RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 DPF3Q92784 378 aa16.29■□□□□ 0.2
CCNL1-217ENST00000476367 MTG1Q9BT17 334 aaPredicted RBP16.29■□□□□ 0.2
CCNL1-217ENST00000476367 SLC9A2Q9UBY0 812 aa16.29■□□□□ 0.2
CCNL1-217ENST00000476367 DDX25Q9UHL0 483 aaKnown RBP16.29■□□□□ 0.2
CCNL1-217ENST00000476367 ATP11BQ9Y2G3 1177 aa16.29■□□□□ 0.2
CCNL1-217ENST00000476367 CLIC4Q9Y696 253 aa16.29■□□□□ 0.2
CCNL1-217ENST00000476367 GCFC2P16383 781 aaKnown RBP16.28■□□□□ 0.2
CCNL1-217ENST00000476367 RTP1P59025 263 aa16.28■□□□□ 0.2
CCNL1-217ENST00000476367 PTPAQ15257 358 aa16.28■□□□□ 0.2
CCNL1-217ENST00000476367 IL17AQ16552 155 aa16.28■□□□□ 0.2
CCNL1-217ENST00000476367 TRIM60Q495X7 471 aa16.28■□□□□ 0.2
CCNL1-217ENST00000476367 RILPL1Q5EBL4 403 aa16.28■□□□□ 0.2
CCNL1-217ENST00000476367 USP28Q96RU2 1077 aa16.28■□□□□ 0.2
CCNL1-217ENST00000476367 GPR20Q99678 358 aa16.28■□□□□ 0.2
CCNL1-217ENST00000476367 NFASCO94856 1347 aa16.28■□□□□ 0.2
CCNL1-217ENST00000476367 A0A0U1RQG5 324 aaPredicted RBP16.27■□□□□ 0.2
CCNL1-217ENST00000476367 KPNA6O60684 536 aa16.27■□□□□ 0.2
CCNL1-217ENST00000476367 CABYRO75952 493 aa16.27■□□□□ 0.2
CCNL1-217ENST00000476367 TRIM50Q86XT4 487 aa16.27■□□□□ 0.2
CCNL1-217ENST00000476367 C7orf61Q8IZ16 206 aa16.27■□□□□ 0.2
CCNL1-217ENST00000476367 SLC5A5Q92911 643 aa16.27■□□□□ 0.2
CCNL1-217ENST00000476367 ELP1O95163 1332 aa16.27■□□□□ 0.2
CCNL1-217ENST00000476367 EVI5O60447 810 aa16.27■□□□□ 0.19
CCNL1-217ENST00000476367 PSMD10O75832 226 aa16.27■□□□□ 0.19
CCNL1-217ENST00000476367 LGALS2P05162 132 aa16.27■□□□□ 0.19
CCNL1-217ENST00000476367 HOXD8P13378 290 aaPredicted RBP16.27■□□□□ 0.19
CCNL1-217ENST00000476367 TCF7P36402 384 aaPredicted RBP16.27■□□□□ 0.19
CCNL1-217ENST00000476367 SPIRE1Q08AE8 756 aa16.27■□□□□ 0.19
CCNL1-217ENST00000476367 ITGA7Q13683 1181 aa16.27■□□□□ 0.19
CCNL1-217ENST00000476367 FOXD4L6Q3SYB3 417 aaPredicted RBP16.27■□□□□ 0.19
CCNL1-217ENST00000476367 FAM47CQ5HY64 1035 aa16.27■□□□□ 0.19
CCNL1-217ENST00000476367 UTP14CQ5TAP6 766 aaKnown RBP16.27■□□□□ 0.19
CCNL1-217ENST00000476367 FOXD4L3Q6VB84 417 aaPredicted RBP16.27■□□□□ 0.19
CCNL1-217ENST00000476367 TCEAL9Q9UHQ7 104 aa16.27■□□□□ 0.19
CCNL1-217ENST00000476367 CIZ1Q9ULV3 898 aaPredicted RBP16.27■□□□□ 0.19
CCNL1-217ENST00000476367 MYH9P35579 1960 aaKnown RBP16.26■□□□□ 0.19
CCNL1-217ENST00000476367 PQBP1O60828 265 aaKnown RBP16.26■□□□□ 0.19
CCNL1-217ENST00000476367 CCNE2O96020 404 aa16.26■□□□□ 0.19
CCNL1-217ENST00000476367 ACTR2P61160 394 aa16.26■□□□□ 0.19
CCNL1-217ENST00000476367 DNM1Q05193 864 aaKnown RBP16.26■□□□□ 0.19
CCNL1-217ENST00000476367 PTGDRQ13258 359 aa16.26■□□□□ 0.19
CCNL1-217ENST00000476367 SNX17Q15036 470 aa16.26■□□□□ 0.19
CCNL1-217ENST00000476367 LRCH2Q5VUJ6 765 aa16.26■□□□□ 0.19
CCNL1-217ENST00000476367 KAT2BQ92831 832 aa16.26■□□□□ 0.19
CCNL1-217ENST00000476367 NAP1L4Q99733 375 aaKnown RBP16.26■□□□□ 0.19
CCNL1-217ENST00000476367 TFIP11Q9UBB9 837 aaKnown RBP16.26■□□□□ 0.19
CCNL1-217ENST00000476367 DAXXQ9UER7 740 aaPredicted RBP16.26■□□□□ 0.19
CCNL1-217ENST00000476367 VAV3Q9UKW4 847 aa16.26■□□□□ 0.19
CCNL1-217ENST00000476367 GRIN2DO15399 1336 aa16.26■□□□□ 0.19
CCNL1-217ENST00000476367 CHMP2AO43633 222 aa16.25■□□□□ 0.19
CCNL1-217ENST00000476367 NEMFO60524 1076 aa16.25■□□□□ 0.19
CCNL1-217ENST00000476367 GAS7O60861 476 aa16.25■□□□□ 0.19
CCNL1-217ENST00000476367 PPFIA4O75335 1185 aa16.25■□□□□ 0.19
CCNL1-217ENST00000476367 F2P00734 622 aa16.25■□□□□ 0.19
CCNL1-217ENST00000476367 ATP2C1P98194 919 aaPredicted RBP16.25■□□□□ 0.19
CCNL1-217ENST00000476367 SF3A1Q15459 793 aaKnown RBP16.25■□□□□ 0.19
CCNL1-217ENST00000476367 NBPF20Q3BBV1 942 aa16.25■□□□□ 0.19
CCNL1-217ENST00000476367 SEPT1Q8WYJ6 367 aa16.25■□□□□ 0.19
CCNL1-217ENST00000476367 TBC1D22BQ9NU19 505 aa16.25■□□□□ 0.19
CCNL1-217ENST00000476367 NOL7Q9UMY1 257 aaKnown RBP16.25■□□□□ 0.19
CCNL1-217ENST00000476367 KAT6AQ92794 2004 aa16.25■□□□□ 0.19
CCNL1-217ENST00000476367 TRIP12Q14669 1992 aaPredicted RBP16.24■□□□□ 0.19
CCNL1-217ENST00000476367 GSTTP1A0A1W2PQM5 241 aa16.24■□□□□ 0.19
CCNL1-217ENST00000476367 ARVCFO00192 962 aa16.24■□□□□ 0.19
CCNL1-217ENST00000476367 NASPP49321 788 aaPredicted RBP16.24■□□□□ 0.19
CCNL1-217ENST00000476367 PSEN2P49810 448 aa16.24■□□□□ 0.19
CCNL1-217ENST00000476367 NUCB2P80303 420 aa16.24■□□□□ 0.19
CCNL1-217ENST00000476367 GRIN1Q05586 938 aa16.24■□□□□ 0.19
CCNL1-217ENST00000476367 MFSD10Q14728 455 aa16.24■□□□□ 0.19
CCNL1-217ENST00000476367 KIAA0753Q2KHM9 967 aa16.24■□□□□ 0.19
CCNL1-217ENST00000476367 C16orf70Q9BSU1 422 aa16.24■□□□□ 0.19
CCNL1-217ENST00000476367 KATNAL1Q9BW62 490 aa16.24■□□□□ 0.19
CCNL1-217ENST00000476367 TEKT3Q9BXF9 490 aa16.24■□□□□ 0.19
CCNL1-217ENST00000476367 PCDH10Q9P2E7 1040 aa16.24■□□□□ 0.19
CCNL1-217ENST00000476367 H3BRB1 525 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 TBX3O15119 743 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 MARCH6O60337 910 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 TLE2Q04725 743 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 ORC2Q13416 577 aaPredicted RBP16.23■□□□□ 0.19
CCNL1-217ENST00000476367 CALCRLQ16602 461 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 C1orf53Q5VUE5 145 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 FAM20AQ96MK3 541 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 RIT2Q99578 217 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 TUT1Q9H6E5 874 aaKnown RBP16.23■□□□□ 0.19
CCNL1-217ENST00000476367 CHMP5Q9NZZ3 219 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 SAMM50Q9Y512 469 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 MROH7Q68CQ1 1323 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 CEP290O15078 2479 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 EML1O00423 815 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 MARK3P27448 753 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 KRT76Q01546 638 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 CEBPZQ03701 1054 aaKnown RBP16.23■□□□□ 0.19
CCNL1-217ENST00000476367 LINC00301Q8NCQ3 95 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 GLG1Q92896 1179 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 UNC45AQ9H3U1 944 aa16.23■□□□□ 0.19
CCNL1-217ENST00000476367 PRDM5Q9NQX1 630 aaPredicted RBP16.23■□□□□ 0.19
CCNL1-217ENST00000476367 ZNF215Q9UL58 517 aaPredicted RBP16.23■□□□□ 0.19
CCNL1-217ENST00000476367 ZMYND8Q9ULU4 1186 aaPredicted RBP16.23■□□□□ 0.19
CCNL1-217ENST00000476367 LTBP2Q14767 1821 aa16.22■□□□□ 0.19
CCNL1-217ENST00000476367 BACH1O14867 736 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms