RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 HOXD10P28358 340 aa21.82■■□□□ 1.08
CHMP2B-204ENST00000472024 FLT3LGP49771 235 aa21.82■■□□□ 1.08
CHMP2B-204ENST00000472024 PRMT2P55345 433 aa21.82■■□□□ 1.08
CHMP2B-204ENST00000472024 ACVR2BQ13705 512 aa21.82■■□□□ 1.08
CHMP2B-204ENST00000472024 LONRF3Q496Y0 759 aa21.82■■□□□ 1.08
CHMP2B-204ENST00000472024 NCAPH2Q6IBW4 605 aa21.82■■□□□ 1.08
CHMP2B-204ENST00000472024 CALML4Q96GE6 196 aa21.82■■□□□ 1.08
CHMP2B-204ENST00000472024 EIF2AK1Q9BQI3 630 aaKnown RBP21.82■■□□□ 1.08
CHMP2B-204ENST00000472024 SLC9A2Q9UBY0 812 aa21.82■■□□□ 1.08
CHMP2B-204ENST00000472024 STK17AQ9UEE5 414 aa21.82■■□□□ 1.08
CHMP2B-204ENST00000472024 GABRQQ9UN88 632 aa21.82■■□□□ 1.08
CHMP2B-204ENST00000472024 CTAGE5O15320 804 aa21.81■■□□□ 1.08
CHMP2B-204ENST00000472024 MED24O75448 989 aa21.81■■□□□ 1.08
CHMP2B-204ENST00000472024 LYPLA2O95372 231 aa21.81■■□□□ 1.08
CHMP2B-204ENST00000472024 PRKCZQ05513 592 aa21.81■■□□□ 1.08
CHMP2B-204ENST00000472024 ARHGEF6Q15052 776 aa21.81■■□□□ 1.08
CHMP2B-204ENST00000472024 CCL14Q16627 93 aa21.81■■□□□ 1.08
CHMP2B-204ENST00000472024 CELF3Q5SZQ8 465 aaKnown RBP21.81■■□□□ 1.08
CHMP2B-204ENST00000472024 KANK3Q6NY19 840 aa21.81■■□□□ 1.08
CHMP2B-204ENST00000472024 CAVIN1Q6NZI2 390 aaKnown RBP21.81■■□□□ 1.08
CHMP2B-204ENST00000472024 CATSPER3Q86XQ3 398 aa21.81■■□□□ 1.08
CHMP2B-204ENST00000472024 CD99L2Q8TCZ2 262 aa21.81■■□□□ 1.08
CHMP2B-204ENST00000472024 LRRC15Q8TF66 581 aa21.81■■□□□ 1.08
CHMP2B-204ENST00000472024 UIMC1Q96RL1 719 aa21.81■■□□□ 1.08
CHMP2B-204ENST00000472024 NUP62CLQ9H1M0 184 aa21.81■■□□□ 1.08
CHMP2B-204ENST00000472024 IGKV6D-21A0A0A0MT36 114 aa21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 NKRFO15226 690 aaKnown RBP eCLIP21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 SLITRK3O94933 977 aa21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 ZNF865P0CJ78 1059 aaPredicted RBP21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 PLCG1P19174 1290 aa21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 CCT6AP40227 531 aaKnown RBP21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 MDM2Q00987 491 aaPredicted RBP21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 ECM1Q16610 540 aa21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 RRAGBQ5VZM2 374 aa21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 IQSEC1Q6DN90 963 aa21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 ABHD15Q6UXT9 468 aa21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 EEPD1Q7L9B9 569 aa21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 MIER3Q7Z3K6 550 aa21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 ZNF296Q8WUU4 475 aaPredicted RBP21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 PDGFCQ9NRA1 345 aa21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 BLOC1S4Q9NUP1 217 aa21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 PKD2L1Q9P0L9 805 aa21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 TCEAL9Q9UHQ7 104 aa21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 PCDHA10Q9Y5I2 948 aa21.8■■□□□ 1.08
CHMP2B-204ENST00000472024 P4HBP07237 508 aaKnown RBP21.79■■□□□ 1.08
CHMP2B-204ENST00000472024 DUSP28Q4G0W2 176 aa21.79■■□□□ 1.08
CHMP2B-204ENST00000472024 PDILTQ8N807 584 aa21.79■■□□□ 1.08
CHMP2B-204ENST00000472024 BCAS3Q9H6U6 928 aa21.79■■□□□ 1.08
CHMP2B-204ENST00000472024 KBTBD4Q9NVX7 518 aa21.79■■□□□ 1.08
CHMP2B-204ENST00000472024 SERTAD1Q9UHV2 236 aa21.79■■□□□ 1.08
CHMP2B-204ENST00000472024 LETM1O95202 739 aaPredicted RBP21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 GGPS1O95749 300 aa21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 MYL1P05976 194 aa21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 TXNP10599 105 aaKnown RBP21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 STAT6P42226 847 aa21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 ACTR2P61160 394 aa21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 ARHGAP1Q07960 439 aa21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 LY6KQ17RY6 165 aa21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 TPRNQ4KMQ1 711 aa21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 CNNM4Q6P4Q7 775 aa21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 CYFIP1Q7L576 1253 aa21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 CNNM3Q8NE01 707 aa21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 PXYLP1Q8TE99 480 aa21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 TRIB2Q92519 343 aa21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 DHX58Q96C10 678 aa21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 BEGAINQ9BUH8 593 aa21.78■■□□□ 1.08
CHMP2B-204ENST00000472024 POTEB3A0JP26 581 aa21.77■■□□□ 1.08
CHMP2B-204ENST00000472024 DDX39AO00148 427 aaKnown RBP21.77■■□□□ 1.08
CHMP2B-204ENST00000472024 CHMP2AO43633 222 aa21.77■■□□□ 1.08
CHMP2B-204ENST00000472024 SUPT20HL2P0C7V6 817 aa21.77■■□□□ 1.08
CHMP2B-204ENST00000472024 HOXD8P13378 290 aaPredicted RBP21.77■■□□□ 1.08
CHMP2B-204ENST00000472024 LAMC2Q13753 1193 aa21.77■■□□□ 1.08
CHMP2B-204ENST00000472024 POTEBQ6S5H4 581 aa21.77■■□□□ 1.08
CHMP2B-204ENST00000472024 RAD54LQ92698 747 aa21.77■■□□□ 1.08
CHMP2B-204ENST00000472024 CCDC34Q96HJ3 373 aa21.77■■□□□ 1.08
CHMP2B-204ENST00000472024 DYDC2Q96IM9 177 aa21.77■■□□□ 1.08
CHMP2B-204ENST00000472024 CDK5RAP3Q96JB5 506 aa21.77■■□□□ 1.08
CHMP2B-204ENST00000472024 MTRQ99707 1265 aa21.77■■□□□ 1.08
CHMP2B-204ENST00000472024 ANP32EQ9BTT0 268 aa21.77■■□□□ 1.08
CHMP2B-204ENST00000472024 PANK2Q9BZ23 570 aa21.77■■□□□ 1.08
CHMP2B-204ENST00000472024 TNMDQ9H2S6 317 aa21.77■■□□□ 1.08
CHMP2B-204ENST00000472024 IGSF9BQ9UPX0 1349 aa21.77■■□□□ 1.07
CHMP2B-204ENST00000472024 GSTTP1A0A1W2PQM5 241 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 PSAPP07602 524 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 XRCC6P12956 609 aaKnown RBP eCLIP21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 CYBAP13498 195 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 CYP2C19P33261 490 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 ADCYAP1R1P41586 468 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 QARSP47897 775 aaKnown RBP21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 MFSD14CQ5VZR4 134 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 MIS18BP1Q6P0N0 1132 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 KCNK18Q7Z418 384 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 C4orf19Q8IY42 314 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 CEP57L1Q8IYX8 460 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 SPATA20Q8TB22 786 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 AFAP1L1Q8TED9 768 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 PAGE5Q96GU1 130 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 ZSWIM4Q9H7M6 989 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 RGL1Q9NZL6 768 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 GNEQ9Y223 722 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms