RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 GSDMDP57764 484 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 SP4Q02446 784 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 MKRN3Q13064 507 aaKnown RBP6.93□□□□□ -1.3
CLK1-210ENST00000473565 MTMR1Q13613 665 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 CT47A1Q5JQC4 288 aaPredicted RBP6.93□□□□□ -1.3
CLK1-210ENST00000473565 FAM26FQ5R3K3 315 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 MAEAQ7L5Y9 396 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 DHTKD1Q96HY7 919 aaPredicted RBP6.93□□□□□ -1.3
CLK1-210ENST00000473565 A1CFQ9NQ94 594 aaKnown RBP6.93□□□□□ -1.3
CLK1-210ENST00000473565 BTBD7Q9P203 1132 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 LIMA1Q9UHB6 759 aaKnown RBP6.93□□□□□ -1.3
CLK1-210ENST00000473565 SAMM50Q9Y512 469 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 B4DLN1 442 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 DHX15O43143 795 aaKnown RBP6.93□□□□□ -1.3
CLK1-210ENST00000473565 PRKCSHP14314 528 aaPredicted RBP6.93□□□□□ -1.3
CLK1-210ENST00000473565 KLK7P49862 253 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 CNTN2Q02246 1040 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 RBL2Q08999 1139 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 TBX2Q13207 712 aaPredicted RBP6.93□□□□□ -1.3
CLK1-210ENST00000473565 PPP2R5CQ13362 524 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 GIT2Q14161 759 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 SFR1Q86XK3 245 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 GPIHBP1Q8IV16 184 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 TC2NQ8N9U0 490 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 CCDC150Q8NCX0 1101 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 CNOT6LQ96LI5 555 aaKnown RBP6.93□□□□□ -1.3
CLK1-210ENST00000473565 LXNQ9BS40 222 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 TEKT3Q9BXF9 490 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 TAF1DQ9H5J8 278 aaPredicted RBP6.93□□□□□ -1.3
CLK1-210ENST00000473565 AGO4Q9HCK5 861 aaKnown RBP6.93□□□□□ -1.3
CLK1-210ENST00000473565 SPTLC3Q9NUV7 552 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 ADAMTS5Q9UNA0 930 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 RABGAP1Q9Y3P9 1069 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 UBIAD1Q9Y5Z9 338 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 PAPPA2Q9BXP8 1791 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 KIAA1217Q5T5P2 1943 aa6.93□□□□□ -1.3
CLK1-210ENST00000473565 GLTPD2A6NH11 291 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 PBX1P40424 430 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 IREB2P48200 963 aaKnown RBP6.92□□□□□ -1.3
CLK1-210ENST00000473565 UBXN1Q04323 297 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 KCNA1Q09470 495 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 UGCGQ16739 394 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 PCNX4Q63HM2 1172 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 KSR1Q8IVT5 923 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 SYT2Q8N9I0 419 aaPredicted RBP6.92□□□□□ -1.3
CLK1-210ENST00000473565 POLR3CQ9BUI4 534 aaPredicted RBP6.92□□□□□ -1.3
CLK1-210ENST00000473565 TEX13BQ9BXU2 312 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 PCDHA2Q9Y5H9 948 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 MYBP10242 640 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 CASP14P31944 242 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 FXR1P51114 621 aaKnown RBP eCLIP6.92□□□□□ -1.3
CLK1-210ENST00000473565 SETQ01105 290 aaPredicted RBP6.92□□□□□ -1.3
CLK1-210ENST00000473565 MTF1Q14872 753 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 FILIP1LQ4L180 1135 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 E4F1Q66K89 784 aaPredicted RBP6.92□□□□□ -1.3
CLK1-210ENST00000473565 CENPPQ6IPU0 288 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 RINT1Q6NUQ1 792 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 MIER3Q7Z3K6 550 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 CCDC65Q8IXS2 484 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 MYOCDQ8IZQ8 938 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 SCFD1Q8WVM8 642 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 L3MBTL3Q96JM7 780 aaPredicted RBP6.92□□□□□ -1.3
CLK1-210ENST00000473565 JADE2Q9NQC1 790 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 CYP39A1Q9NYL5 469 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 LCTP09848 1927 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 ASTN1O14525 1302 aa6.92□□□□□ -1.3
CLK1-210ENST00000473565 PRPF6O94906 941 aaKnown RBP6.91□□□□□ -1.3
CLK1-210ENST00000473565 CCNE2O96020 404 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 GYPCP04921 128 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 NR3C2P08235 984 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 GJA5P36382 358 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 MTIF2P46199 727 aaKnown RBP6.91□□□□□ -1.3
CLK1-210ENST00000473565 GHRHRQ02643 423 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 SEMA3FQ13275 785 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 SH3D19Q5HYK7 790 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 B3GNT9Q6UX72 402 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 USP50Q70EL3 339 aaPredicted RBP6.91□□□□□ -1.3
CLK1-210ENST00000473565 TMEM139Q8IV31 216 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 GUF1Q8N442 669 aaKnown RBP6.91□□□□□ -1.3
CLK1-210ENST00000473565 OPTNQ96CV9 577 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 TUBGCP2Q9BSJ2 902 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 ACAD9Q9H845 621 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 BICDL2A1A5D9 508 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 RGS20O76081 388 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 EYA4O95677 639 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 NCAPG2Q86XI2 1143 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 ANKRD13AQ8IZ07 590 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 CCDC155Q8N6L0 562 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 CTAGE1Q96RT6 745 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 DESI2Q9BSY9 194 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 LRRC27Q9C0I9 530 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 THAP9Q9H5L6 903 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 HOXC10Q9NYD6 342 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 MAGEC2Q9UBF1 373 aaPredicted RBP6.91□□□□□ -1.3
CLK1-210ENST00000473565 FRMPD4Q14CM0 1322 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 LRRC10BA6NIK2 292 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 NMT1P30419 496 aaKnown RBP6.91□□□□□ -1.3
CLK1-210ENST00000473565 NF2P35240 595 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 HOXD13P35453 343 aa6.91□□□□□ -1.3
CLK1-210ENST00000473565 SPAG1Q07617 926 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms