RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 ERCC5P28715 1186 aaPredicted RBP7.43□□□□□ -1.22
CDKN1B-204ENST00000477087 AMPD2Q01433 879 aa7.43□□□□□ -1.22
CDKN1B-204ENST00000477087 MVKQ03426 396 aa7.43□□□□□ -1.22
CDKN1B-204ENST00000477087 NR1I3Q14994 352 aa7.43□□□□□ -1.22
CDKN1B-204ENST00000477087 DPY19L1Q2PZI1 675 aa7.43□□□□□ -1.22
CDKN1B-204ENST00000477087 AMOTQ4VCS5 1084 aa7.43□□□□□ -1.22
CDKN1B-204ENST00000477087 KLHL6Q8WZ60 621 aa7.43□□□□□ -1.22
CDKN1B-204ENST00000477087 CNTD2Q9H8S5 307 aa7.43□□□□□ -1.22
CDKN1B-204ENST00000477087 IFT57Q9NWB7 429 aa7.43□□□□□ -1.22
CDKN1B-204ENST00000477087 KIF20BQ96Q89 1820 aa7.43□□□□□ -1.22
CDKN1B-204ENST00000477087 NCAPD2Q15021 1401 aa7.43□□□□□ -1.22
CDKN1B-204ENST00000477087 PXDNQ92626 1479 aa7.43□□□□□ -1.22
CDKN1B-204ENST00000477087 SHPRHQ149N8 1683 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 STXBP3O00186 592 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 AURKAO14965 403 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 VAMP4O75379 141 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 NAT2P11245 290 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 PI3P19957 117 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 L1CAMP32004 1257 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 EPHB3P54753 998 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 CORO7P57737 925 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 GNAI1P63096 354 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 TCERG1LQ5VWI1 586 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 EEF1DP3Q658K8 133 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 BICRALQ6AI39 1079 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 RCSD1Q6JBY9 416 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 ZC3H14Q6PJT7 736 aaKnown RBP7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 RPTNQ6XPR3 784 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 TMEM151BQ8IW70 566 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 PDLIM7Q9NR12 457 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 CGGBP1Q9UFW8 167 aaPredicted RBP7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 SOS1Q07889 1333 aaPredicted RBP7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 TNS3Q68CZ2 1445 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 ABCC6O95255 1503 aa7.42□□□□□ -1.22
CDKN1B-204ENST00000477087 LTBP4Q8N2S1 1624 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 STRCP1A6NGW2 1772 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 ANKRD34BA5PLL1 514 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 CHL1O00533 1208 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 TOM1O60784 492 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 SSBP05455 408 aaKnown RBP eCLIP7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 HMOX1P09601 288 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 MSL3P1P0C860 447 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 ATF4P18848 351 aaPredicted RBP7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 SEPHS1P49903 392 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 CDR1P51861 262 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 GRB10Q13322 594 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 GNL2Q13823 731 aaKnown RBP7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 SSPNQ14714 243 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 CBX2Q14781 532 aaPredicted RBP7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 ALDH1L2Q3SY69 923 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 CRACR2BQ8N4Y2 399 aaPredicted RBP7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 MZB1Q8WU39 189 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 RCC1LQ96I51 464 aaKnown RBP7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 CHMP4AQ9BY43 222 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 BACE2Q9Y5Z0 518 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 NFAT5O94916 1531 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 PHRF1Q9P1Y6 1649 aaKnown RBP7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 PIK3C2AO00443 1686 aa7.41□□□□□ -1.22
CDKN1B-204ENST00000477087 TACR1P25103 407 aa7.4□□□□□ -1.22
CDKN1B-204ENST00000477087 MAPKAPK2P49137 400 aa7.4□□□□□ -1.22
CDKN1B-204ENST00000477087 RRP1P56182 461 aaKnown RBP7.4□□□□□ -1.22
CDKN1B-204ENST00000477087 NBPF6Q5VWK0 638 aa7.4□□□□□ -1.22
CDKN1B-204ENST00000477087 PAQR3Q6TCH7 311 aa7.4□□□□□ -1.22
CDKN1B-204ENST00000477087 ARHGEF39Q8N4T4 335 aa7.4□□□□□ -1.22
CDKN1B-204ENST00000477087 FAM169BQ8N8A8 192 aa7.4□□□□□ -1.22
CDKN1B-204ENST00000477087 NBPF4Q96M43 638 aa7.4□□□□□ -1.22
CDKN1B-204ENST00000477087 APBA2Q99767 749 aa7.4□□□□□ -1.22
CDKN1B-204ENST00000477087 DBR1Q9UK59 544 aaKnown RBP7.4□□□□□ -1.22
CDKN1B-204ENST00000477087 AKT3Q9Y243 479 aa7.4□□□□□ -1.22
CDKN1B-204ENST00000477087 C2orf71A6NGG8 1288 aa7.39□□□□□ -1.23
CDKN1B-204ENST00000477087 SRGAP3O43295 1099 aa7.39□□□□□ -1.23
CDKN1B-204ENST00000477087 CYBBP04839 570 aa7.39□□□□□ -1.23
CDKN1B-204ENST00000477087 DBHP09172 617 aa7.39□□□□□ -1.23
CDKN1B-204ENST00000477087 NCAPHQ15003 741 aa7.39□□□□□ -1.23
CDKN1B-204ENST00000477087 MTHFSDQ2M296 383 aaKnown RBP7.39□□□□□ -1.23
CDKN1B-204ENST00000477087 PLEKHN1Q494U1 663 aaPredicted RBP7.39□□□□□ -1.23
CDKN1B-204ENST00000477087 PLEKHO1Q53GL0 409 aaPredicted RBP7.39□□□□□ -1.23
CDKN1B-204ENST00000477087 CABP7Q86V35 215 aa7.39□□□□□ -1.23
CDKN1B-204ENST00000477087 LDHDQ86WU2 507 aa7.39□□□□□ -1.23
CDKN1B-204ENST00000477087 ARHGAP45Q92619 1136 aa7.39□□□□□ -1.23
CDKN1B-204ENST00000477087 PPP1R14AQ96A00 147 aa7.39□□□□□ -1.23
CDKN1B-204ENST00000477087 MCMBPQ9BTE3 642 aa7.39□□□□□ -1.23
CDKN1B-204ENST00000477087 RRP7AQ9Y3A4 280 aaKnown RBP7.39□□□□□ -1.23
CDKN1B-204ENST00000477087 MAP2P11137 1827 aaKnown RBP7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 MED1Q15648 1581 aaPredicted RBP7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 KIAA0232Q92628 1395 aa7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 TRBV23OR9-2A0A075B6M9 112 aa7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 NOP56O00567 594 aaKnown RBP7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 TCF3P15923 654 aa7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 PFKLP17858 780 aa7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 PAMP19021 973 aa7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 ZNF143P52747 638 aaPredicted RBP7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 RARSP54136 660 aaKnown RBP7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 TNNI3KQ59H18 835 aa7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 POMZP3Q6PJE2 187 aa7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 NLGN2Q8NFZ4 835 aa7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 RTF1Q92541 710 aaKnown RBP7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 SUSD2Q9UGT4 822 aa7.38□□□□□ -1.23
CDKN1B-204ENST00000477087 RGPD8O14715 1765 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms