RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 PTGFRNQ9P2B2 879 aa3.77□□□□□ -1.81
CCDC39-203ENST00000473854 ARHGAP20Q9P2F6 1191 aa3.77□□□□□ -1.81
CCDC39-203ENST00000473854 ASH2LQ9UBL3 628 aa3.77□□□□□ -1.81
CCDC39-203ENST00000473854 ZFP69BQ9UJL9 534 aa3.77□□□□□ -1.81
CCDC39-203ENST00000473854 WASF3Q9UPY6 502 aa3.77□□□□□ -1.81
CCDC39-203ENST00000473854 GIT1Q9Y2X7 761 aa3.77□□□□□ -1.81
CCDC39-203ENST00000473854 ENO2P09104 434 aaPredicted RBP3.76□□□□□ -1.81
CCDC39-203ENST00000473854 ITGB6P18564 788 aa3.76□□□□□ -1.81
CCDC39-203ENST00000473854 POLD1P28340 1107 aa3.76□□□□□ -1.81
CCDC39-203ENST00000473854 SKIDA1Q1XH10 827 aa3.76□□□□□ -1.81
CCDC39-203ENST00000473854 ACBD5Q5T8D3 534 aaPredicted RBP3.76□□□□□ -1.81
CCDC39-203ENST00000473854 ZKSCAN2Q63HK3 967 aa3.76□□□□□ -1.81
CCDC39-203ENST00000473854 GTF2IRD2BQ6EKJ0 949 aa3.76□□□□□ -1.81
CCDC39-203ENST00000473854 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
CCDC39-203ENST00000473854 ADGRE4PQ86SQ3 457 aa3.76□□□□□ -1.81
CCDC39-203ENST00000473854 GTF2IRD2Q86UP8 949 aa3.76□□□□□ -1.81
CCDC39-203ENST00000473854 TRIM59Q8IWR1 403 aa3.76□□□□□ -1.81
CCDC39-203ENST00000473854 THEMISQ8N1K5 641 aaPredicted RBP3.76□□□□□ -1.81
CCDC39-203ENST00000473854 ZNF808Q8N4W9 903 aaPredicted RBP3.76□□□□□ -1.81
CCDC39-203ENST00000473854 CHAMP1Q96JM3 812 aa3.76□□□□□ -1.81
CCDC39-203ENST00000473854 PLA2G12BQ9BX93 195 aa3.76□□□□□ -1.81
CCDC39-203ENST00000473854 NELFAQ9H3P2 528 aa3.76□□□□□ -1.81
CCDC39-203ENST00000473854 TLR9Q9NR96 1032 aa3.76□□□□□ -1.81
CCDC39-203ENST00000473854 PPT2Q9UMR5 302 aa3.76□□□□□ -1.81
CCDC39-203ENST00000473854 NR2E1Q9Y466 385 aa3.76□□□□□ -1.81
CCDC39-203ENST00000473854 A0A0A6YYK5 440 aaPredicted RBP3.75□□□□□ -1.81
CCDC39-203ENST00000473854 NFYCQ13952 458 aa3.75□□□□□ -1.81
CCDC39-203ENST00000473854 TESK1Q15569 626 aa3.75□□□□□ -1.81
CCDC39-203ENST00000473854 LAIR1Q6GTX8 287 aa3.75□□□□□ -1.81
CCDC39-203ENST00000473854 SYCE2Q6PIF2 218 aa3.75□□□□□ -1.81
CCDC39-203ENST00000473854 DPP8Q6V1X1 898 aaPredicted RBP3.75□□□□□ -1.81
CCDC39-203ENST00000473854 DNAJC14Q6Y2X3 702 aaPredicted RBP3.75□□□□□ -1.81
CCDC39-203ENST00000473854 PROSER1Q86XN7 944 aa3.75□□□□□ -1.81
CCDC39-203ENST00000473854 TMPRSS6Q8IU80 811 aa3.75□□□□□ -1.81
CCDC39-203ENST00000473854 ZNF513Q8N8E2 541 aaPredicted RBP3.75□□□□□ -1.81
CCDC39-203ENST00000473854 KLHL6Q8WZ60 621 aa3.75□□□□□ -1.81
CCDC39-203ENST00000473854 ZNF764Q96H86 408 aaPredicted RBP3.75□□□□□ -1.81
CCDC39-203ENST00000473854 SPATA32Q96LK8 384 aa3.75□□□□□ -1.81
CCDC39-203ENST00000473854 DPYSL5Q9BPU6 564 aa3.75□□□□□ -1.81
CCDC39-203ENST00000473854 C12orf65Q9H3J6 166 aaKnown RBP3.75□□□□□ -1.81
CCDC39-203ENST00000473854 ADARB2Q9NS39 739 aaKnown RBP3.75□□□□□ -1.81
CCDC39-203ENST00000473854 CLDND1Q9NY35 253 aa3.75□□□□□ -1.81
CCDC39-203ENST00000473854 PUF60Q9UHX1 559 aaKnown RBP3.75□□□□□ -1.81
CCDC39-203ENST00000473854 PCDHB10Q9UN67 800 aa3.75□□□□□ -1.81
CCDC39-203ENST00000473854 A0A1W2PQH9 124 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 NUDT3O95989 172 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 CPP00450 1065 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 ERBB2P04626 1255 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 ZNF888P0CJ79 500 aaPredicted RBP3.74□□□□□ -1.81
CCDC39-203ENST00000473854 CDK4P11802 303 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 HOXC12P31275 282 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 LTBRP36941 435 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 EIF6P56537 245 aaKnown RBP3.74□□□□□ -1.81
CCDC39-203ENST00000473854 COL10A1Q03692 680 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 DUSP8Q13202 625 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 RNF151Q2KHN1 245 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 BHLHA9Q7RTU4 235 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 PRIMA1Q86XR5 153 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 STPG3Q8N7X2 389 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 MICAL1Q8TDZ2 1067 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 CCDC140Q96MF4 163 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 CEP72Q9P209 647 aa3.74□□□□□ -1.81
CCDC39-203ENST00000473854 KRTAP23-1A1A580 65 aa3.73□□□□□ -1.81
CCDC39-203ENST00000473854 SUPT5HO00267 1087 aaKnown RBP3.73□□□□□ -1.81
CCDC39-203ENST00000473854 ARHGAP6O43182 974 aa3.73□□□□□ -1.81
CCDC39-203ENST00000473854 FAHP16930 419 aa3.73□□□□□ -1.81
CCDC39-203ENST00000473854 CD38P28907 300 aa3.73□□□□□ -1.81
CCDC39-203ENST00000473854 PTGS2P35354 604 aa3.73□□□□□ -1.81
CCDC39-203ENST00000473854 MSX2P35548 267 aaPredicted RBP3.73□□□□□ -1.81
CCDC39-203ENST00000473854 ETV4P43268 484 aa3.73□□□□□ -1.81
CCDC39-203ENST00000473854 GLRBP48167 497 aa3.73□□□□□ -1.81
CCDC39-203ENST00000473854 KIAA1211LQ6NV74 962 aa3.73□□□□□ -1.81
CCDC39-203ENST00000473854 ZNF662Q6ZS27 426 aa3.73□□□□□ -1.81
CCDC39-203ENST00000473854 SGMS1Q86VZ5 419 aa3.73□□□□□ -1.81
CCDC39-203ENST00000473854 SLC6A20Q9NP91 592 aa3.73□□□□□ -1.81
CCDC39-203ENST00000473854 PLA2G3Q9NZ20 509 aa3.73□□□□□ -1.81
CCDC39-203ENST00000473854 RBPJLQ9UBG7 517 aa3.73□□□□□ -1.81
CCDC39-203ENST00000473854 APEX2Q9UBZ4 518 aa3.73□□□□□ -1.81
CCDC39-203ENST00000473854 PCDHA2Q9Y5H9 948 aa3.73□□□□□ -1.81
CCDC39-203ENST00000473854 MASP2O00187 686 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 LMNAP02545 664 aaKnown RBP3.72□□□□□ -1.81
CCDC39-203ENST00000473854 GCP02774 474 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 SCG5P05408 212 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 KRT4P19013 534 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 C21orf58P58505 322 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 KRTAP10-9P60411 292 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 FSTL1Q12841 308 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 FOXL1Q12952 345 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 CRHR2Q13324 411 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 TOP3AQ13472 1001 aaPredicted RBP3.72□□□□□ -1.81
CCDC39-203ENST00000473854 PAN2Q504Q3 1202 aaKnown RBP3.72□□□□□ -1.81
CCDC39-203ENST00000473854 PHF19Q5T6S3 580 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 VHLLQ6RSH7 139 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 GLCCI1Q86VQ1 547 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 CCDC103Q8IW40 242 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 RCBTB1Q8NDN9 531 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 PPP1R14AQ96A00 147 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 MRGPRX3Q96LB0 322 aa3.72□□□□□ -1.81
CCDC39-203ENST00000473854 PDGFDQ9GZP0 370 aaPredicted RBP3.72□□□□□ -1.81
CCDC39-203ENST00000473854 FBXO10Q9UK96 956 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms