RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 DOCK5Q9H7D0 1870 aa19.18■□□□□ 0.66
SCAF11-206ENST00000474828 NOP56O00567 594 aaKnown RBP19.18■□□□□ 0.66
SCAF11-206ENST00000474828 FOSBP53539 338 aa19.18■□□□□ 0.66
SCAF11-206ENST00000474828 ATN1P54259 1190 aaPredicted RBP19.18■□□□□ 0.66
SCAF11-206ENST00000474828 KRT76Q01546 638 aa19.18■□□□□ 0.66
SCAF11-206ENST00000474828 NBPF20Q3BBV1 942 aa19.18■□□□□ 0.66
SCAF11-206ENST00000474828 FAM126BQ8IXS8 530 aa19.18■□□□□ 0.66
SCAF11-206ENST00000474828 SMAP1Q8IYB5 467 aaPredicted RBP19.18■□□□□ 0.66
SCAF11-206ENST00000474828 PCYT2Q99447 389 aa19.18■□□□□ 0.66
SCAF11-206ENST00000474828 H3BRB1 525 aa19.17■□□□□ 0.66
SCAF11-206ENST00000474828 CCNT1O60563 726 aaKnown RBP19.17■□□□□ 0.66
SCAF11-206ENST00000474828 TCF7P36402 384 aaPredicted RBP19.17■□□□□ 0.66
SCAF11-206ENST00000474828 TOB1P50616 345 aaPredicted RBP19.17■□□□□ 0.66
SCAF11-206ENST00000474828 PSMC6P62333 389 aa19.17■□□□□ 0.66
SCAF11-206ENST00000474828 TLE2Q04725 743 aa19.17■□□□□ 0.66
SCAF11-206ENST00000474828 TRIM60Q495X7 471 aa19.17■□□□□ 0.66
SCAF11-206ENST00000474828 PLPPR4Q7Z2D5 763 aa19.17■□□□□ 0.66
SCAF11-206ENST00000474828 RDM1Q8NG50 284 aa19.17■□□□□ 0.66
SCAF11-206ENST00000474828 AFAP1L1Q8TED9 768 aa19.17■□□□□ 0.66
SCAF11-206ENST00000474828 MTMR9Q96QG7 549 aa19.17■□□□□ 0.66
SCAF11-206ENST00000474828 TUT1Q9H6E5 874 aaKnown RBP19.17■□□□□ 0.66
SCAF11-206ENST00000474828 ZNF286BP0CG31 522 aa19.16■□□□□ 0.66
SCAF11-206ENST00000474828 PDIA4P13667 645 aaKnown RBP19.16■□□□□ 0.66
SCAF11-206ENST00000474828 SYT1P21579 422 aa19.16■□□□□ 0.66
SCAF11-206ENST00000474828 PSEN2P49810 448 aa19.16■□□□□ 0.66
SCAF11-206ENST00000474828 FAAP100Q0VG06 881 aa19.16■□□□□ 0.66
SCAF11-206ENST00000474828 PPP2R5CQ13362 524 aa19.16■□□□□ 0.66
SCAF11-206ENST00000474828 MFSD10Q14728 455 aa19.16■□□□□ 0.66
SCAF11-206ENST00000474828 CTAGE1Q96RT6 745 aa19.16■□□□□ 0.66
SCAF11-206ENST00000474828 PKD2L1Q9P0L9 805 aa19.16■□□□□ 0.66
SCAF11-206ENST00000474828 VAV3Q9UKW4 847 aa19.16■□□□□ 0.66
SCAF11-206ENST00000474828 KIAA0355O15063 1070 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 EVI5O60447 810 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 SORBS3O60504 671 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 SUPT20HL2P0C7V6 817 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 SFNP31947 248 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 SLC26A2P50443 739 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 ADAM17P78536 824 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 SPIRE1Q08AE8 756 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 KIAA0753Q2KHM9 967 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 HABP4Q5JVS0 413 aaKnown RBP19.15■□□□□ 0.66
SCAF11-206ENST00000474828 LRCH2Q5VUJ6 765 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 C4orf32Q8N8J7 132 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 SMARCAD1Q9H4L7 1026 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 PDLIM7Q9NR12 457 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 GTF2IRD1Q9UHL9 959 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 TBX21Q9UL17 535 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 PCDHA10Q9Y5I2 948 aa19.15■□□□□ 0.66
SCAF11-206ENST00000474828 H3BQV1 296 aa19.14■□□□□ 0.65
SCAF11-206ENST00000474828 GAS7O60861 476 aa19.14■□□□□ 0.65
SCAF11-206ENST00000474828 SLFN12Q8IYM2 578 aa19.14■□□□□ 0.65
SCAF11-206ENST00000474828 DPF3Q92784 378 aa19.14■□□□□ 0.65
SCAF11-206ENST00000474828 TEKT3Q9BXF9 490 aa19.14■□□□□ 0.65
SCAF11-206ENST00000474828 ERAP1Q9NZ08 941 aa19.14■□□□□ 0.65
SCAF11-206ENST00000474828 ZNF215Q9UL58 517 aaPredicted RBP19.14■□□□□ 0.65
SCAF11-206ENST00000474828 MAFBQ9Y5Q3 323 aaPredicted RBP19.14■□□□□ 0.65
SCAF11-206ENST00000474828 NR2E3Q9Y5X4 410 aa19.14■□□□□ 0.65
SCAF11-206ENST00000474828 DCDC2CA8MYV0 355 aa19.13■□□□□ 0.65
SCAF11-206ENST00000474828 WDR64B1ANS9 1081 aa19.13■□□□□ 0.65
SCAF11-206ENST00000474828 NEMFO60524 1076 aa19.13■□□□□ 0.65
SCAF11-206ENST00000474828 RILPL1Q5EBL4 403 aa19.13■□□□□ 0.65
SCAF11-206ENST00000474828 BRAPQ7Z569 592 aa19.13■□□□□ 0.65
SCAF11-206ENST00000474828 TRIM50Q86XT4 487 aa19.13■□□□□ 0.65
SCAF11-206ENST00000474828 VTI1AQ96AJ9 217 aa19.13■□□□□ 0.65
SCAF11-206ENST00000474828 UNC45AQ9H3U1 944 aa19.13■□□□□ 0.65
SCAF11-206ENST00000474828 MTMR6Q9Y217 621 aa19.13■□□□□ 0.65
SCAF11-206ENST00000474828 ATP11BQ9Y2G3 1177 aa19.13■□□□□ 0.65
SCAF11-206ENST00000474828 IGSF9BQ9UPX0 1349 aa19.12■□□□□ 0.65
SCAF11-206ENST00000474828 B4GALT4O60513 344 aa19.12■□□□□ 0.65
SCAF11-206ENST00000474828 CLTBP09497 229 aa19.12■□□□□ 0.65
SCAF11-206ENST00000474828 JAK3P52333 1124 aa19.12■□□□□ 0.65
SCAF11-206ENST00000474828 RBL2Q08999 1139 aa19.12■□□□□ 0.65
SCAF11-206ENST00000474828 HIC1Q14526 733 aa19.12■□□□□ 0.65
SCAF11-206ENST00000474828 TTC38Q5R3I4 469 aa19.12■□□□□ 0.65
SCAF11-206ENST00000474828 MIS18BP1Q6P0N0 1132 aa19.12■□□□□ 0.65
SCAF11-206ENST00000474828 CCDC60Q8IWA6 550 aaPredicted RBP19.12■□□□□ 0.65
SCAF11-206ENST00000474828 GJA10Q969M2 543 aa19.12■□□□□ 0.65
SCAF11-206ENST00000474828 TMEM60Q9H2L4 133 aa19.12■□□□□ 0.65
SCAF11-206ENST00000474828 RNPEPQ9H4A4 650 aa19.12■□□□□ 0.65
SCAF11-206ENST00000474828 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.12■□□□□ 0.65
SCAF11-206ENST00000474828 DISC1Q9NRI5 854 aa19.12■□□□□ 0.65
SCAF11-206ENST00000474828 HDAC6Q9UBN7 1215 aa19.12■□□□□ 0.65
SCAF11-206ENST00000474828 NOL7Q9UMY1 257 aaKnown RBP19.12■□□□□ 0.65
SCAF11-206ENST00000474828 TRIM43BA6NCK2 446 aa19.11■□□□□ 0.65
SCAF11-206ENST00000474828 PQBP1O60828 265 aaKnown RBP19.11■□□□□ 0.65
SCAF11-206ENST00000474828 PSAPP07602 524 aa19.11■□□□□ 0.65
SCAF11-206ENST00000474828 ATP4AP20648 1035 aa19.11■□□□□ 0.65
SCAF11-206ENST00000474828 STAT5BP51692 787 aa19.11■□□□□ 0.65
SCAF11-206ENST00000474828 SP4Q02446 784 aa19.11■□□□□ 0.65
SCAF11-206ENST00000474828 GNL2Q13823 731 aaKnown RBP19.11■□□□□ 0.65
SCAF11-206ENST00000474828 GDF6Q6KF10 455 aaPredicted RBP19.11■□□□□ 0.65
SCAF11-206ENST00000474828 C7orf61Q8IZ16 206 aa19.11■□□□□ 0.65
SCAF11-206ENST00000474828 TRIM43Q96BQ3 446 aaPredicted RBP19.11■□□□□ 0.65
SCAF11-206ENST00000474828 TRPV6Q9H1D0 765 aa19.11■□□□□ 0.65
SCAF11-206ENST00000474828 NRCAMQ92823 1304 aa19.1■□□□□ 0.65
SCAF11-206ENST00000474828 DDX39AO00148 427 aaKnown RBP19.1■□□□□ 0.65
SCAF11-206ENST00000474828 TLR3O15455 904 aaKnown RBP19.1■□□□□ 0.65
SCAF11-206ENST00000474828 STX6O43752 255 aa19.1■□□□□ 0.65
SCAF11-206ENST00000474828 RESTQ13127 1097 aa19.1■□□□□ 0.65
SCAF11-206ENST00000474828 CALCRLQ16602 461 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms