RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 STRBPQ96SI9 672 aaKnown RBP11.53□□□□□ -0.56
ABCF1-205ENST00000475993 TRIM7Q9C029 511 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 PCMTD2Q9NV79 361 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 TJP1Q07157 1748 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 NKRFO15226 690 aaKnown RBP eCLIP11.53□□□□□ -0.56
ABCF1-205ENST00000475993 FTCDO95954 541 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 ATP2A2P16615 1042 aaKnown RBP11.53□□□□□ -0.56
ABCF1-205ENST00000475993 CCNE1P24864 410 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 STAT6P42226 847 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 MCAMP43121 646 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 GJA8P48165 433 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 MAP3K12Q12852 859 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 GALNTL6Q49A17 601 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 Q4G0T1 1027 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 NAALADL2Q58DX5 795 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 MEX3CQ5U5Q3 659 aaKnown RBP11.53□□□□□ -0.56
ABCF1-205ENST00000475993 TMC3Q7Z5M5 1100 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 DDX42Q86XP3 938 aaKnown RBP eCLIP11.53□□□□□ -0.56
ABCF1-205ENST00000475993 SCFD2Q8WU76 684 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 PRCCQ92733 491 aaPredicted RBP11.53□□□□□ -0.56
ABCF1-205ENST00000475993 P2RX5Q93086 422 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 EEF2KMTQ96G04 330 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 MTA3Q9BTC8 594 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 LRRC4CQ9HCJ2 640 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 EPB41L4AQ9HCS5 686 aaPredicted RBP11.53□□□□□ -0.56
ABCF1-205ENST00000475993 C2CD2Q9Y426 696 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 BICDL2A1A5D9 508 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 LRRC53A6NM62 1247 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 F8VZ95 297 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 MMEP08473 750 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 POLE2P56282 527 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 NAB2Q15742 525 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 KIAA0753Q2KHM9 967 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 CCDC57Q2TAC2 916 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 ANKRD40Q6AI12 368 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 BAP1Q92560 729 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 NAF1Q96HR8 494 aaKnown RBP11.53□□□□□ -0.56
ABCF1-205ENST00000475993 ZKSCAN3Q9BRR0 538 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 CCDC134Q9H6E4 229 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 SLC52A2Q9HAB3 445 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 DISC1Q9NRI5 854 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 ABCF3Q9NUQ8 709 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 SAMD15Q9P1V8 674 aa11.53□□□□□ -0.56
ABCF1-205ENST00000475993 ZNF532Q9HCE3 1301 aa11.52□□□□□ -0.56
ABCF1-205ENST00000475993 GOLGA6L10A0A0M3HER8 536 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 IGF2BP3O00425 579 aaKnown RBP eCLIP11.52□□□□□ -0.57
ABCF1-205ENST00000475993 ABLIM1O14639 778 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 MAP3K13O43283 966 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 EVI5O60447 810 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 UBOX5O94941 541 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 SNRPA1P09661 255 aaKnown RBP11.52□□□□□ -0.57
ABCF1-205ENST00000475993 CHN1P15882 459 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 LONP1P36776 959 aaKnown RBP11.52□□□□□ -0.57
ABCF1-205ENST00000475993 DNA2P51530 1060 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 ZNF131P52739 623 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 RNASE9P60153 205 aaKnown RBP11.52□□□□□ -0.57
ABCF1-205ENST00000475993 FUT2Q10981 343 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 CYB5RLQ6IPT4 315 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 TMC4Q7Z404 712 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 APLFQ8IW19 511 aaPredicted RBP11.52□□□□□ -0.57
ABCF1-205ENST00000475993 LRRC34Q8IZ02 419 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 STAG2Q8N3U4 1231 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 FAM207AQ9NSI2 230 aaPredicted RBP11.52□□□□□ -0.57
ABCF1-205ENST00000475993 CWC25Q9NXE8 425 aaPredicted RBP11.52□□□□□ -0.57
ABCF1-205ENST00000475993 TMOD4Q9NZQ9 345 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 SPATA7Q9P0W8 599 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 PRDM1O75626 825 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 CYP11B2P19099 503 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 MMP13P45452 471 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 ARL6IP4Q66PJ3 421 aaKnown RBP11.52□□□□□ -0.57
ABCF1-205ENST00000475993 HGSNATQ68CP4 663 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 MFSD6Q6ZSS7 791 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 RRAGAQ7L523 313 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 TMEM110Q86TL2 294 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 ANKLE2Q86XL3 938 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 IFNL3Q8IZI9 196 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 ADAM7Q9H2U9 754 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 ARHGEF3Q9NR81 526 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 ADAM22Q9P0K1 906 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 PNMA2Q9UL42 364 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 AMOTL2Q9Y2J4 779 aa11.52□□□□□ -0.57
ABCF1-205ENST00000475993 GPR75-ASB3A0A0A6YYF3 556 aa11.51□□□□□ -0.57
ABCF1-205ENST00000475993 TCRBV5S4A2TA0A5A2 114 aa11.51□□□□□ -0.57
ABCF1-205ENST00000475993 SPDYE5A6NIY4 337 aa11.51□□□□□ -0.57
ABCF1-205ENST00000475993 PRPF3O43395 683 aaKnown RBP11.51□□□□□ -0.57
ABCF1-205ENST00000475993 KRT16P08779 473 aa11.51□□□□□ -0.57
ABCF1-205ENST00000475993 TRAPPC10P48553 1259 aa11.51□□□□□ -0.57
ABCF1-205ENST00000475993 EIF3BP55884 814 aaKnown RBP11.51□□□□□ -0.57
ABCF1-205ENST00000475993 EHHADHQ08426 723 aa11.51□□□□□ -0.57
ABCF1-205ENST00000475993 PPP2R5BQ15173 497 aa11.51□□□□□ -0.57
ABCF1-205ENST00000475993 TAF11Q15544 211 aa11.51□□□□□ -0.57
ABCF1-205ENST00000475993 CCDC38Q502W7 563 aa11.51□□□□□ -0.57
ABCF1-205ENST00000475993 ELAC2Q9BQ52 826 aaKnown RBP11.51□□□□□ -0.57
ABCF1-205ENST00000475993 ECT2Q9H8V3 914 aa11.51□□□□□ -0.57
ABCF1-205ENST00000475993 PIH1D3Q9NQM4 214 aaKnown RBP11.51□□□□□ -0.57
ABCF1-205ENST00000475993 PACSIN2Q9UNF0 486 aaPredicted RBP11.51□□□□□ -0.57
ABCF1-205ENST00000475993 ASB3Q9Y575 518 aa11.51□□□□□ -0.57
ABCF1-205ENST00000475993 LRRD1A4D1F6 860 aa11.51□□□□□ -0.57
ABCF1-205ENST00000475993 A8MUI8 341 aa11.51□□□□□ -0.57
ABCF1-205ENST00000475993 NPM3O75607 178 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms