RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 ARP10275 920 aa22.74■■□□□ 1.23
TMEM54-204ENST00000474144 PDIA3P30101 505 aaKnown RBP22.74■■□□□ 1.23
TMEM54-204ENST00000474144 NTRK3Q16288 839 aa22.74■■□□□ 1.23
TMEM54-204ENST00000474144 JAKMIP3Q5VZ66 844 aa22.74■■□□□ 1.23
TMEM54-204ENST00000474144 SEPT1Q8WYJ6 367 aa22.74■■□□□ 1.23
TMEM54-204ENST00000474144 SLC28A3Q9HAS3 691 aa22.74■■□□□ 1.23
TMEM54-204ENST00000474144 NCOA5Q9HCD5 579 aaKnown RBP22.74■■□□□ 1.23
TMEM54-204ENST00000474144 ZNF215Q9UL58 517 aaPredicted RBP22.74■■□□□ 1.23
TMEM54-204ENST00000474144 PRUNE2Q8WUY3 3088 aa22.73■■□□□ 1.23
TMEM54-204ENST00000474144 MAFGO15525 162 aa22.73■■□□□ 1.23
TMEM54-204ENST00000474144 EVCP57679 992 aa22.73■■□□□ 1.23
TMEM54-204ENST00000474144 AP3B2Q13367 1082 aa22.73■■□□□ 1.23
TMEM54-204ENST00000474144 TMCO2Q7Z6W1 182 aaPredicted RBP22.73■■□□□ 1.23
TMEM54-204ENST00000474144 SLC9A7Q96T83 725 aa22.73■■□□□ 1.23
TMEM54-204ENST00000474144 BAIAP3O94812 1187 aa22.72■■□□□ 1.23
TMEM54-204ENST00000474144 PARNO95453 639 aaKnown RBP22.72■■□□□ 1.23
TMEM54-204ENST00000474144 MARK3P27448 753 aa22.72■■□□□ 1.23
TMEM54-204ENST00000474144 SREBF1P36956 1147 aa22.72■■□□□ 1.23
TMEM54-204ENST00000474144 WDR5P61964 334 aaKnown RBP22.72■■□□□ 1.23
TMEM54-204ENST00000474144 ADAM17P78536 824 aa22.72■■□□□ 1.23
TMEM54-204ENST00000474144 ARHGAP4P98171 946 aa22.72■■□□□ 1.23
TMEM54-204ENST00000474144 CNKSR3Q6P9H4 555 aa22.72■■□□□ 1.23
TMEM54-204ENST00000474144 LMBR1Q8WVP7 490 aa22.72■■□□□ 1.23
TMEM54-204ENST00000474144 SLC26A6Q9BXS9 759 aa22.72■■□□□ 1.23
TMEM54-204ENST00000474144 OSBPL7Q9BZF2 842 aa22.72■■□□□ 1.23
TMEM54-204ENST00000474144 UPF3BQ9BZI7 483 aaKnown RBP22.72■■□□□ 1.23
TMEM54-204ENST00000474144 CYP46A1Q9Y6A2 500 aa22.72■■□□□ 1.23
TMEM54-204ENST00000474144 RSPH10B2B2RC85 870 aa22.71■■□□□ 1.23
TMEM54-204ENST00000474144 CA3P07451 260 aa22.71■■□□□ 1.23
TMEM54-204ENST00000474144 RSPH10BP0C881 870 aa22.71■■□□□ 1.23
TMEM54-204ENST00000474144 DEFB103AP81534 67 aa22.71■■□□□ 1.23
TMEM54-204ENST00000474144 ITGB3BPQ13352 177 aaPredicted RBP22.71■■□□□ 1.23
TMEM54-204ENST00000474144 ADGRE1Q14246 886 aa22.71■■□□□ 1.23
TMEM54-204ENST00000474144 CEP55Q53EZ4 464 aa22.71■■□□□ 1.23
TMEM54-204ENST00000474144 PPP2R2DQ66LE6 453 aa22.71■■□□□ 1.23
TMEM54-204ENST00000474144 HERC6Q8IVU3 1022 aa22.71■■□□□ 1.23
TMEM54-204ENST00000474144 TEX2Q8IWB9 1127 aa22.71■■□□□ 1.23
TMEM54-204ENST00000474144 PHOSPHO2Q8TCD6 241 aa22.71■■□□□ 1.23
TMEM54-204ENST00000474144 PCYT2Q99447 389 aa22.71■■□□□ 1.23
TMEM54-204ENST00000474144 ZMYND12Q9H0C1 365 aa22.71■■□□□ 1.23
TMEM54-204ENST00000474144 GLT8D2Q9H1C3 349 aa22.71■■□□□ 1.23
TMEM54-204ENST00000474144 AGO4Q9HCK5 861 aaKnown RBP22.71■■□□□ 1.23
TMEM54-204ENST00000474144 JPH1Q9HDC5 661 aaPredicted RBP22.71■■□□□ 1.23
TMEM54-204ENST00000474144 CHD7Q9P2D1 2997 aa22.71■■□□□ 1.23
TMEM54-204ENST00000474144 ESYT2A0FGR8 921 aa22.7■■□□□ 1.22
TMEM54-204ENST00000474144 ARHGEF15O94989 841 aa22.7■■□□□ 1.22
TMEM54-204ENST00000474144 CTSHP09668 335 aa22.7■■□□□ 1.22
TMEM54-204ENST00000474144 ERICH6BQ5W0A0 696 aa22.7■■□□□ 1.22
TMEM54-204ENST00000474144 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.7■■□□□ 1.22
TMEM54-204ENST00000474144 USP38Q8NB14 1042 aa22.7■■□□□ 1.22
TMEM54-204ENST00000474144 GLG1Q92896 1179 aa22.7■■□□□ 1.22
TMEM54-204ENST00000474144 UIMC1Q96RL1 719 aa22.7■■□□□ 1.22
TMEM54-204ENST00000474144 SLC9A2Q9UBY0 812 aa22.7■■□□□ 1.22
TMEM54-204ENST00000474144 NFASCO94856 1347 aa22.69■■□□□ 1.22
TMEM54-204ENST00000474144 FAM86B1E9PN63 330 aa22.69■■□□□ 1.22
TMEM54-204ENST00000474144 MEIS1O00470 390 aa22.69■■□□□ 1.22
TMEM54-204ENST00000474144 FAM86B2P0C5J1 330 aa22.69■■□□□ 1.22
TMEM54-204ENST00000474144 GNAT1P11488 350 aa22.69■■□□□ 1.22
TMEM54-204ENST00000474144 IFNAR1P17181 557 aa22.69■■□□□ 1.22
TMEM54-204ENST00000474144 ZNF76P36508 570 aa22.69■■□□□ 1.22
TMEM54-204ENST00000474144 KCNJ6P48051 423 aa22.69■■□□□ 1.22
TMEM54-204ENST00000474144 AKAP17AQ02040 695 aaKnown RBP22.69■■□□□ 1.22
TMEM54-204ENST00000474144 RUFY4Q6ZNE9 571 aa22.69■■□□□ 1.22
TMEM54-204ENST00000474144 RASGRP4Q8TDF6 673 aa22.69■■□□□ 1.22
TMEM54-204ENST00000474144 CRYGNQ8WXF5 182 aa22.69■■□□□ 1.22
TMEM54-204ENST00000474144 GAS2L1Q99501 681 aaPredicted RBP22.69■■□□□ 1.22
TMEM54-204ENST00000474144 RNF26Q9BY78 433 aaPredicted RBP22.69■■□□□ 1.22
TMEM54-204ENST00000474144 TM6SF1Q9BZW5 370 aa22.69■■□□□ 1.22
TMEM54-204ENST00000474144 C6orf50Q9HD87 102 aa22.69■■□□□ 1.22
TMEM54-204ENST00000474144 ERAP1Q9NZ08 941 aa22.69■■□□□ 1.22
TMEM54-204ENST00000474144 NRCAMQ92823 1304 aa22.68■■□□□ 1.22
TMEM54-204ENST00000474144 LGR5O75473 907 aa22.68■■□□□ 1.22
TMEM54-204ENST00000474144 DBF4BQ8NFT6 615 aa22.68■■□□□ 1.22
TMEM54-204ENST00000474144 ZBTB10Q96DT7 871 aa22.68■■□□□ 1.22
TMEM54-204ENST00000474144 SDF4Q9BRK5 362 aa22.68■■□□□ 1.22
TMEM54-204ENST00000474144 SMARCAD1Q9H4L7 1026 aa22.68■■□□□ 1.22
TMEM54-204ENST00000474144 CERS4Q9HA82 394 aa22.68■■□□□ 1.22
TMEM54-204ENST00000474144 VPS54Q9P1Q0 977 aa22.68■■□□□ 1.22
TMEM54-204ENST00000474144 KAT6AQ92794 2004 aa22.68■■□□□ 1.22
TMEM54-204ENST00000474144 EMSYQ7Z589 1322 aa22.67■■□□□ 1.22
TMEM54-204ENST00000474144 ABHD14A-ACY1A0A1B0GW23 586 aa22.67■■□□□ 1.22
TMEM54-204ENST00000474144 DDX39AO00148 427 aaKnown RBP22.67■■□□□ 1.22
TMEM54-204ENST00000474144 ACTR2P61160 394 aa22.67■■□□□ 1.22
TMEM54-204ENST00000474144 PPFIA1Q13136 1202 aa22.67■■□□□ 1.22
TMEM54-204ENST00000474144 STK3Q13188 491 aa22.67■■□□□ 1.22
TMEM54-204ENST00000474144 IKBKEQ14164 716 aa22.67■■□□□ 1.22
TMEM54-204ENST00000474144 GRIK4Q16099 956 aa22.67■■□□□ 1.22
TMEM54-204ENST00000474144 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.67■■□□□ 1.22
TMEM54-204ENST00000474144 REXO1Q8N1G1 1221 aaKnown RBP22.67■■□□□ 1.22
TMEM54-204ENST00000474144 CCDC12Q8WUD4 166 aaPredicted RBP22.67■■□□□ 1.22
TMEM54-204ENST00000474144 PDRG1Q9NUG6 133 aa22.67■■□□□ 1.22
TMEM54-204ENST00000474144 IGLV3-22A0A075B6J6 115 aa22.66■■□□□ 1.22
TMEM54-204ENST00000474144 RFXAPO00287 272 aa22.66■■□□□ 1.22
TMEM54-204ENST00000474144 CYP3A4P08684 503 aa22.66■■□□□ 1.22
TMEM54-204ENST00000474144 IGFBP4P22692 258 aa22.66■■□□□ 1.22
TMEM54-204ENST00000474144 PLEKHG4Q58EX7 1191 aa22.66■■□□□ 1.22
TMEM54-204ENST00000474144 MARCH8Q5T0T0 291 aa22.66■■□□□ 1.22
TMEM54-204ENST00000474144 SPRED2Q7Z698 418 aa22.66■■□□□ 1.22
TMEM54-204ENST00000474144 PLA2G4DQ86XP0 818 aa22.66■■□□□ 1.22
TMEM54-204ENST00000474144 PPM1EQ8WY54 764 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms