RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 SREBF1P36956 1147 aa23.73■■□□□ 1.39
EPHB3-202ENST00000473079 THPOP40225 353 aa23.73■■□□□ 1.39
EPHB3-202ENST00000473079 KCNJ6P48051 423 aa23.73■■□□□ 1.39
EPHB3-202ENST00000473079 SP4Q02446 784 aa23.73■■□□□ 1.39
EPHB3-202ENST00000473079 MBTPS1Q14703 1052 aa23.73■■□□□ 1.39
EPHB3-202ENST00000473079 CEP55Q53EZ4 464 aa23.73■■□□□ 1.39
EPHB3-202ENST00000473079 MCTP2Q6DN12 878 aa23.73■■□□□ 1.39
EPHB3-202ENST00000473079 RUFY3Q7L099 469 aa23.73■■□□□ 1.39
EPHB3-202ENST00000473079 ZMYND12Q9H0C1 365 aa23.73■■□□□ 1.39
EPHB3-202ENST00000473079 SETD4Q9NVD3 440 aa23.73■■□□□ 1.39
EPHB3-202ENST00000473079 PPP4R2Q9NY27 417 aa23.73■■□□□ 1.39
EPHB3-202ENST00000473079 NRCAMQ92823 1304 aa23.73■■□□□ 1.39
EPHB3-202ENST00000473079 A0A0C4DFX4 3053 aa23.73■■□□□ 1.39
EPHB3-202ENST00000473079 TRIP12Q14669 1992 aaPredicted RBP23.72■■□□□ 1.39
EPHB3-202ENST00000473079 KIF28PB7ZC32 967 aa23.72■■□□□ 1.39
EPHB3-202ENST00000473079 MEIS1O00470 390 aa23.72■■□□□ 1.39
EPHB3-202ENST00000473079 WDR5P61964 334 aaKnown RBP23.72■■□□□ 1.39
EPHB3-202ENST00000473079 IKBKEQ14164 716 aa23.72■■□□□ 1.39
EPHB3-202ENST00000473079 NTRK3Q16288 839 aa23.72■■□□□ 1.39
EPHB3-202ENST00000473079 PKN1Q16512 942 aa23.72■■□□□ 1.39
EPHB3-202ENST00000473079 PPP2R2DQ66LE6 453 aa23.72■■□□□ 1.39
EPHB3-202ENST00000473079 CYP2W1Q8TAV3 490 aa23.72■■□□□ 1.39
EPHB3-202ENST00000473079 CCDC12Q8WUD4 166 aaPredicted RBP23.72■■□□□ 1.39
EPHB3-202ENST00000473079 TM6SF1Q9BZW5 370 aa23.72■■□□□ 1.39
EPHB3-202ENST00000473079 ERAP1Q9NZ08 941 aa23.72■■□□□ 1.39
EPHB3-202ENST00000473079 NFASCO94856 1347 aa23.72■■□□□ 1.39
EPHB3-202ENST00000473079 LGR5O75473 907 aa23.71■■□□□ 1.39
EPHB3-202ENST00000473079 PDIA3P30101 505 aaKnown RBP23.71■■□□□ 1.39
EPHB3-202ENST00000473079 NIPA1Q7RTP0 329 aa23.71■■□□□ 1.39
EPHB3-202ENST00000473079 LMBR1Q8WVP7 490 aa23.71■■□□□ 1.39
EPHB3-202ENST00000473079 SMARCAD1Q9H4L7 1026 aa23.71■■□□□ 1.39
EPHB3-202ENST00000473079 JPH1Q9HDC5 661 aaPredicted RBP23.71■■□□□ 1.39
EPHB3-202ENST00000473079 TMEM260Q9NX78 707 aa23.71■■□□□ 1.39
EPHB3-202ENST00000473079 EYSQ5T1H1 3165 aa23.71■■□□□ 1.39
EPHB3-202ENST00000473079 CA3P07451 260 aa23.7■■□□□ 1.38
EPHB3-202ENST00000473079 IFNAR1P17181 557 aa23.7■■□□□ 1.38
EPHB3-202ENST00000473079 TCTN1Q2MV58 587 aa23.7■■□□□ 1.38
EPHB3-202ENST00000473079 TET1Q8NFU7 2136 aa23.7■■□□□ 1.38
EPHB3-202ENST00000473079 CRYGNQ8WXF5 182 aa23.7■■□□□ 1.38
EPHB3-202ENST00000473079 PGBD1Q96JS3 809 aa23.7■■□□□ 1.38
EPHB3-202ENST00000473079 RNF26Q9BY78 433 aaPredicted RBP23.7■■□□□ 1.38
EPHB3-202ENST00000473079 C6orf50Q9HD87 102 aa23.7■■□□□ 1.38
EPHB3-202ENST00000473079 PKD2L1Q9P0L9 805 aa23.7■■□□□ 1.38
EPHB3-202ENST00000473079 SLC9A2Q9UBY0 812 aa23.7■■□□□ 1.38
EPHB3-202ENST00000473079 GBF1Q92538 1859 aa23.69■■□□□ 1.38
EPHB3-202ENST00000473079 DOCK5Q9H7D0 1870 aa23.69■■□□□ 1.38
EPHB3-202ENST00000473079 DLL1O00548 723 aa23.69■■□□□ 1.38
EPHB3-202ENST00000473079 CYP3A4P08684 503 aa23.69■■□□□ 1.38
EPHB3-202ENST00000473079 ARP10275 920 aa23.69■■□□□ 1.38
EPHB3-202ENST00000473079 ARHGAP4P98171 946 aa23.69■■□□□ 1.38
EPHB3-202ENST00000473079 ADGRE1Q14246 886 aa23.69■■□□□ 1.38
EPHB3-202ENST00000473079 PLEKHG4Q58EX7 1191 aa23.69■■□□□ 1.38
EPHB3-202ENST00000473079 FAM26DQ5JW98 314 aa23.69■■□□□ 1.38
EPHB3-202ENST00000473079 RPAINQ86UA6 219 aa23.69■■□□□ 1.38
EPHB3-202ENST00000473079 SDF4Q9BRK5 362 aa23.69■■□□□ 1.38
EPHB3-202ENST00000473079 AGO4Q9HCK5 861 aaKnown RBP23.69■■□□□ 1.38
EPHB3-202ENST00000473079 CYP46A1Q9Y6A2 500 aa23.69■■□□□ 1.38
EPHB3-202ENST00000473079 UNC80Q8N2C7 3258 aa23.69■■□□□ 1.38
EPHB3-202ENST00000473079 GNA11P29992 359 aa23.68■■□□□ 1.38
EPHB3-202ENST00000473079 AKAP17AQ02040 695 aaKnown RBP23.68■■□□□ 1.38
EPHB3-202ENST00000473079 TOB2Q14106 344 aaPredicted RBP23.68■■□□□ 1.38
EPHB3-202ENST00000473079 DBF4BQ8NFT6 615 aa23.68■■□□□ 1.38
EPHB3-202ENST00000473079 GLG1Q92896 1179 aa23.68■■□□□ 1.38
EPHB3-202ENST00000473079 PHKBQ93100 1093 aa23.68■■□□□ 1.38
EPHB3-202ENST00000473079 TLL1O43897 1013 aa23.67■■□□□ 1.38
EPHB3-202ENST00000473079 ATG7O95352 703 aa23.67■■□□□ 1.38
EPHB3-202ENST00000473079 ZNF76P36508 570 aa23.67■■□□□ 1.38
EPHB3-202ENST00000473079 ITGB3BPQ13352 177 aaPredicted RBP23.67■■□□□ 1.38
EPHB3-202ENST00000473079 MKRN4PQ13434 485 aaPredicted RBP23.67■■□□□ 1.38
EPHB3-202ENST00000473079 JAKMIP3Q5VZ66 844 aa23.67■■□□□ 1.38
EPHB3-202ENST00000473079 TAF2Q6P1X5 1199 aa23.67■■□□□ 1.38
EPHB3-202ENST00000473079 ZNF274Q96GC6 653 aaPredicted RBP23.67■■□□□ 1.38
EPHB3-202ENST00000473079 PCYT2Q99447 389 aa23.67■■□□□ 1.38
EPHB3-202ENST00000473079 CHD7Q9P2D1 2997 aa23.67■■□□□ 1.38
EPHB3-202ENST00000473079 MBLAC1A4D2B0 266 aaPredicted RBP23.66■■□□□ 1.38
EPHB3-202ENST00000473079 GJB5O95377 273 aa23.66■■□□□ 1.38
EPHB3-202ENST00000473079 DEFB103AP81534 67 aa23.66■■□□□ 1.38
EPHB3-202ENST00000473079 TAP1Q03518 808 aa23.66■■□□□ 1.38
EPHB3-202ENST00000473079 PPFIA1Q13136 1202 aa23.66■■□□□ 1.38
EPHB3-202ENST00000473079 PLPPR4Q7Z2D5 763 aa23.66■■□□□ 1.38
EPHB3-202ENST00000473079 REXO1Q8N1G1 1221 aaKnown RBP23.66■■□□□ 1.38
EPHB3-202ENST00000473079 TNPO1Q92973 898 aaKnown RBP23.66■■□□□ 1.38
EPHB3-202ENST00000473079 IGLV3-22A0A075B6J6 115 aa23.65■■□□□ 1.38
EPHB3-202ENST00000473079 RRN3P2A6NIE6 340 aa23.65■■□□□ 1.38
EPHB3-202ENST00000473079 FAM86B1E9PN63 330 aa23.65■■□□□ 1.38
EPHB3-202ENST00000473079 FAM86B2P0C5J1 330 aa23.65■■□□□ 1.38
EPHB3-202ENST00000473079 POU3F3P20264 500 aaPredicted RBP23.65■■□□□ 1.38
EPHB3-202ENST00000473079 ACTR2P61160 394 aa23.65■■□□□ 1.38
EPHB3-202ENST00000473079 GRIK4Q16099 956 aa23.65■■□□□ 1.38
EPHB3-202ENST00000473079 MARCH8Q5T0T0 291 aa23.65■■□□□ 1.38
EPHB3-202ENST00000473079 USP38Q8NB14 1042 aa23.65■■□□□ 1.38
EPHB3-202ENST00000473079 CCDC148Q8NFR7 591 aa23.65■■□□□ 1.38
EPHB3-202ENST00000473079 BICD2Q8TD16 824 aa23.65■■□□□ 1.38
EPHB3-202ENST00000473079 RAD9AQ99638 391 aa23.65■■□□□ 1.38
EPHB3-202ENST00000473079 ZBED2Q9BTP6 218 aa23.65■■□□□ 1.38
EPHB3-202ENST00000473079 AZI2Q9H6S1 392 aa23.65■■□□□ 1.38
EPHB3-202ENST00000473079 SH3GLB2Q9NR46 395 aa23.65■■□□□ 1.38
EPHB3-202ENST00000473079 ADAMTS3O15072 1205 aa23.64■■□□□ 1.37
EPHB3-202ENST00000473079 CCT2P78371 535 aaKnown RBP23.64■■□□□ 1.37
EPHB3-202ENST00000473079 PLA2G4DQ86XP0 818 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms