RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 TTC28Q96AY4 2481 aa12.36□□□□□ -0.43
SEC13-214ENST00000476597 ABHD14A-ACY1A0A1B0GW23 586 aa12.35□□□□□ -0.43
SEC13-214ENST00000476597 EFCAB14O75071 495 aa12.35□□□□□ -0.43
SEC13-214ENST00000476597 LGR5O75473 907 aa12.35□□□□□ -0.43
SEC13-214ENST00000476597 CA3P07451 260 aa12.35□□□□□ -0.43
SEC13-214ENST00000476597 KCNJ6P48051 423 aa12.35□□□□□ -0.43
SEC13-214ENST00000476597 CLK2P49760 499 aaKnown RBP12.35□□□□□ -0.43
SEC13-214ENST00000476597 ADCY7P51828 1080 aa12.35□□□□□ -0.43
SEC13-214ENST00000476597 IKBKEQ14164 716 aa12.35□□□□□ -0.43
SEC13-214ENST00000476597 PFKFB3Q16875 520 aaPredicted RBP12.35□□□□□ -0.43
SEC13-214ENST00000476597 USP38Q8NB14 1042 aa12.35□□□□□ -0.43
SEC13-214ENST00000476597 TMEM260Q9NX78 707 aa12.35□□□□□ -0.43
SEC13-214ENST00000476597 EMSYQ7Z589 1322 aa12.35□□□□□ -0.43
SEC13-214ENST00000476597 NRCAMQ92823 1304 aa12.35□□□□□ -0.43
SEC13-214ENST00000476597 MEIS1O00470 390 aa12.34□□□□□ -0.43
SEC13-214ENST00000476597 PRPF3O43395 683 aaKnown RBP12.34□□□□□ -0.43
SEC13-214ENST00000476597 CAND2O75155 1236 aa12.34□□□□□ -0.43
SEC13-214ENST00000476597 ARP10275 920 aa12.34□□□□□ -0.43
SEC13-214ENST00000476597 SREBF1P36956 1147 aa12.34□□□□□ -0.43
SEC13-214ENST00000476597 EVCP57679 992 aa12.34□□□□□ -0.43
SEC13-214ENST00000476597 AP3B2Q13367 1082 aa12.34□□□□□ -0.43
SEC13-214ENST00000476597 NTRK3Q16288 839 aa12.34□□□□□ -0.43
SEC13-214ENST00000476597 PKN1Q16512 942 aa12.34□□□□□ -0.43
SEC13-214ENST00000476597 CEP55Q53EZ4 464 aa12.34□□□□□ -0.43
SEC13-214ENST00000476597 DBF4BQ8NFT6 615 aa12.34□□□□□ -0.43
SEC13-214ENST00000476597 PGBD1Q96JS3 809 aa12.34□□□□□ -0.43
SEC13-214ENST00000476597 ANO3Q9BYT9 981 aa12.34□□□□□ -0.43
SEC13-214ENST00000476597 SMARCAD1Q9H4L7 1026 aa12.34□□□□□ -0.43
SEC13-214ENST00000476597 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
SEC13-214ENST00000476597 PKD2L1Q9P0L9 805 aa12.34□□□□□ -0.43
SEC13-214ENST00000476597 NID2Q14112 1375 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 RBAK-RBAKDNI3L0D1 243 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 TLL1O43897 1013 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 ARHGEF15O94989 841 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 NEFLP07196 543 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 SCG2P13521 617 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 POU3F3P20264 500 aaPredicted RBP12.33□□□□□ -0.44
SEC13-214ENST00000476597 IGFBP4P22692 258 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 DEFB103AP81534 67 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 ARHGAP4P98171 946 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 TAP1Q03518 808 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 MKRN4PQ13434 485 aaPredicted RBP12.33□□□□□ -0.44
SEC13-214ENST00000476597 PLEKHG4Q58EX7 1191 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 FAM26DQ5JW98 314 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 TMCO2Q7Z6W1 182 aaPredicted RBP12.33□□□□□ -0.44
SEC13-214ENST00000476597 RPAINQ86UA6 219 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 LMBR1Q8WVP7 490 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 CRYGNQ8WXF5 182 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 PCYT2Q99447 389 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 RAD9AQ99638 391 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 COL25A1Q9BXS0 654 aaPredicted RBP12.33□□□□□ -0.44
SEC13-214ENST00000476597 OSBPL7Q9BZF2 842 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 ZMYND12Q9H0C1 365 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 AGO4Q9HCK5 861 aaKnown RBP12.33□□□□□ -0.44
SEC13-214ENST00000476597 JPH1Q9HDC5 661 aaPredicted RBP12.33□□□□□ -0.44
SEC13-214ENST00000476597 ERAP1Q9NZ08 941 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 SLC9A2Q9UBY0 812 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 NFASCO94856 1347 aa12.33□□□□□ -0.44
SEC13-214ENST00000476597 ESYT2A0FGR8 921 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 RFXAPO00287 272 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 ADAMTS3O15072 1205 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 ATG7O95352 703 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 GJB5O95377 273 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 CYP3A4P08684 503 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 PDIA3P30101 505 aaKnown RBP12.32□□□□□ -0.44
SEC13-214ENST00000476597 PPFIA1Q13136 1202 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 ITGB3BPQ13352 177 aaPredicted RBP12.32□□□□□ -0.44
SEC13-214ENST00000476597 MARCH8Q5T0T0 291 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 JAKMIP3Q5VZ66 844 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.32□□□□□ -0.44
SEC13-214ENST00000476597 RUFY3Q7L099 469 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 NIPA1Q7RTP0 329 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 PPM1EQ8WY54 764 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 GLG1Q92896 1179 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 ZBED2Q9BTP6 218 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 CERS4Q9HA82 394 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 C6orf50Q9HD87 102 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 TET1Q8NFU7 2136 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 XIRP2A4UGR9 3374 aa12.32□□□□□ -0.44
SEC13-214ENST00000476597 LCHNA4D1U4 455 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 MBLAC1A4D2B0 266 aaPredicted RBP12.31□□□□□ -0.44
SEC13-214ENST00000476597 CHRNA1P02708 482 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 CTSHP09668 335 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 IFNAR1P17181 557 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 MARK3P27448 753 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 GNA11P29992 359 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 ZNF76P36508 570 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 ACTR2P61160 394 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 AKAP17AQ02040 695 aaKnown RBP12.31□□□□□ -0.44
SEC13-214ENST00000476597 TOB2Q14106 344 aaPredicted RBP12.31□□□□□ -0.44
SEC13-214ENST00000476597 CCDC85BQ15834 202 aaPredicted RBP12.31□□□□□ -0.44
SEC13-214ENST00000476597 GRIK4Q16099 956 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 MCTP2Q6DN12 878 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 TAF2Q6P1X5 1199 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 RUFY4Q6ZNE9 571 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 PLPPR4Q7Z2D5 763 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 CCDC12Q8WUD4 166 aaPredicted RBP12.31□□□□□ -0.44
SEC13-214ENST00000476597 PHKBQ93100 1093 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 SDF4Q9BRK5 362 aa12.31□□□□□ -0.44
SEC13-214ENST00000476597 RNF26Q9BY78 433 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms