RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 ANGPT1Q15389 498 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 ST3GAL2Q16842 350 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 KCNV1Q6PIU1 500 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 ZC3H14Q6PJT7 736 aaKnown RBP8.62□□□□□ -1.03
PRPF3-205ENST00000476970 RASGRP2Q7LDG7 609 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 CCDC105Q8IYK2 499 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 KLHL23Q8NBE8 558 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 SPPL3Q8TCT6 385 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 ZNF689Q96CS4 500 aaPredicted RBP8.62□□□□□ -1.03
PRPF3-205ENST00000476970 NECTIN4Q96NY8 510 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 TSHZ2Q9NRE2 1034 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 DLL3Q9NYJ7 618 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 MRPL42Q9Y6G3 142 aaKnown RBP8.62□□□□□ -1.03
PRPF3-205ENST00000476970 ZFHX4Q86UP3 3567 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 TREHO43280 583 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 HMMRO75330 724 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 EIF3JO75822 258 aaKnown RBP8.61□□□□□ -1.03
PRPF3-205ENST00000476970 DGKIO75912 1065 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 BRD1O95696 1058 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 ZFYP08048 801 aaPredicted RBP8.61□□□□□ -1.03
PRPF3-205ENST00000476970 SMIM10L2AP0DMW4 78 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 SMIM10L2BP0DMW5 78 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 HOXB8P17481 243 aaPredicted RBP8.61□□□□□ -1.03
PRPF3-205ENST00000476970 AOC1P19801 751 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 SDHBP21912 280 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 SP100P23497 879 aaPredicted RBP8.61□□□□□ -1.03
PRPF3-205ENST00000476970 DNAJB1P25685 340 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 PPARAQ07869 468 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 PDE12Q6L8Q7 609 aaKnown RBP8.61□□□□□ -1.03
PRPF3-205ENST00000476970 POTEGQ6S5H5 508 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 MCF2L2Q86YR7 1114 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 MICAL1Q8TDZ2 1067 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 ATP8B4Q8TF62 1192 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 SPATA33Q96N06 139 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 PHF12Q96QT6 1004 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 RMDN3Q96TC7 470 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 RTP3Q9BQQ7 232 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 NAPBQ9H115 298 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 BCL11AQ9H165 835 aa8.61□□□□□ -1.03
PRPF3-205ENST00000476970 LOXHD1Q8IVV2 1947 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 ABCB11O95342 1321 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 PATL2C9JE40 543 aaKnown RBP8.6□□□□□ -1.03
PRPF3-205ENST00000476970 H3BRB1 525 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 RAB11FIP3O75154 756 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 STAG3L1P0CL83 205 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 TECP42680 631 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 HIC1Q14526 733 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 DUSP6Q16828 381 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 USH1GQ495M9 461 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 FAM26DQ5JW98 314 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 ARHGEF16Q5VV41 709 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 TTBK2Q6IQ55 1244 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 CES5AQ6NT32 575 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 ANKRD54Q6NXT1 300 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 RSPH3Q86UC2 560 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 IFNL3Q8IZI9 196 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 FLCNQ8NFG4 579 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 CYP2W1Q8TAV3 490 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 RUBCNQ92622 972 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 TUT1Q9H6E5 874 aaKnown RBP8.6□□□□□ -1.03
PRPF3-205ENST00000476970 GPCPD1Q9NPB8 672 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 AAASQ9NRG9 546 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 ZNF215Q9UL58 517 aaPredicted RBP8.6□□□□□ -1.03
PRPF3-205ENST00000476970 PCDHB12Q9Y5F1 795 aa8.6□□□□□ -1.03
PRPF3-205ENST00000476970 FNDC1Q4ZHG4 1894 aaPredicted RBP8.6□□□□□ -1.03
PRPF3-205ENST00000476970 ANKRD11Q6UB99 2663 aaPredicted RBP8.59□□□□□ -1.03
PRPF3-205ENST00000476970 FRMPD2Q68DX3 1309 aaPredicted RBP8.59□□□□□ -1.03
PRPF3-205ENST00000476970 NOP56O00567 594 aaKnown RBP8.59□□□□□ -1.03
PRPF3-205ENST00000476970 RNF113AO15541 343 aaKnown RBP8.59□□□□□ -1.03
PRPF3-205ENST00000476970 RANBP6O60518 1105 aaKnown RBP8.59□□□□□ -1.03
PRPF3-205ENST00000476970 GGPS1O95749 300 aa8.59□□□□□ -1.03
PRPF3-205ENST00000476970 LGALS2P05162 132 aa8.59□□□□□ -1.03
PRPF3-205ENST00000476970 GHRP10912 638 aa8.59□□□□□ -1.03
PRPF3-205ENST00000476970 TOP1P11387 765 aaKnown RBP8.59□□□□□ -1.03
PRPF3-205ENST00000476970 HSDL1Q3SXM5 330 aa8.59□□□□□ -1.03
PRPF3-205ENST00000476970 TPRNQ4KMQ1 711 aa8.59□□□□□ -1.03
PRPF3-205ENST00000476970 CELF3Q5SZQ8 465 aaKnown RBP8.59□□□□□ -1.03
PRPF3-205ENST00000476970 MYSM1Q5VVJ2 828 aa8.59□□□□□ -1.03
PRPF3-205ENST00000476970 CWF19L1Q69YN2 538 aaKnown RBP8.59□□□□□ -1.03
PRPF3-205ENST00000476970 TAF2Q6P1X5 1199 aa8.59□□□□□ -1.03
PRPF3-205ENST00000476970 TMEM184AQ6ZMB5 413 aa8.59□□□□□ -1.03
PRPF3-205ENST00000476970 NPAS4Q8IUM7 802 aa8.59□□□□□ -1.03
PRPF3-205ENST00000476970 KBTBD3Q8NAB2 608 aa8.59□□□□□ -1.03
PRPF3-205ENST00000476970 TDRD5Q8NAT2 981 aaKnown RBP8.59□□□□□ -1.03
PRPF3-205ENST00000476970 RASGRP4Q8TDF6 673 aa8.59□□□□□ -1.03
PRPF3-205ENST00000476970 SYTL5Q8TDW5 730 aaPredicted RBP8.59□□□□□ -1.03
PRPF3-205ENST00000476970 OSBP2Q969R2 916 aa8.59□□□□□ -1.03
PRPF3-205ENST00000476970 C16orf70Q9BSU1 422 aa8.59□□□□□ -1.03
PRPF3-205ENST00000476970 FTHL17Q9BXU8 183 aa8.59□□□□□ -1.03
PRPF3-205ENST00000476970 RNPEPQ9H4A4 650 aa8.59□□□□□ -1.03
PRPF3-205ENST00000476970 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.59□□□□□ -1.03
PRPF3-205ENST00000476970 DENND4AQ7Z401 1863 aa8.58□□□□□ -1.04
PRPF3-205ENST00000476970 DOCK5Q9H7D0 1870 aa8.58□□□□□ -1.04
PRPF3-205ENST00000476970 C2CD4DB7Z1M9 353 aa8.58□□□□□ -1.04
PRPF3-205ENST00000476970 ENPP3O14638 875 aa8.58□□□□□ -1.04
PRPF3-205ENST00000476970 PER2O15055 1255 aa8.58□□□□□ -1.04
PRPF3-205ENST00000476970 NMT2O60551 498 aa8.58□□□□□ -1.04
PRPF3-205ENST00000476970 RPLP2P05387 115 aaKnown RBP8.58□□□□□ -1.04
PRPF3-205ENST00000476970 NR3C2P08235 984 aa8.58□□□□□ -1.04
PRPF3-205ENST00000476970 TGFB3P10600 412 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms