RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 GJA10Q969M2 543 aa18.96■□□□□ 0.63
CCM2-205ENST00000472223 AZI2Q9H6S1 392 aa18.96■□□□□ 0.63
CCM2-205ENST00000472223 DISC1Q9NRI5 854 aa18.96■□□□□ 0.63
CCM2-205ENST00000472223 GNEQ9Y223 722 aaKnown RBP18.96■□□□□ 0.63
CCM2-205ENST00000472223 PCDHA10Q9Y5I2 948 aa18.96■□□□□ 0.63
CCM2-205ENST00000472223 BACH1O14867 736 aa18.95■□□□□ 0.62
CCM2-205ENST00000472223 KPNA6O60684 536 aa18.95■□□□□ 0.62
CCM2-205ENST00000472223 C6orf222P0C671 652 aaPredicted RBP18.95■□□□□ 0.62
CCM2-205ENST00000472223 ACTR2P61160 394 aa18.95■□□□□ 0.62
CCM2-205ENST00000472223 ARHGAP1Q07960 439 aa18.95■□□□□ 0.62
CCM2-205ENST00000472223 DGKDQ16760 1214 aa18.95■□□□□ 0.62
CCM2-205ENST00000472223 FAM160B1Q5W0V3 765 aa18.95■□□□□ 0.62
CCM2-205ENST00000472223 ZNF579Q8NAF0 562 aaKnown RBP18.95■□□□□ 0.62
CCM2-205ENST00000472223 ARRDC4Q8NCT1 418 aa18.95■□□□□ 0.62
CCM2-205ENST00000472223 NEK9Q8TD19 979 aa18.95■□□□□ 0.62
CCM2-205ENST00000472223 CDK5RAP3Q96JB5 506 aa18.95■□□□□ 0.62
CCM2-205ENST00000472223 TMEM106CQ9BVX2 250 aa18.95■□□□□ 0.62
CCM2-205ENST00000472223 MCOLN1Q9GZU1 580 aa18.95■□□□□ 0.62
CCM2-205ENST00000472223 UNC93B1Q9H1C4 597 aa18.95■□□□□ 0.62
CCM2-205ENST00000472223 UNC45AQ9H3U1 944 aa18.95■□□□□ 0.62
CCM2-205ENST00000472223 FAM13BQ9NYF5 915 aa18.95■□□□□ 0.62
CCM2-205ENST00000472223 FBXO2Q9UK22 296 aaPredicted RBP18.95■□□□□ 0.62
CCM2-205ENST00000472223 PPFIA4O75335 1185 aa18.94■□□□□ 0.62
CCM2-205ENST00000472223 GJA9P57773 515 aa18.94■□□□□ 0.62
CCM2-205ENST00000472223 EPHA7Q15375 998 aa18.94■□□□□ 0.62
CCM2-205ENST00000472223 GNASQ5JWF2 1037 aa18.94■□□□□ 0.62
CCM2-205ENST00000472223 GJC2Q5T442 439 aaPredicted RBP18.94■□□□□ 0.62
CCM2-205ENST00000472223 CLEC17AQ6ZS10 378 aa18.94■□□□□ 0.62
CCM2-205ENST00000472223 AFG1LQ8WV93 481 aa18.94■□□□□ 0.62
CCM2-205ENST00000472223 ARMC5Q96C12 935 aa18.94■□□□□ 0.62
CCM2-205ENST00000472223 CALML4Q96GE6 196 aa18.94■□□□□ 0.62
CCM2-205ENST00000472223 GDPD2Q9HCC8 539 aa18.94■□□□□ 0.62
CCM2-205ENST00000472223 CCDC39Q9UFE4 941 aa18.94■□□□□ 0.62
CCM2-205ENST00000472223 VAV3Q9UKW4 847 aa18.94■□□□□ 0.62
CCM2-205ENST00000472223 PCDHA7Q9UN72 937 aa18.94■□□□□ 0.62
CCM2-205ENST00000472223 DOCK5Q9H7D0 1870 aa18.94■□□□□ 0.62
CCM2-205ENST00000472223 CAPN2P17655 700 aa18.93■□□□□ 0.62
CCM2-205ENST00000472223 FSCN1Q16658 493 aaKnown RBP18.93■□□□□ 0.62
CCM2-205ENST00000472223 HSDL1Q3SXM5 330 aa18.93■□□□□ 0.62
CCM2-205ENST00000472223 ADALQ6DHV7 355 aa18.93■□□□□ 0.62
CCM2-205ENST00000472223 IGSF22Q8N9C0 903 aa18.93■□□□□ 0.62
CCM2-205ENST00000472223 PCSK9Q8NBP7 692 aaKnown RBP18.93■□□□□ 0.62
CCM2-205ENST00000472223 GLG1Q92896 1179 aa18.93■□□□□ 0.62
CCM2-205ENST00000472223 ATP6V0A1Q93050 837 aa18.93■□□□□ 0.62
CCM2-205ENST00000472223 ZNF333Q96JL9 665 aa18.93■□□□□ 0.62
CCM2-205ENST00000472223 CHAMP1Q96JM3 812 aa18.93■□□□□ 0.62
CCM2-205ENST00000472223 GPR20Q99678 358 aa18.93■□□□□ 0.62
CCM2-205ENST00000472223 CSRNP2Q9H175 543 aa18.93■□□□□ 0.62
CCM2-205ENST00000472223 POTEMA6NI47 508 aa18.92■□□□□ 0.62
CCM2-205ENST00000472223 SLC26A4O43511 780 aa18.92■□□□□ 0.62
CCM2-205ENST00000472223 P4HBP07237 508 aaKnown RBP18.92■□□□□ 0.62
CCM2-205ENST00000472223 SUPT20HL2P0C7V6 817 aa18.92■□□□□ 0.62
CCM2-205ENST00000472223 TCF7P36402 384 aaPredicted RBP18.92■□□□□ 0.62
CCM2-205ENST00000472223 CCT6AP40227 531 aaKnown RBP18.92■□□□□ 0.62
CCM2-205ENST00000472223 ZRSR1Q15695 479 aaKnown RBP18.92■□□□□ 0.62
CCM2-205ENST00000472223 TPRNQ4KMQ1 711 aa18.92■□□□□ 0.62
CCM2-205ENST00000472223 TMEM63BQ5T3F8 832 aa18.92■□□□□ 0.62
CCM2-205ENST00000472223 UTP14CQ5TAP6 766 aaKnown RBP18.92■□□□□ 0.62
CCM2-205ENST00000472223 SNX29Q8TEQ0 813 aa18.92■□□□□ 0.62
CCM2-205ENST00000472223 CLIC6Q96NY7 704 aa18.92■□□□□ 0.62
CCM2-205ENST00000472223 DEFB118Q96PH6 123 aa18.92■□□□□ 0.62
CCM2-205ENST00000472223 SMARCAD1Q9H4L7 1026 aa18.92■□□□□ 0.62
CCM2-205ENST00000472223 ZNF302Q9NR11 478 aa18.92■□□□□ 0.62
CCM2-205ENST00000472223 ZNF215Q9UL58 517 aaPredicted RBP18.92■□□□□ 0.62
CCM2-205ENST00000472223 SYNRGQ9UMZ2 1314 aa18.92■□□□□ 0.62
CCM2-205ENST00000472223 KDM3AQ9Y4C1 1321 aa18.92■□□□□ 0.62
CCM2-205ENST00000472223 A6NJR5 290 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 ADCY6O43306 1168 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 CCNE2O96020 404 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 PGK1P00558 417 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 TFRCP02786 760 aaKnown RBP18.91■□□□□ 0.62
CCM2-205ENST00000472223 MMP3P08254 477 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 MYL3P08590 195 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 STAT5BP51692 787 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 MTFR1Q15390 333 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 IL17AQ16552 155 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 SWSAP1Q6NVH7 229 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 ABHD15Q6UXT9 468 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 CABP7Q86V35 215 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 CKAP2LQ8IYA6 745 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 LENG1Q96BZ8 264 aaPredicted RBP18.91■□□□□ 0.62
CCM2-205ENST00000472223 EIF2AK1Q9BQI3 630 aaKnown RBP18.91■□□□□ 0.62
CCM2-205ENST00000472223 PYM1Q9BRP8 204 aaKnown RBP18.91■□□□□ 0.62
CCM2-205ENST00000472223 NT5C3AQ9H0P0 336 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 UPF3AQ9H1J1 476 aaKnown RBP18.91■□□□□ 0.62
CCM2-205ENST00000472223 BCAS3Q9H6U6 928 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 TUFT1Q9NNX1 390 aa18.91■□□□□ 0.62
CCM2-205ENST00000472223 PAK6Q9NQU5 681 aaPredicted RBP18.91■□□□□ 0.62
CCM2-205ENST00000472223 GSTTP1A0A1W2PQM5 241 aa18.9■□□□□ 0.62
CCM2-205ENST00000472223 KBTBD13C9JR72 458 aa18.9■□□□□ 0.62
CCM2-205ENST00000472223 PRPF40AO75400 957 aaKnown RBP18.9■□□□□ 0.62
CCM2-205ENST00000472223 ATG7O95352 703 aa18.9■□□□□ 0.62
CCM2-205ENST00000472223 MUTP22033 750 aa18.9■□□□□ 0.62
CCM2-205ENST00000472223 QARSP47897 775 aaKnown RBP18.9■□□□□ 0.62
CCM2-205ENST00000472223 SLC26A2P50443 739 aa18.9■□□□□ 0.62
CCM2-205ENST00000472223 PSMC5P62195 406 aa18.9■□□□□ 0.62
CCM2-205ENST00000472223 SPIRE1Q08AE8 756 aa18.9■□□□□ 0.62
CCM2-205ENST00000472223 PDXDC2PQ6P474 469 aa18.9■□□□□ 0.62
CCM2-205ENST00000472223 B3GNT9Q6UX72 402 aa18.9■□□□□ 0.62
CCM2-205ENST00000472223 TPH2Q8IWU9 490 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms