q12772 1141 aa5.85□□□□□ -1.47
CKS1B-207ENST00000477676 GCKRQ14397 625 aa5.85□□□□□ -1.47
CKS1B-207ENST00000477676 CFAP100Q494V2 611 aa5.85□□□□□ -1.47
CKS1B-207ENST00000477676 EPHA10Q5JZY3 1008 aa5.85□□□□□ -1.47
CKS1B-207ENST00000477676 CCDC30Q5VVM6 783 aa5.85□□□□□ -1.47
CKS1B-207ENST00000477676 C15orf52Q6ZUT6 534 aaKnown RBP5.85□□□□□ -1.47
CKS1B-207ENST00000477676 BAHD1Q8TBE0 780 aaPredicted RBP5.85□□□□□ -1.47
CKS1B-207ENST00000477676 MYLIPQ8WY64 445 aa5.85□□□□□ -1.47
CKS1B-207ENST00000477676 ARMC5Q96C12 935 aa5.85□□□□□ -1.47
CKS1B-207ENST00000477676 TEPSINQ96N21 525 aa5.85□□□□□ -1.47
CKS1B-207ENST00000477676 PRKRIP1Q9H875 184 aaPredicted RBP5.85□□□□□ -1.47
CKS1B-207ENST00000477676 PTPN22Q9Y2R2 807 aa5.85□□□□□ -1.47
CKS1B-207ENST00000477676 PHIPQ8WWQ0 1821 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms