RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 PTGS1P23219 599 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 NFIL3Q16649 462 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 PNMA8AQ86V59 439 aaPredicted RBP13.56□□□□□ -0.24
PRPF39-203ENST00000477626 GUF1Q8N442 669 aaKnown RBP13.56□□□□□ -0.24
PRPF39-203ENST00000477626 MB21D1Q8N884 522 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 CHST13Q8NET6 341 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 KATNBL1Q9H079 304 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 ASCC2Q9H1I8 757 aaPredicted RBP13.56□□□□□ -0.24
PRPF39-203ENST00000477626 THAP9Q9H5L6 903 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 CTNND2Q9UQB3 1225 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 IREB2P48200 963 aaKnown RBP13.56□□□□□ -0.24
PRPF39-203ENST00000477626 UGCGQ16739 394 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 TCP11X2Q5H9J9 407 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 KRT79Q5XKE5 535 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 SNRNP48Q6IEG0 339 aaKnown RBP13.56□□□□□ -0.24
PRPF39-203ENST00000477626 DPY19L2Q6NUT2 758 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 RNF207Q6ZRF8 634 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 SCFD1Q8WVM8 642 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 NELFBQ8WX92 580 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 ELP3Q9H9T3 547 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 KIAA1024Q9UPX6 916 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 PASKQ96RG2 1323 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 IPO5O00410 1097 aaKnown RBP13.56□□□□□ -0.24
PRPF39-203ENST00000477626 TRAF5O00463 557 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 RAD21O60216 631 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 ZBED4O75132 1171 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 PAK1Q13153 545 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 BAATQ14032 418 aaPredicted RBP13.56□□□□□ -0.24
PRPF39-203ENST00000477626 EPHA7Q15375 998 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 MAMDC4Q6UXC1 1216 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 SV2BQ7L1I2 683 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 OPTNQ96CV9 577 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 GPRASP2Q96D09 838 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 DACH1Q9UI36 760 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 IGSF9BQ9UPX0 1349 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 UBXN2AP68543 259 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 Q3C1V9 767 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 RINT1Q6NUQ1 792 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 FCHSD1Q86WN1 690 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 DNERQ8NFT8 737 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 CALML4Q96GE6 196 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 RAB34Q9BZG1 259 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 RGL1Q9NZL6 768 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 DBR1Q9UK59 544 aaKnown RBP13.55□□□□□ -0.24
PRPF39-203ENST00000477626 RNF225M0QZC1 329 aaPredicted RBP13.55□□□□□ -0.24
PRPF39-203ENST00000477626 KRT31Q15323 416 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 CEP135Q66GS9 1140 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 GTPBP4Q9BZE4 634 aaKnown RBP13.55□□□□□ -0.24
PRPF39-203ENST00000477626 OLFML3Q9NRN5 406 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 IQCA1LA6NCM1 817 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 TEX33O43247 280 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 STAM2O75886 525 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 ALAS1P13196 640 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 LRMPQ12912 555 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 TC2NQ8N9U0 490 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 REEP2Q9BRK0 252 aa13.55□□□□□ -0.24
PRPF39-203ENST00000477626 CCNE1P24864 410 aa13.54□□□□□ -0.24
PRPF39-203ENST00000477626 FKBP1BP68106 108 aa13.54□□□□□ -0.24
PRPF39-203ENST00000477626 IKQ13123 557 aaPredicted RBP13.54□□□□□ -0.24
PRPF39-203ENST00000477626 LRCH2Q5VUJ6 765 aa13.54□□□□□ -0.24
PRPF39-203ENST00000477626 ACAD9Q9H845 621 aa13.54□□□□□ -0.24
PRPF39-203ENST00000477626 FRMPD3Q5JV73 1810 aa13.54□□□□□ -0.24
PRPF39-203ENST00000477626 GUCY2CP25092 1073 aa13.54□□□□□ -0.24
PRPF39-203ENST00000477626 CCT6AP40227 531 aaKnown RBP13.54□□□□□ -0.24
PRPF39-203ENST00000477626 P2RX5Q93086 422 aa13.54□□□□□ -0.24
PRPF39-203ENST00000477626 DYDC2Q96IM9 177 aa13.54□□□□□ -0.24
PRPF39-203ENST00000477626 ZNF830Q96NB3 372 aaPredicted RBP13.54□□□□□ -0.24
PRPF39-203ENST00000477626 IWS1Q96ST2 819 aa13.54□□□□□ -0.24
PRPF39-203ENST00000477626 PTPN18Q99952 460 aa13.54□□□□□ -0.24
PRPF39-203ENST00000477626 SPATC1LQ9H0A9 340 aa13.54□□□□□ -0.24
PRPF39-203ENST00000477626 KCND2Q9NZV8 630 aa13.54□□□□□ -0.24
PRPF39-203ENST00000477626 COBLO75128 1261 aa13.53□□□□□ -0.24
PRPF39-203ENST00000477626 HERVK_113P62684 666 aa13.53□□□□□ -0.24
PRPF39-203ENST00000477626 HAUS3Q68CZ6 603 aa13.53□□□□□ -0.24
PRPF39-203ENST00000477626 NEK9Q8TD19 979 aa13.53□□□□□ -0.24
PRPF39-203ENST00000477626 ZNF526Q8TF50 670 aaPredicted RBP13.53□□□□□ -0.24
PRPF39-203ENST00000477626 ZNF577Q9BSK1 485 aa13.53□□□□□ -0.24
PRPF39-203ENST00000477626 ATP4AP20648 1035 aa13.53□□□□□ -0.24
PRPF39-203ENST00000477626 CCDC186Q7Z3E2 898 aa13.53□□□□□ -0.24
PRPF39-203ENST00000477626 MOV10L1Q9BXT6 1211 aaKnown RBP13.53□□□□□ -0.24
PRPF39-203ENST00000477626 PDCD11Q14690 1871 aaKnown RBP13.53□□□□□ -0.24
PRPF39-203ENST00000477626 SYNGAP1Q96PV0 1343 aa13.53□□□□□ -0.24
PRPF39-203ENST00000477626 MAFGO15525 162 aa13.53□□□□□ -0.24
PRPF39-203ENST00000477626 PPP1R12BO60237 982 aaPredicted RBP13.53□□□□□ -0.24
PRPF39-203ENST00000477626 UIMC1Q96RL1 719 aa13.53□□□□□ -0.24
PRPF39-203ENST00000477626 RMDN3Q96TC7 470 aa13.53□□□□□ -0.24
PRPF39-203ENST00000477626 TRAF3IP3Q9Y228 551 aa13.53□□□□□ -0.24
PRPF39-203ENST00000477626 CASP8AP2Q9UKL3 1982 aa13.53□□□□□ -0.24
PRPF39-203ENST00000477626 ABHD15Q6UXT9 468 aa13.52□□□□□ -0.24
PRPF39-203ENST00000477626 RDM1Q8NG50 284 aa13.52□□□□□ -0.24
PRPF39-203ENST00000477626 ZFP91Q96JP5 570 aaPredicted RBP13.52□□□□□ -0.24
PRPF39-203ENST00000477626 PCYT2Q99447 389 aa13.52□□□□□ -0.24
PRPF39-203ENST00000477626 TRIM5Q9C035 493 aa13.52□□□□□ -0.24
PRPF39-203ENST00000477626 MORF4L1Q9UBU8 362 aa13.52□□□□□ -0.24
PRPF39-203ENST00000477626 RSPH10B2B2RC85 870 aa13.52□□□□□ -0.25
PRPF39-203ENST00000477626 FANCGO15287 622 aa13.52□□□□□ -0.25
PRPF39-203ENST00000477626 ZNF862O60290 1169 aa13.52□□□□□ -0.25
PRPF39-203ENST00000477626 NR3C2P08235 984 aa13.52□□□□□ -0.25
PRPF39-203ENST00000477626 RSPH10BP0C881 870 aa13.52□□□□□ -0.25
PRPF39-203ENST00000477626 ALDH5A1P51649 535 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms