RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 MIB1Q86YT6 1006 aa5.34□□□□□ -1.55
PTCD3-209ENST00000472044 ATL2Q8NHH9 583 aa5.34□□□□□ -1.55
PTCD3-209ENST00000472044 CHTF18Q8WVB6 975 aa5.34□□□□□ -1.55
PTCD3-209ENST00000472044 FAM168AQ92567 244 aa5.34□□□□□ -1.55
PTCD3-209ENST00000472044 CD244Q9BZW8 370 aa5.34□□□□□ -1.55
PTCD3-209ENST00000472044 RXFP1Q9HBX9 757 aa5.34□□□□□ -1.55
PTCD3-209ENST00000472044 OXSMQ9NWU1 459 aa5.34□□□□□ -1.55
PTCD3-209ENST00000472044 DBR1Q9UK59 544 aaKnown RBP5.34□□□□□ -1.55
PTCD3-209ENST00000472044 SPO11Q9Y5K1 396 aa5.34□□□□□ -1.55
PTCD3-209ENST00000472044 CARMIL2Q6F5E8 1435 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 H7C1D1 291 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 DVL2O14641 736 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 PEX10O60683 326 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 HIP1RO75146 1068 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 PTPN1P18031 435 aaKnown RBP5.33□□□□□ -1.56
PTCD3-209ENST00000472044 SDHAP31040 664 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 KPNA1P52294 538 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-209ENST00000472044 IL2P60568 153 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 ARRDC4Q8NCT1 418 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 STAG1Q8WVM7 1258 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 EMC7Q9NPA0 242 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 ACSS2Q9NR19 701 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 KCNH7Q9NS40 1196 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 SPTLC3Q9NUV7 552 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 THG1LQ9NWX6 298 aaKnown RBP5.33□□□□□ -1.56
PTCD3-209ENST00000472044 DDX56Q9NY93 547 aaKnown RBP5.33□□□□□ -1.56
PTCD3-209ENST00000472044 FAM53CQ9NYF3 392 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 HCFC2Q9Y5Z7 792 aa5.33□□□□□ -1.56
PTCD3-209ENST00000472044 IRS2Q9Y4H2 1338 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 FAM90A27PA6NNH2 459 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 ACOT7O00154 380 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 KCNK3O14649 394 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 BUB1BO60566 1050 aaPredicted RBP5.32□□□□□ -1.56
PTCD3-209ENST00000472044 LTFP02788 710 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 C4BPAP04003 597 aaKnown RBP5.32□□□□□ -1.56
PTCD3-209ENST00000472044 CYP17A1P05093 508 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 FAHP16930 419 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 FBLN1P23142 703 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 ID4P47928 161 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 IRAK1P51617 712 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 HERVK_113P62684 666 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 PHC1P78364 1004 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 FAPQ12884 760 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 SEC23AQ15436 765 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 ZNF174Q15697 407 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 GPR158Q5T848 1215 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 BTBD8Q5XKL5 378 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 FSTL4Q6MZW2 842 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 LHFPL2Q6ZUX7 228 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 C11orf74Q86VG3 221 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 AMIGO3Q86WK7 504 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 SPATS2Q86XZ4 545 aaKnown RBP5.32□□□□□ -1.56
PTCD3-209ENST00000472044 FAM126BQ8IXS8 530 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 CPA5Q8WXQ8 436 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 GPR101Q96P66 508 aaPredicted RBP5.32□□□□□ -1.56
PTCD3-209ENST00000472044 HOMER2Q9NSB8 354 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 DTLQ9NZJ0 730 aa5.32□□□□□ -1.56
PTCD3-209ENST00000472044 WASHC2CQ9Y4E1 1318 aa5.31□□□□□ -1.56
PTCD3-209ENST00000472044 SCDO00767 359 aa5.31□□□□□ -1.56
PTCD3-209ENST00000472044 TGM5O43548 720 aa5.31□□□□□ -1.56
PTCD3-209ENST00000472044 ULK1O75385 1050 aa5.31□□□□□ -1.56
PTCD3-209ENST00000472044 VIPR1P32241 457 aa5.31□□□□□ -1.56
PTCD3-209ENST00000472044 FNTBP49356 437 aa5.31□□□□□ -1.56
PTCD3-209ENST00000472044 KIF11P52732 1056 aa5.31□□□□□ -1.56
PTCD3-209ENST00000472044 ATP13A4Q4VNC1 1196 aa5.31□□□□□ -1.56
PTCD3-209ENST00000472044 PAN2Q504Q3 1202 aaKnown RBP5.31□□□□□ -1.56
PTCD3-209ENST00000472044 CPZQ66K79 652 aa5.31□□□□□ -1.56
PTCD3-209ENST00000472044 PASD1Q8IV76 773 aa5.31□□□□□ -1.56
PTCD3-209ENST00000472044 RBM12BQ8IXT5 1001 aaKnown RBP5.31□□□□□ -1.56
PTCD3-209ENST00000472044 KIAA1958Q8N8K9 716 aa5.31□□□□□ -1.56
PTCD3-209ENST00000472044 PUS7LQ9H0K6 701 aaKnown RBP5.31□□□□□ -1.56
PTCD3-209ENST00000472044 NGRNQ9NPE2 291 aaKnown RBP5.31□□□□□ -1.56
PTCD3-209ENST00000472044 SLC5A4Q9NY91 659 aa5.31□□□□□ -1.56
PTCD3-209ENST00000472044 H2AFY2Q9P0M6 372 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-209ENST00000472044 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-209ENST00000472044 K7ESF4 209 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 KRT37O76014 449 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 LRG1P02750 347 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 PDGFRBP09619 1106 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 SLC9A1P19634 815 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 GUCY2FP51841 1108 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 EVA1CP58658 441 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 SMAD3P84022 425 aaKnown RBP5.3□□□□□ -1.56
PTCD3-209ENST00000472044 EXOSC10Q01780 885 aaKnown RBP5.3□□□□□ -1.56
PTCD3-209ENST00000472044 LRRC32Q14392 662 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 SMAD2Q15796 467 aaKnown RBP5.3□□□□□ -1.56
PTCD3-209ENST00000472044 MPZL3Q6UWV2 235 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 ETV3LQ6ZN32 361 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 TMC6Q7Z403 805 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 ZZZ3Q8IYH5 903 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 ALG3Q92685 438 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 TOE1Q96GM8 510 aaKnown RBP5.3□□□□□ -1.56
PTCD3-209ENST00000472044 LIN37Q96GY3 246 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-209ENST00000472044 C16orf92Q96LL3 132 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 ELF4Q99607 663 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-209ENST00000472044 RNF38Q9H0F5 515 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 PCIF1Q9H4Z3 704 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 RIC8BQ9NVN3 520 aa5.3□□□□□ -1.56
PTCD3-209ENST00000472044 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms