RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 GTF2IRD1Q9UHL9 959 aa12.19□□□□□ -0.46
CALD1-217ENST00000475772 B4DLN1 442 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 KIF28PB7ZC32 967 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 BAIAP3O94812 1187 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 IGHDP01880 384 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 NR3C2P08235 984 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 CKBP12277 381 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 SELPP16109 830 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 CASTP20810 708 aaKnown RBP12.18□□□□□ -0.46
CALD1-217ENST00000475772 MRPL12P52815 198 aaKnown RBP12.18□□□□□ -0.46
CALD1-217ENST00000475772 MBTPS1Q14703 1052 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 STXBP2Q15833 593 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 SLC35G1Q2M3R5 365 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 STAG2Q8N3U4 1231 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 ENAHQ8N8S7 591 aaPredicted RBP12.18□□□□□ -0.46
CALD1-217ENST00000475772 CAGE1Q8TC20 777 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 AFAP1L1Q8TED9 768 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 MTMR8Q96EF0 704 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 RMDN3Q96TC7 470 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 MPHOSPH6Q99547 160 aaKnown RBP12.18□□□□□ -0.46
CALD1-217ENST00000475772 IL25Q9H293 177 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 EPHX3Q9H6B9 360 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 MICAL3Q7RTP6 2002 aa12.18□□□□□ -0.46
CALD1-217ENST00000475772 COL4A4P53420 1690 aaPredicted RBP12.17□□□□□ -0.46
CALD1-217ENST00000475772 PPP1R11O60927 126 aaPredicted RBP12.17□□□□□ -0.46
CALD1-217ENST00000475772 EIF3JO75822 258 aaKnown RBP12.17□□□□□ -0.46
CALD1-217ENST00000475772 EIF2AK2P19525 551 aaKnown RBP12.17□□□□□ -0.46
CALD1-217ENST00000475772 HSD17B4P51659 736 aa12.17□□□□□ -0.46
CALD1-217ENST00000475772 SP2Q02086 613 aa12.17□□□□□ -0.46
CALD1-217ENST00000475772 GHRHRQ02643 423 aa12.17□□□□□ -0.46
CALD1-217ENST00000475772 B4GALNT3Q6L9W6 998 aa12.17□□□□□ -0.46
CALD1-217ENST00000475772 CWC27Q6UX04 472 aaKnown RBP12.17□□□□□ -0.46
CALD1-217ENST00000475772 LRRC8DQ7L1W4 858 aa12.17□□□□□ -0.46
CALD1-217ENST00000475772 FBXO11Q86XK2 927 aa12.17□□□□□ -0.46
CALD1-217ENST00000475772 PRR7Q8TB68 274 aa12.17□□□□□ -0.46
CALD1-217ENST00000475772 EMID1Q96A84 441 aaPredicted RBP12.17□□□□□ -0.46
CALD1-217ENST00000475772 ZSCAN10Q96SZ4 725 aaPredicted RBP12.17□□□□□ -0.46
CALD1-217ENST00000475772 ALG1Q9BT22 464 aa12.17□□□□□ -0.46
CALD1-217ENST00000475772 BCAS3Q9H6U6 928 aa12.17□□□□□ -0.46
CALD1-217ENST00000475772 KAT14Q9H8E8 782 aa12.17□□□□□ -0.46
CALD1-217ENST00000475772 SUGCTQ9HAC7 445 aa12.17□□□□□ -0.46
CALD1-217ENST00000475772 PXMP2Q9NR77 195 aa12.17□□□□□ -0.46
CALD1-217ENST00000475772 NOD1Q9Y239 953 aa12.17□□□□□ -0.46
CALD1-217ENST00000475772 DOCK5Q9H7D0 1870 aa12.17□□□□□ -0.46
CALD1-217ENST00000475772 SIP14410 1827 aa12.16□□□□□ -0.46
CALD1-217ENST00000475772 HOXD8P13378 290 aaPredicted RBP12.16□□□□□ -0.46
CALD1-217ENST00000475772 JUNDP17535 347 aa12.16□□□□□ -0.46
CALD1-217ENST00000475772 SEC23AQ15436 765 aa12.16□□□□□ -0.46
CALD1-217ENST00000475772 DGKDQ16760 1214 aa12.16□□□□□ -0.46
CALD1-217ENST00000475772 ASPRV1Q53RT3 343 aa12.16□□□□□ -0.46
CALD1-217ENST00000475772 CCDC178Q5BJE1 867 aa12.16□□□□□ -0.46
CALD1-217ENST00000475772 ZNF618Q5T7W0 954 aa12.16□□□□□ -0.46
CALD1-217ENST00000475772 ARHGEF16Q5VV41 709 aa12.16□□□□□ -0.46
CALD1-217ENST00000475772 CNKSR3Q6P9H4 555 aa12.16□□□□□ -0.46
CALD1-217ENST00000475772 IQCA1Q86XH1 822 aa12.16□□□□□ -0.46
CALD1-217ENST00000475772 MCF2L2Q86YR7 1114 aa12.16□□□□□ -0.46
CALD1-217ENST00000475772 GPKOWQ92917 476 aaPredicted RBP eCLIP12.16□□□□□ -0.46
CALD1-217ENST00000475772 DSCC1Q9BVC3 393 aa12.16□□□□□ -0.46
CALD1-217ENST00000475772 OSBPL7Q9BZF2 842 aa12.16□□□□□ -0.46
CALD1-217ENST00000475772 COG5Q9UP83 839 aa12.16□□□□□ -0.46
CALD1-217ENST00000475772 MRPL11Q9Y3B7 192 aaKnown RBP12.16□□□□□ -0.46
CALD1-217ENST00000475772 KAT6AQ92794 2004 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 CFAP99D6REC4 459 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 GJB5O95377 273 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 F2P00734 622 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 CFBP00751 764 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 PARP1P09874 1014 aaKnown RBP12.15□□□□□ -0.46
CALD1-217ENST00000475772 PTK7Q13308 1070 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 LAMC2Q13753 1193 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 KIAA0753Q2KHM9 967 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 AAK1Q2M2I8 961 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 HSDL1Q3SXM5 330 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.15□□□□□ -0.46
CALD1-217ENST00000475772 STOX1Q6ZVD7 989 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 CYB5R4Q7L1T6 521 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 VSIG10LQ86VR7 867 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 CHD1LQ86WJ1 897 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 PPTC7Q8NI37 304 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 GDPD5Q8WTR4 605 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 PDCD2LQ9BRP1 358 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 C16orf70Q9BSU1 422 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 CD320Q9NPF0 282 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 LMCD1Q9NZU5 365 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 MAD2L2Q9UI95 211 aa12.15□□□□□ -0.46
CALD1-217ENST00000475772 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.14□□□□□ -0.47
CALD1-217ENST00000475772 ABHD14A-ACY1A0A1B0GW23 586 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 LINC01553A4QN01 128 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 PALM3A6NDB9 673 aaPredicted RBP12.14□□□□□ -0.47
CALD1-217ENST00000475772 SORBS3O60504 671 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 PARNO95453 639 aaKnown RBP12.14□□□□□ -0.47
CALD1-217ENST00000475772 ZNF286BP0CG31 522 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 KCNJ6P48051 423 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 NT5C2P49902 561 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 MFAP1P55081 439 aaKnown RBP12.14□□□□□ -0.47
CALD1-217ENST00000475772 ERVK-21P61565 698 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 NUCB1Q02818 461 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 PLA2G2CQ5R387 149 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 CELF3Q5SZQ8 465 aaKnown RBP12.14□□□□□ -0.47
CALD1-217ENST00000475772 DESI1Q6ICB0 168 aa12.14□□□□□ -0.47
CALD1-217ENST00000475772 DHX37Q8IY37 1157 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms