RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 SNRNP48Q6IEG0 339 aaKnown RBP7.37□□□□□ -1.23
HDAC1-205ENST00000472928 C16orf86Q6ZW13 317 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 MICU3Q86XE3 530 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 IQCA1Q86XH1 822 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 RAB11FIP4Q86YS3 637 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 RPUSD2Q8IZ73 545 aaKnown RBP7.37□□□□□ -1.23
HDAC1-205ENST00000472928 FBXL16Q8N461 479 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 FAM174AQ8TBP5 190 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 ARNTL2Q8WYA1 636 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 DDX11Q96FC9 970 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 NUP88Q99567 741 aaPredicted RBP7.37□□□□□ -1.23
HDAC1-205ENST00000472928 ZKSCAN3Q9BRR0 538 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 SPC25Q9HBM1 224 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 CHMP5Q9NZZ3 219 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 ZSWIM5Q9P217 1185 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 SWAP70Q9UH65 585 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 SMC3Q9UQE7 1217 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 GNEQ9Y223 722 aaKnown RBP7.37□□□□□ -1.23
HDAC1-205ENST00000472928 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.37□□□□□ -1.23
HDAC1-205ENST00000472928 GVINP1Q7Z2Y8 2422 aa7.37□□□□□ -1.23
HDAC1-205ENST00000472928 TECTAO75443 2155 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 NID2Q14112 1375 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 USP34Q70CQ2 3546 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 SCN5AQ14524 2016 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 CCDC69A6NI79 296 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 GOLGA8AA7E2F4 631 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 ATP2A1O14983 1001 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 CABYRO75952 493 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 FGRP09769 529 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 CDK8P49336 464 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 METAP2P50579 478 aaKnown RBP eCLIP7.36□□□□□ -1.23
HDAC1-205ENST00000472928 MCCD1P59942 119 aaPredicted RBP7.36□□□□□ -1.23
HDAC1-205ENST00000472928 PSMC6P62333 389 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 CCT2P78371 535 aaKnown RBP7.36□□□□□ -1.23
HDAC1-205ENST00000472928 SCRN1Q12765 414 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 APOA5Q6Q788 366 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 CCDC144CPQ8IYA2 1237 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 ENAHQ8N8S7 591 aaPredicted RBP7.36□□□□□ -1.23
HDAC1-205ENST00000472928 ADAM32Q8TC27 787 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 ZNF592Q92610 1267 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 ZNF274Q96GC6 653 aaPredicted RBP7.36□□□□□ -1.23
HDAC1-205ENST00000472928 CCDC17Q96LX7 622 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 ZSCAN10Q96SZ4 725 aaPredicted RBP7.36□□□□□ -1.23
HDAC1-205ENST00000472928 SLF1Q9BQI6 1058 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 MTA3Q9BTC8 594 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 MYL10Q9BUA6 226 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 MKNK2Q9HBH9 465 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 ZNF287Q9HBT7 754 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 SENP2Q9HC62 589 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 NCOA5Q9HCD5 579 aaKnown RBP7.36□□□□□ -1.23
HDAC1-205ENST00000472928 TRMT13Q9NUP7 481 aaKnown RBP7.36□□□□□ -1.23
HDAC1-205ENST00000472928 BRPF3Q9ULD4 1205 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 PCDHB9Q9Y5E1 797 aa7.36□□□□□ -1.23
HDAC1-205ENST00000472928 PTPDC1A2A3K4 754 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 ZBTB43O43298 467 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 NMT2O60551 498 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 JAK2O60674 1132 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 DTNBO60941 627 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 PFKMP08237 780 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 TSPY3P0CV98 308 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 TSPY8P0CW00 308 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 CYP2C9P11712 490 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 SKIP12755 728 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 SMPD1P17405 629 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 RXRAP19793 462 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 RASA1P20936 1047 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 GJB2P29033 226 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 PDIA3P30101 505 aaKnown RBP7.35□□□□□ -1.23
HDAC1-205ENST00000472928 LIFRP42702 1097 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 NT5C2P49902 561 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 EVCP57679 992 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 CNTN2Q02246 1040 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 TNFAIP2Q03169 654 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 SEC23AQ15436 765 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 FSCN1Q16658 493 aaKnown RBP7.35□□□□□ -1.23
HDAC1-205ENST00000472928 TMEM63BQ5T3F8 832 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 IFIT1BQ5T764 474 aaKnown RBP7.35□□□□□ -1.23
HDAC1-205ENST00000472928 DEFB128Q7Z7B8 93 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 TLK2Q86UE8 772 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 SGMS1Q86VZ5 419 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 HERC6Q8IVU3 1022 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 FAM178BQ8IXR5 827 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 ZNF654Q8IZM8 581 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 GJD3Q8N144 294 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 FAM133AQ8N9E0 248 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 IGDCC4Q8TDY8 1250 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 FBXL18Q96ME1 805 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 SLC9A7Q96T83 725 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 ARHGAP9Q9BRR9 750 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 KANSL2Q9H9L4 492 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 RAVER2Q9HCJ3 691 aaKnown RBP7.35□□□□□ -1.23
HDAC1-205ENST00000472928 SLC12A7Q9Y666 1083 aa7.35□□□□□ -1.23
HDAC1-205ENST00000472928 DDX49Q9Y6V7 483 aaKnown RBP7.35□□□□□ -1.23
HDAC1-205ENST00000472928 TPRP12270 2363 aaKnown RBP7.35□□□□□ -1.23
HDAC1-205ENST00000472928 COL4A4P53420 1690 aaPredicted RBP7.35□□□□□ -1.23
HDAC1-205ENST00000472928 EPG5Q9HCE0 2579 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 SCN10AQ9Y5Y9 1956 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.34□□□□□ -1.23
HDAC1-205ENST00000472928 LCHNA4D1U4 455 aa7.34□□□□□ -1.23
HDAC1-205ENST00000472928 CPLX1O14810 134 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms