RNA–Protein interactions for RNA: ENST00000472558.6

IFFO1-208, Transcript of intermediate filament family orphan 1, humanhuman

TSL 2

Gene IFFO1, Length 2,571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-208ENST00000472558 CNNM4Q6P4Q7 775 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 DYMQ7RTS9 669 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 FMNL3Q8IVF7 1028 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 CHMP6Q96FZ7 201 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 XPO6Q96QU8 1125 aaKnown RBP15.3■□□□□ 0.04
IFFO1-208ENST00000472558 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.3■□□□□ 0.04
IFFO1-208ENST00000472558 CELF4Q9BZC1 486 aaKnown RBP15.3■□□□□ 0.04
IFFO1-208ENST00000472558 TANGO6Q9C0B7 1094 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.3■□□□□ 0.04
IFFO1-208ENST00000472558 EME2A4GXA9 379 aaPredicted RBP15.3■□□□□ 0.04
IFFO1-208ENST00000472558 MYMKA6NI61 221 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 KCNQ2O43526 872 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 CEP104O60308 925 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 SERPING1P05155 500 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 CLTAP09496 248 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 TECP42680 631 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 KRT71Q3SY84 523 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 COBLL1Q53SF7 1204 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 SFMBT2Q5VUG0 894 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 EIF1ADQ8N9N8 165 aaKnown RBP15.3■□□□□ 0.04
IFFO1-208ENST00000472558 MARCH10Q8NA82 808 aaPredicted RBP15.3■□□□□ 0.04
IFFO1-208ENST00000472558 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.3■□□□□ 0.04
IFFO1-208ENST00000472558 PANK4Q9NVE7 773 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 SLC12A4Q9UP95 1085 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 AGAP1Q9UPQ3 857 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 ATP6V0A2Q9Y487 856 aa15.3■□□□□ 0.04
IFFO1-208ENST00000472558 SLIT2O94813 1529 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 F8VZ95 297 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 BUB1BO60566 1050 aaPredicted RBP15.29■□□□□ 0.04
IFFO1-208ENST00000472558 CTNND1O60716 968 aaKnown RBP15.29■□□□□ 0.04
IFFO1-208ENST00000472558 CAND2O75155 1236 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 ANP32DO95626 131 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 NBPF9Q3BBW0 867 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 TBC1D1Q86TI0 1168 aaPredicted RBP15.29■□□□□ 0.04
IFFO1-208ENST00000472558 PNMA8AQ86V59 439 aaPredicted RBP15.29■□□□□ 0.04
IFFO1-208ENST00000472558 CCDC47Q96A33 483 aaKnown RBP15.29■□□□□ 0.04
IFFO1-208ENST00000472558 PSMD1Q99460 953 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 CUEDC2Q9H467 287 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 BLOC1S4Q9NUP1 217 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 KIF4AO95239 1232 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 CYP2D6P10635 497 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 SLC8A3P57103 927 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 RPS6KA1Q15418 735 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 SLC4A8Q2Y0W8 1093 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 C11orf91Q3C1V1 193 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 TMED8Q6PL24 325 aaPredicted RBP15.29■□□□□ 0.04
IFFO1-208ENST00000472558 ARMC9Q7Z3E5 817 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 METTL13Q8N6R0 699 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 AGAP11Q8TF27 550 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 TLCD1Q96CP7 247 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 FAM129AQ9BZQ8 928 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 KCNMB3Q9NPA1 279 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 TCP11L1Q9NUJ3 509 aa15.29■□□□□ 0.04
IFFO1-208ENST00000472558 TOGARAM1Q9Y4F4 1720 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 TTI1O43156 1089 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 CYTH3O43739 400 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 SHBGP04278 402 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 DHX9Q08211 1270 aaKnown RBP15.28■□□□□ 0.04
IFFO1-208ENST00000472558 FAM133AQ8N9E0 248 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 ZNF483Q8TF39 744 aaPredicted RBP15.28■□□□□ 0.04
IFFO1-208ENST00000472558 HOOK2Q96ED9 719 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 ADAM7Q9H2U9 754 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 CEP72Q9P209 647 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 USP21Q9UK80 565 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 SPATA31A5Q5VU36 1347 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 SPATA31A7Q8IWB4 1347 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 CACNA1SQ13698 1873 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 COL1A1P02452 1464 aaPredicted RBP15.28■□□□□ 0.04
IFFO1-208ENST00000472558 CHN1P15882 459 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 PRPHP41219 470 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 BZW1Q7L1Q6 419 aaKnown RBP15.28■□□□□ 0.04
IFFO1-208ENST00000472558 CCDC63Q8NA47 563 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 CCDC197Q8NCU1 140 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 P3H4Q92791 437 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 RSRC1Q96IZ7 334 aaKnown RBP15.28■□□□□ 0.04
IFFO1-208ENST00000472558 ZNF570Q96NI8 536 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 DPH5Q9H2P9 285 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 MAGEF1Q9HAY2 307 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 C15orf41Q9Y2V0 281 aa15.28■□□□□ 0.04
IFFO1-208ENST00000472558 NOC2LQ9Y3T9 749 aaKnown RBP15.28■□□□□ 0.04
IFFO1-208ENST00000472558 PDE6BP35913 854 aa15.27■□□□□ 0.04
IFFO1-208ENST00000472558 USP11P51784 963 aa15.27■□□□□ 0.04
IFFO1-208ENST00000472558 NKX1-1Q15270 411 aaPredicted RBP15.27■□□□□ 0.04
IFFO1-208ENST00000472558 LETM2Q2VYF4 491 aa15.27■□□□□ 0.04
IFFO1-208ENST00000472558 FAM133BQ5BKY9 247 aaKnown RBP15.27■□□□□ 0.04
IFFO1-208ENST00000472558 PIGWQ7Z7B1 504 aa15.27■□□□□ 0.04
IFFO1-208ENST00000472558 TAX1BP1Q86VP1 789 aa15.27■□□□□ 0.04
IFFO1-208ENST00000472558 CEP120Q8N960 986 aa15.27■□□□□ 0.04
IFFO1-208ENST00000472558 ACTRT1Q8TDG2 376 aa15.27■□□□□ 0.04
IFFO1-208ENST00000472558 LMBR1Q8WVP7 490 aa15.27■□□□□ 0.04
IFFO1-208ENST00000472558 SPDL1Q96EA4 605 aa15.27■□□□□ 0.04
IFFO1-208ENST00000472558 LSM14BQ9BX40 385 aaKnown RBP15.27■□□□□ 0.04
IFFO1-208ENST00000472558 BRIP1Q9BX63 1249 aa15.27■□□□□ 0.04
IFFO1-208ENST00000472558 EDEM3Q9BZQ6 932 aa15.27■□□□□ 0.04
IFFO1-208ENST00000472558 EPB41L4BQ9H329 900 aa15.27■□□□□ 0.04
IFFO1-208ENST00000472558 GGT7Q9UJ14 662 aa15.27■□□□□ 0.04
IFFO1-208ENST00000472558 NR2E1Q9Y466 385 aa15.27■□□□□ 0.04
IFFO1-208ENST00000472558 ABCB11O95342 1321 aa15.27■□□□□ 0.03
IFFO1-208ENST00000472558 CCNT1O60563 726 aaKnown RBP15.27■□□□□ 0.03
IFFO1-208ENST00000472558 OR52Z1P0C646 297 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms