RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 GPR20Q99678 358 aa14.57□□□□□ -0.08
SKA3-206ENST00000475251 PLVAPQ9BX97 442 aa14.57□□□□□ -0.08
SKA3-206ENST00000475251 LNPKQ9C0E8 428 aa14.57□□□□□ -0.08
SKA3-206ENST00000475251 SETD4Q9NVD3 440 aa14.57□□□□□ -0.08
SKA3-206ENST00000475251 MAD2L2Q9UI95 211 aa14.57□□□□□ -0.08
SKA3-206ENST00000475251 PALM3A6NDB9 673 aaPredicted RBP14.56□□□□□ -0.08
SKA3-206ENST00000475251 SPATA31C2B4DYI2 1134 aa14.56□□□□□ -0.08
SKA3-206ENST00000475251 IRS1P35568 1242 aa14.56□□□□□ -0.08
SKA3-206ENST00000475251 ARHGAP4P98171 946 aa14.56□□□□□ -0.08
SKA3-206ENST00000475251 TRDNQ13061 729 aa14.56□□□□□ -0.08
SKA3-206ENST00000475251 SMAD4Q13485 552 aaKnown RBP14.56□□□□□ -0.08
SKA3-206ENST00000475251 HERC4Q5GLZ8 1057 aaPredicted RBP14.56□□□□□ -0.08
SKA3-206ENST00000475251 CYFIP1Q7L576 1253 aa14.56□□□□□ -0.08
SKA3-206ENST00000475251 GIMAP8Q8ND71 665 aaPredicted RBP14.56□□□□□ -0.08
SKA3-206ENST00000475251 GPKOWQ92917 476 aaPredicted RBP eCLIP14.56□□□□□ -0.08
SKA3-206ENST00000475251 CLP1Q92989 425 aaKnown RBP14.56□□□□□ -0.08
SKA3-206ENST00000475251 RIOX1Q9H6W3 641 aa14.56□□□□□ -0.08
SKA3-206ENST00000475251 PNMA6FA0A0J9YX94 578 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 ERICH2A1L162 156 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 MBTPS2O43462 519 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 MMP1P03956 469 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 LTBRP36941 435 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 ADAM17P78536 824 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 HYAL1Q12794 435 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 BTG3Q14201 252 aaPredicted RBP14.55□□□□□ -0.08
SKA3-206ENST00000475251 SEC23AQ15436 765 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 PKN1Q16512 942 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 XRRA1Q6P2D8 792 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 HFE2Q6ZVN8 426 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 LMBR1Q8WVP7 490 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 PIGSQ96S52 555 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 PRRX2Q99811 253 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 SENP7Q9BQF6 1050 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 OSBPL3Q9H4L5 887 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 CD207Q9UJ71 328 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 FRMPD4Q14CM0 1322 aa14.55□□□□□ -0.08
SKA3-206ENST00000475251 GRM6O15303 877 aa14.54□□□□□ -0.08
SKA3-206ENST00000475251 GHRP10912 638 aa14.54□□□□□ -0.08
SKA3-206ENST00000475251 RRP1P56182 461 aaKnown RBP14.54□□□□□ -0.08
SKA3-206ENST00000475251 MRPS9P82933 396 aaKnown RBP14.54□□□□□ -0.08
SKA3-206ENST00000475251 AAMPQ13685 434 aa14.54□□□□□ -0.08
SKA3-206ENST00000475251 GRM4Q14833 912 aa14.54□□□□□ -0.08
SKA3-206ENST00000475251 NAALADL2Q58DX5 795 aa14.54□□□□□ -0.08
SKA3-206ENST00000475251 UTP14CQ5TAP6 766 aaKnown RBP14.54□□□□□ -0.08
SKA3-206ENST00000475251 NLRX1Q86UT6 975 aa14.54□□□□□ -0.08
SKA3-206ENST00000475251 CUL5Q93034 780 aa14.54□□□□□ -0.08
SKA3-206ENST00000475251 P2RX5Q93086 422 aa14.54□□□□□ -0.08
SKA3-206ENST00000475251 ZFP91Q96JP5 570 aaPredicted RBP14.54□□□□□ -0.08
SKA3-206ENST00000475251 EHMT1Q9H9B1 1298 aa14.54□□□□□ -0.08
SKA3-206ENST00000475251 RC3H2Q9HBD1 1191 aaKnown RBP14.54□□□□□ -0.08
SKA3-206ENST00000475251 STXBP3O00186 592 aa14.53□□□□□ -0.08
SKA3-206ENST00000475251 CHRNA1P02708 482 aa14.53□□□□□ -0.08
SKA3-206ENST00000475251 NDUFV1P49821 464 aa14.53□□□□□ -0.08
SKA3-206ENST00000475251 SART3Q15020 963 aaKnown RBP14.53□□□□□ -0.08
SKA3-206ENST00000475251 CLUL1Q15846 466 aa14.53□□□□□ -0.08
SKA3-206ENST00000475251 PCNX4Q63HM2 1172 aa14.53□□□□□ -0.08
SKA3-206ENST00000475251 TRIM50Q86XT4 487 aa14.53□□□□□ -0.08
SKA3-206ENST00000475251 RNF135Q8IUD6 432 aa14.53□□□□□ -0.08
SKA3-206ENST00000475251 SMARCC2Q8TAQ2 1214 aa14.53□□□□□ -0.08
SKA3-206ENST00000475251 EDAQ92838 391 aa14.53□□□□□ -0.08
SKA3-206ENST00000475251 CDHR1Q96JP9 859 aa14.53□□□□□ -0.08
SKA3-206ENST00000475251 FTHL17Q9BXU8 183 aa14.53□□□□□ -0.08
SKA3-206ENST00000475251 OSBPL7Q9BZF2 842 aa14.53□□□□□ -0.08
SKA3-206ENST00000475251 IGFLR1Q9H665 355 aa14.53□□□□□ -0.08
SKA3-206ENST00000475251 RTEL1Q9NZ71 1219 aa14.53□□□□□ -0.08
SKA3-206ENST00000475251 MUTYHQ9UIF7 546 aa14.53□□□□□ -0.08
SKA3-206ENST00000475251 ENPP3O14638 875 aa14.52□□□□□ -0.09
SKA3-206ENST00000475251 LINC00271P0C7V0 271 aa14.52□□□□□ -0.09
SKA3-206ENST00000475251 SP4Q02446 784 aa14.52□□□□□ -0.09
SKA3-206ENST00000475251 DLX2Q07687 328 aaPredicted RBP14.52□□□□□ -0.09
SKA3-206ENST00000475251 PPFIA1Q13136 1202 aa14.52□□□□□ -0.09
SKA3-206ENST00000475251 TSHZ1Q6ZSZ6 1077 aa14.52□□□□□ -0.09
SKA3-206ENST00000475251 BMP8AQ7Z5Y6 402 aa14.52□□□□□ -0.09
SKA3-206ENST00000475251 TNPO1Q92973 898 aaKnown RBP14.52□□□□□ -0.09
SKA3-206ENST00000475251 ZNF689Q96CS4 500 aaPredicted RBP14.52□□□□□ -0.09
SKA3-206ENST00000475251 RWDD1Q9H446 243 aaPredicted RBP14.52□□□□□ -0.09
SKA3-206ENST00000475251 BCAS3Q9H6U6 928 aa14.52□□□□□ -0.09
SKA3-206ENST00000475251 ERAP1Q9NZ08 941 aa14.52□□□□□ -0.09
SKA3-206ENST00000475251 TUBE1Q9UJT0 475 aa14.52□□□□□ -0.09
SKA3-206ENST00000475251 KAT6AQ92794 2004 aa14.52□□□□□ -0.09
SKA3-206ENST00000475251 FSD2A1L4K1 749 aa14.51□□□□□ -0.09
SKA3-206ENST00000475251 M0QZ92 97 aa14.51□□□□□ -0.09
SKA3-206ENST00000475251 IFIT3O14879 490 aaKnown RBP14.51□□□□□ -0.09
SKA3-206ENST00000475251 TBX10O75333 385 aa14.51□□□□□ -0.09
SKA3-206ENST00000475251 DGKIO75912 1065 aa14.51□□□□□ -0.09
SKA3-206ENST00000475251 TCF7P36402 384 aaPredicted RBP14.51□□□□□ -0.09
SKA3-206ENST00000475251 PTPN5P54829 565 aa14.51□□□□□ -0.09
SKA3-206ENST00000475251 MGAT3Q09327 533 aa14.51□□□□□ -0.09
SKA3-206ENST00000475251 SEMA3FQ13275 785 aa14.51□□□□□ -0.09
SKA3-206ENST00000475251 ADAM15Q13444 863 aa14.51□□□□□ -0.09
SKA3-206ENST00000475251 LPIN1Q14693 890 aa14.51□□□□□ -0.09
SKA3-206ENST00000475251 FBXO47Q5MNV8 452 aa14.51□□□□□ -0.09
SKA3-206ENST00000475251 FAM43BQ6ZT52 329 aaPredicted RBP14.51□□□□□ -0.09
SKA3-206ENST00000475251 CHD1LQ86WJ1 897 aa14.51□□□□□ -0.09
SKA3-206ENST00000475251 PLEKHM2Q8IWE5 1019 aa14.51□□□□□ -0.09
SKA3-206ENST00000475251 SUGP1Q8IWZ8 645 aaKnown RBP14.51□□□□□ -0.09
SKA3-206ENST00000475251 SMC5Q8IY18 1101 aa14.51□□□□□ -0.09
SKA3-206ENST00000475251 CMTR2Q8IYT2 770 aaKnown RBP14.51□□□□□ -0.09
SKA3-206ENST00000475251 PLAGL2Q9UPG8 496 aa14.51□□□□□ -0.09
SKA3-206ENST00000475251 SQORQ9Y6N5 450 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms