RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 CLEC4DQ8WXI8 215 aa12.04□□□□□ -0.48
CDHR3-209ENST00000472116 ZNF689Q96CS4 500 aaPredicted RBP12.04□□□□□ -0.48
CDHR3-209ENST00000472116 PUS7LQ9H0K6 701 aaKnown RBP12.04□□□□□ -0.48
CDHR3-209ENST00000472116 BOLA2Q9H3K6 86 aa12.04□□□□□ -0.48
CDHR3-209ENST00000472116 RC3H2Q9HBD1 1191 aaKnown RBP12.04□□□□□ -0.48
CDHR3-209ENST00000472116 FBXL21Q9UKT6 434 aa12.04□□□□□ -0.48
CDHR3-209ENST00000472116 CDV3Q9UKY7 258 aaKnown RBP12.04□□□□□ -0.48
CDHR3-209ENST00000472116 PCDHB12Q9Y5F1 795 aa12.04□□□□□ -0.48
CDHR3-209ENST00000472116 USP24Q9UPU5 2620 aa12.04□□□□□ -0.48
CDHR3-209ENST00000472116 TSPY2A6NKD2 308 aa12.03□□□□□ -0.48
CDHR3-209ENST00000472116 GSG1L2A8MUP6 293 aa12.03□□□□□ -0.48
CDHR3-209ENST00000472116 C2CD4DB7Z1M9 353 aa12.03□□□□□ -0.48
CDHR3-209ENST00000472116 RBAK-RBAKDNI3L0D1 243 aa12.03□□□□□ -0.48
CDHR3-209ENST00000472116 TREHO43280 583 aa12.03□□□□□ -0.48
CDHR3-209ENST00000472116 SLC16A2P36021 539 aa12.03□□□□□ -0.48
CDHR3-209ENST00000472116 RBM10P98175 930 aaKnown RBP12.03□□□□□ -0.48
CDHR3-209ENST00000472116 DMWDQ09019 674 aa12.03□□□□□ -0.48
CDHR3-209ENST00000472116 PAN2Q504Q3 1202 aaKnown RBP12.03□□□□□ -0.48
CDHR3-209ENST00000472116 CWF19L1Q69YN2 538 aaKnown RBP12.03□□□□□ -0.48
CDHR3-209ENST00000472116 PLCD3Q8N3E9 789 aa12.03□□□□□ -0.48
CDHR3-209ENST00000472116 GPR161Q8N6U8 529 aaKnown RBP12.03□□□□□ -0.48
CDHR3-209ENST00000472116 COL26A1Q96A83 441 aa12.03□□□□□ -0.48
CDHR3-209ENST00000472116 SPATA33Q96N06 139 aa12.03□□□□□ -0.48
CDHR3-209ENST00000472116 STRBPQ96SI9 672 aaKnown RBP12.03□□□□□ -0.48
CDHR3-209ENST00000472116 IWS1Q96ST2 819 aa12.03□□□□□ -0.48
CDHR3-209ENST00000472116 AAASQ9NRG9 546 aa12.03□□□□□ -0.48
CDHR3-209ENST00000472116 NCDNQ9UBB6 729 aa12.03□□□□□ -0.48
CDHR3-209ENST00000472116 DDX41Q9UJV9 622 aaKnown RBP12.03□□□□□ -0.48
CDHR3-209ENST00000472116 ASGR2P07307 311 aa12.02□□□□□ -0.49
CDHR3-209ENST00000472116 STAG3L1P0CL83 205 aa12.02□□□□□ -0.49
CDHR3-209ENST00000472116 SMIM10L2AP0DMW4 78 aa12.02□□□□□ -0.49
CDHR3-209ENST00000472116 SMIM10L2BP0DMW5 78 aa12.02□□□□□ -0.49
CDHR3-209ENST00000472116 GNAT2P19087 354 aa12.02□□□□□ -0.49
CDHR3-209ENST00000472116 HIC1Q14526 733 aa12.02□□□□□ -0.49
CDHR3-209ENST00000472116 DCLK2Q8N568 766 aa12.02□□□□□ -0.49
CDHR3-209ENST00000472116 RHPN1Q8TCX5 695 aa12.02□□□□□ -0.49
CDHR3-209ENST00000472116 SECISBP2LQ93073 1101 aaKnown RBP12.02□□□□□ -0.49
CDHR3-209ENST00000472116 NACAP1Q9BZK3 213 aa12.02□□□□□ -0.49
CDHR3-209ENST00000472116 S1PR5Q9H228 398 aa12.02□□□□□ -0.49
CDHR3-209ENST00000472116 SMOC2Q9H3U7 446 aa12.02□□□□□ -0.49
CDHR3-209ENST00000472116 WDR19Q8NEZ3 1342 aa12.02□□□□□ -0.49
CDHR3-209ENST00000472116 FNDC1Q4ZHG4 1894 aaPredicted RBP12.02□□□□□ -0.49
CDHR3-209ENST00000472116 PRR5-ARHGAP8B1AHC4 643 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 H3BRB1 525 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 ENPP3O14638 875 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 PI15O43692 258 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 GHRP10912 638 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 MTHFRP42898 656 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 ARHGAP8P85298 464 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 ITIH3Q06033 890 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 USH1GQ495M9 461 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 ARHGEF16Q5VV41 709 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 LLGL2Q6P1M3 1020 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 KCNV1Q6PIU1 500 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 BTNL9Q6UXG8 535 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 TMEM184AQ6ZMB5 413 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 RUFY4Q6ZNE9 571 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 RSPH3Q86UC2 560 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 TMEM57Q8N5G2 664 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 VN1R2Q8NFZ6 395 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 CASP10Q92851 521 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 KIF1BPQ96EK5 621 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 RMDN3Q96TC7 470 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 TUT1Q9H6E5 874 aaKnown RBP12.01□□□□□ -0.49
CDHR3-209ENST00000472116 LRFN2Q9ULH4 789 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 CCDC171Q6TFL3 1326 aa12.01□□□□□ -0.49
CDHR3-209ENST00000472116 FASNP49327 2511 aaKnown RBP12.01□□□□□ -0.49
CDHR3-209ENST00000472116 ZNF316A6NFI3 1004 aaPredicted RBP12□□□□□ -0.49
CDHR3-209ENST00000472116 KINO60870 393 aaKnown RBP12□□□□□ -0.49
CDHR3-209ENST00000472116 EIF3JO75822 258 aaKnown RBP12□□□□□ -0.49
CDHR3-209ENST00000472116 CHGBP05060 677 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 ADRB1P08588 477 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 HOXD8P13378 290 aaPredicted RBP12□□□□□ -0.49
CDHR3-209ENST00000472116 ATXN1P54253 815 aaKnown RBP12□□□□□ -0.49
CDHR3-209ENST00000472116 LMNB2Q03252 620 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 FAM26DQ5JW98 314 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 TTBK2Q6IQ55 1244 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 SYCE2Q6PIF2 218 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 RASGRP2Q7LDG7 609 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 NPAS4Q8IUM7 802 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 THNSL1Q8IYQ7 743 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 ZDHHC14Q8IZN3 488 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
CDHR3-209ENST00000472116 RGS22Q8NE09 1264 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 RIN2Q8WYP3 895 aaPredicted RBP12□□□□□ -0.49
CDHR3-209ENST00000472116 RTKNQ9BST9 563 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 OSBPL7Q9BZF2 842 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 MAF1Q9H063 256 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 RNPEPQ9H4A4 650 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 POMKQ9H5K3 350 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 GPCPD1Q9NPB8 672 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 SH2B1Q9NRF2 756 aaPredicted RBP12□□□□□ -0.49
CDHR3-209ENST00000472116 LIMD1Q9UGP4 676 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 DOCK5Q9H7D0 1870 aa12□□□□□ -0.49
CDHR3-209ENST00000472116 MIA3Q5JRA6 1907 aa11.99□□□□□ -0.49
CDHR3-209ENST00000472116 CACNA1IQ9P0X4 2223 aa11.99□□□□□ -0.49
CDHR3-209ENST00000472116 NOP56O00567 594 aaKnown RBP11.99□□□□□ -0.49
CDHR3-209ENST00000472116 SORBS3O60504 671 aa11.99□□□□□ -0.49
CDHR3-209ENST00000472116 ATP5JP18859 108 aa11.99□□□□□ -0.49
CDHR3-209ENST00000472116 MCF2L2Q86YR7 1114 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms