RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 ADCY7P51828 1080 aa23.3■■□□□ 1.32
PDLIM4-206ENST00000474421 DEFB103AP81534 67 aa23.3■■□□□ 1.32
PDLIM4-206ENST00000474421 CCDC85BQ15834 202 aaPredicted RBP23.3■■□□□ 1.32
PDLIM4-206ENST00000474421 KCNB2Q92953 911 aa23.3■■□□□ 1.32
PDLIM4-206ENST00000474421 RAD9AQ99638 391 aa23.3■■□□□ 1.32
PDLIM4-206ENST00000474421 ERAP1Q9NZ08 941 aa23.3■■□□□ 1.32
PDLIM4-206ENST00000474421 THEGQ9P2T0 379 aa23.3■■□□□ 1.32
PDLIM4-206ENST00000474421 GJB5O95377 273 aa23.29■■□□□ 1.32
PDLIM4-206ENST00000474421 ARHGAP4P98171 946 aa23.29■■□□□ 1.32
PDLIM4-206ENST00000474421 ARNTL2Q8WYA1 636 aa23.29■■□□□ 1.32
PDLIM4-206ENST00000474421 SEPT8Q92599 483 aa23.29■■□□□ 1.32
PDLIM4-206ENST00000474421 BARHL2Q9NY43 387 aa23.29■■□□□ 1.32
PDLIM4-206ENST00000474421 NAP1L2Q9ULW6 460 aaPredicted RBP23.29■■□□□ 1.32
PDLIM4-206ENST00000474421 MICAL3Q7RTP6 2002 aa23.28■■□□□ 1.32
PDLIM4-206ENST00000474421 STXBP3O00186 592 aa23.28■■□□□ 1.32
PDLIM4-206ENST00000474421 REC8O95072 547 aa23.28■■□□□ 1.32
PDLIM4-206ENST00000474421 AMHP03971 560 aa23.28■■□□□ 1.32
PDLIM4-206ENST00000474421 METAP2P50579 478 aaKnown RBP eCLIP23.28■■□□□ 1.32
PDLIM4-206ENST00000474421 ADAM17P78536 824 aa23.28■■□□□ 1.32
PDLIM4-206ENST00000474421 PLEKHG4Q58EX7 1191 aa23.28■■□□□ 1.32
PDLIM4-206ENST00000474421 DBF4BQ8NFT6 615 aa23.28■■□□□ 1.32
PDLIM4-206ENST00000474421 LMBR1Q8WVP7 490 aa23.28■■□□□ 1.32
PDLIM4-206ENST00000474421 SMARCAD1Q9H4L7 1026 aa23.28■■□□□ 1.32
PDLIM4-206ENST00000474421 CERS4Q9HA82 394 aa23.28■■□□□ 1.32
PDLIM4-206ENST00000474421 TELO2Q9Y4R8 837 aa23.28■■□□□ 1.32
PDLIM4-206ENST00000474421 GSTTP1A0A1W2PQM5 241 aa23.27■■□□□ 1.32
PDLIM4-206ENST00000474421 SMCO2A6NFE2 343 aa23.27■■□□□ 1.32
PDLIM4-206ENST00000474421 HSPA4P34932 840 aa23.27■■□□□ 1.32
PDLIM4-206ENST00000474421 AP3B2Q13367 1082 aa23.27■■□□□ 1.32
PDLIM4-206ENST00000474421 TCTN1Q2MV58 587 aa23.27■■□□□ 1.32
PDLIM4-206ENST00000474421 TYW1BQ6NUM6 668 aa23.27■■□□□ 1.32
PDLIM4-206ENST00000474421 TAF2Q6P1X5 1199 aa23.27■■□□□ 1.32
PDLIM4-206ENST00000474421 BLOC1S2Q6QNY1 142 aa23.27■■□□□ 1.32
PDLIM4-206ENST00000474421 GLG1Q92896 1179 aa23.27■■□□□ 1.32
PDLIM4-206ENST00000474421 JAKMIP1Q96N16 626 aaKnown RBP23.27■■□□□ 1.32
PDLIM4-206ENST00000474421 MXRA8Q9BRK3 442 aa23.27■■□□□ 1.32
PDLIM4-206ENST00000474421 JPH1Q9HDC5 661 aaPredicted RBP23.27■■□□□ 1.32
PDLIM4-206ENST00000474421 FAM217BQ9NTX9 383 aaPredicted RBP23.27■■□□□ 1.32
PDLIM4-206ENST00000474421 PKD2L1Q9P0L9 805 aa23.27■■□□□ 1.32
PDLIM4-206ENST00000474421 PRRC2BQ5JSZ5 2229 aaKnown RBP23.27■■□□□ 1.31
PDLIM4-206ENST00000474421 CTSHP09668 335 aa23.26■■□□□ 1.31
PDLIM4-206ENST00000474421 CDC27P30260 824 aa23.26■■□□□ 1.31
PDLIM4-206ENST00000474421 PPFIA1Q13136 1202 aa23.26■■□□□ 1.31
PDLIM4-206ENST00000474421 RPAINQ86UA6 219 aa23.26■■□□□ 1.31
PDLIM4-206ENST00000474421 MICALL1Q8N3F8 863 aa23.26■■□□□ 1.31
PDLIM4-206ENST00000474421 FBXL16Q8N461 479 aa23.26■■□□□ 1.31
PDLIM4-206ENST00000474421 TNPO1Q92973 898 aaKnown RBP23.26■■□□□ 1.31
PDLIM4-206ENST00000474421 SDF4Q9BRK5 362 aa23.26■■□□□ 1.31
PDLIM4-206ENST00000474421 ANO3Q9BYT9 981 aa23.26■■□□□ 1.31
PDLIM4-206ENST00000474421 PRDM6Q9NQX0 595 aa23.26■■□□□ 1.31
PDLIM4-206ENST00000474421 KCNH7Q9NS40 1196 aa23.26■■□□□ 1.31
PDLIM4-206ENST00000474421 SLC9A2Q9UBY0 812 aa23.26■■□□□ 1.31
PDLIM4-206ENST00000474421 MTCH2Q9Y6C9 303 aa23.26■■□□□ 1.31
PDLIM4-206ENST00000474421 TTC28Q96AY4 2481 aa23.25■■□□□ 1.31
PDLIM4-206ENST00000474421 ARHGEF15O94989 841 aa23.25■■□□□ 1.31
PDLIM4-206ENST00000474421 RPLP2P05387 115 aaKnown RBP23.25■■□□□ 1.31
PDLIM4-206ENST00000474421 PSMA5P28066 241 aa23.25■■□□□ 1.31
PDLIM4-206ENST00000474421 MRPS5P82675 430 aaKnown RBP23.25■■□□□ 1.31
PDLIM4-206ENST00000474421 CEP55Q53EZ4 464 aa23.25■■□□□ 1.31
PDLIM4-206ENST00000474421 FAM26DQ5JW98 314 aa23.25■■□□□ 1.31
PDLIM4-206ENST00000474421 Q6ZUG5 572 aa23.25■■□□□ 1.31
PDLIM4-206ENST00000474421 TMCO2Q7Z6W1 182 aaPredicted RBP23.25■■□□□ 1.31
PDLIM4-206ENST00000474421 RSPH3Q86UC2 560 aa23.25■■□□□ 1.31
PDLIM4-206ENST00000474421 APBB2Q92870 758 aa23.25■■□□□ 1.31
PDLIM4-206ENST00000474421 AZI2Q9H6S1 392 aa23.25■■□□□ 1.31
PDLIM4-206ENST00000474421 INSL6Q9Y581 213 aa23.25■■□□□ 1.31
PDLIM4-206ENST00000474421 SNX14Q9Y5W7 946 aa23.25■■□□□ 1.31
PDLIM4-206ENST00000474421 NFASCO94856 1347 aa23.25■■□□□ 1.31
PDLIM4-206ENST00000474421 LCHNA4D1U4 455 aa23.24■■□□□ 1.31
PDLIM4-206ENST00000474421 EPOPA6NHQ4 379 aa23.24■■□□□ 1.31
PDLIM4-206ENST00000474421 RFXAPO00287 272 aa23.24■■□□□ 1.31
PDLIM4-206ENST00000474421 ADD1P35611 737 aaKnown RBP23.24■■□□□ 1.31
PDLIM4-206ENST00000474421 SREBF1P36956 1147 aa23.24■■□□□ 1.31
PDLIM4-206ENST00000474421 APOBRQ0VD83 1088 aa23.24■■□□□ 1.31
PDLIM4-206ENST00000474421 MKRN4PQ13434 485 aaPredicted RBP23.24■■□□□ 1.31
PDLIM4-206ENST00000474421 PFKFB3Q16875 520 aaPredicted RBP23.24■■□□□ 1.31
PDLIM4-206ENST00000474421 MCTP2Q6DN12 878 aa23.24■■□□□ 1.31
PDLIM4-206ENST00000474421 CCDC12Q8WUD4 166 aaPredicted RBP23.24■■□□□ 1.31
PDLIM4-206ENST00000474421 BRF1Q92994 677 aa23.24■■□□□ 1.31
PDLIM4-206ENST00000474421 ASB2Q96Q27 587 aa23.24■■□□□ 1.31
PDLIM4-206ENST00000474421 SPTBN5Q9NRC6 3674 aaKnown RBP23.23■■□□□ 1.31
PDLIM4-206ENST00000474421 SCG2P13521 617 aa23.23■■□□□ 1.31
PDLIM4-206ENST00000474421 MARK3P27448 753 aa23.23■■□□□ 1.31
PDLIM4-206ENST00000474421 ZNF76P36508 570 aa23.23■■□□□ 1.31
PDLIM4-206ENST00000474421 CLK2P49760 499 aaKnown RBP23.23■■□□□ 1.31
PDLIM4-206ENST00000474421 GRIK4Q16099 956 aa23.23■■□□□ 1.31
PDLIM4-206ENST00000474421 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.23■■□□□ 1.31
PDLIM4-206ENST00000474421 NIPA1Q7RTP0 329 aa23.23■■□□□ 1.31
PDLIM4-206ENST00000474421 MYOCDQ8IZQ8 938 aa23.23■■□□□ 1.31
PDLIM4-206ENST00000474421 IL27Q8NEV9 243 aa23.23■■□□□ 1.31
PDLIM4-206ENST00000474421 TGS1Q96RS0 853 aaKnown RBP23.23■■□□□ 1.31
PDLIM4-206ENST00000474421 TUBE1Q9UJT0 475 aa23.23■■□□□ 1.31
PDLIM4-206ENST00000474421 NID2Q14112 1375 aa23.23■■□□□ 1.31
PDLIM4-206ENST00000474421 ESYT2A0FGR8 921 aa23.22■■□□□ 1.31
PDLIM4-206ENST00000474421 MBLAC1A4D2B0 266 aaPredicted RBP23.22■■□□□ 1.31
PDLIM4-206ENST00000474421 RRN3P2A6NIE6 340 aa23.22■■□□□ 1.31
PDLIM4-206ENST00000474421 MEIS1O00470 390 aa23.22■■□□□ 1.31
PDLIM4-206ENST00000474421 EPB41L2O43491 1005 aaKnown RBP23.22■■□□□ 1.31
PDLIM4-206ENST00000474421 CPA1P15085 419 aa23.22■■□□□ 1.31
PDLIM4-206ENST00000474421 RPS6KB1P23443 525 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms