RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 RAD9AQ99638 391 aa25.83■■□□□ 1.73
C9orf3-213ENST00000471978 TSPYL2Q9H2G4 693 aaPredicted RBP25.83■■□□□ 1.73
C9orf3-213ENST00000471978 JADE2Q9NQC1 790 aa25.83■■□□□ 1.73
C9orf3-213ENST00000471978 MTCH2Q9Y6C9 303 aa25.83■■□□□ 1.73
C9orf3-213ENST00000471978 V9GY48 417 aaPredicted RBP25.83■■□□□ 1.73
C9orf3-213ENST00000471978 KLF18A0A0U1RQI7 1052 aa25.82■■□□□ 1.72
C9orf3-213ENST00000471978 GOLGA8AA7E2F4 631 aa25.82■■□□□ 1.72
C9orf3-213ENST00000471978 GOLGA8BA8MQT2 603 aa25.82■■□□□ 1.72
C9orf3-213ENST00000471978 HMGB1P09429 215 aaKnown RBP25.82■■□□□ 1.72
C9orf3-213ENST00000471978 CTSHP09668 335 aa25.82■■□□□ 1.72
C9orf3-213ENST00000471978 ARHGAP4P98171 946 aa25.82■■□□□ 1.72
C9orf3-213ENST00000471978 SPRED2Q7Z698 418 aa25.82■■□□□ 1.72
C9orf3-213ENST00000471978 LMBR1Q8WVP7 490 aa25.82■■□□□ 1.72
C9orf3-213ENST00000471978 SEPT1Q8WYJ6 367 aa25.82■■□□□ 1.72
C9orf3-213ENST00000471978 GSTTP1A0A1W2PQM5 241 aa25.81■■□□□ 1.72
C9orf3-213ENST00000471978 MAFGO15525 162 aa25.81■■□□□ 1.72
C9orf3-213ENST00000471978 ADAM17P78536 824 aa25.81■■□□□ 1.72
C9orf3-213ENST00000471978 PLEKHG4Q58EX7 1191 aa25.81■■□□□ 1.72
C9orf3-213ENST00000471978 TYW1BQ6NUM6 668 aa25.81■■□□□ 1.72
C9orf3-213ENST00000471978 PPP1R18Q6NYC8 613 aa25.81■■□□□ 1.72
C9orf3-213ENST00000471978 FAM117BQ6P1L5 589 aa25.81■■□□□ 1.72
C9orf3-213ENST00000471978 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.81■■□□□ 1.72
C9orf3-213ENST00000471978 ASB2Q96Q27 587 aa25.81■■□□□ 1.72
C9orf3-213ENST00000471978 RIC8AQ9NPQ8 531 aa25.81■■□□□ 1.72
C9orf3-213ENST00000471978 NAP1L2Q9ULW6 460 aaPredicted RBP25.81■■□□□ 1.72
C9orf3-213ENST00000471978 NRCAMQ92823 1304 aa25.81■■□□□ 1.72
C9orf3-213ENST00000471978 MUC3AQ02505 3323 aa25.81■■□□□ 1.72
C9orf3-213ENST00000471978 MRPS5P82675 430 aaKnown RBP25.8■■□□□ 1.72
C9orf3-213ENST00000471978 FGD1P98174 961 aa25.8■■□□□ 1.72
C9orf3-213ENST00000471978 STXBP3O00186 592 aa25.79■■□□□ 1.72
C9orf3-213ENST00000471978 AMHP03971 560 aa25.79■■□□□ 1.72
C9orf3-213ENST00000471978 ADCY7P51828 1080 aa25.79■■□□□ 1.72
C9orf3-213ENST00000471978 KRT40Q6A162 431 aa25.79■■□□□ 1.72
C9orf3-213ENST00000471978 TEX2Q8IWB9 1127 aa25.79■■□□□ 1.72
C9orf3-213ENST00000471978 SEPT8Q92599 483 aa25.79■■□□□ 1.72
C9orf3-213ENST00000471978 GLG1Q92896 1179 aa25.79■■□□□ 1.72
C9orf3-213ENST00000471978 CCDC136Q96JN2 1154 aa25.79■■□□□ 1.72
C9orf3-213ENST00000471978 PGBD1Q96JS3 809 aa25.79■■□□□ 1.72
C9orf3-213ENST00000471978 MXRA8Q9BRK3 442 aa25.79■■□□□ 1.72
C9orf3-213ENST00000471978 FAM217BQ9NTX9 383 aaPredicted RBP25.79■■□□□ 1.72
C9orf3-213ENST00000471978 ERAP1Q9NZ08 941 aa25.79■■□□□ 1.72
C9orf3-213ENST00000471978 PRRC2BQ5JSZ5 2229 aaKnown RBP25.79■■□□□ 1.72
C9orf3-213ENST00000471978 SMCO2A6NFE2 343 aa25.78■■□□□ 1.72
C9orf3-213ENST00000471978 hCG_1984214I3L0E3 225 aa25.78■■□□□ 1.72
C9orf3-213ENST00000471978 FOSP01100 380 aaPredicted RBP25.78■■□□□ 1.72
C9orf3-213ENST00000471978 CPA1P15085 419 aa25.78■■□□□ 1.72
C9orf3-213ENST00000471978 MARK3P27448 753 aa25.78■■□□□ 1.72
C9orf3-213ENST00000471978 CDC27P30260 824 aa25.78■■□□□ 1.72
C9orf3-213ENST00000471978 RCAN1P53805 252 aa25.78■■□□□ 1.72
C9orf3-213ENST00000471978 GRB10Q13322 594 aa25.78■■□□□ 1.72
C9orf3-213ENST00000471978 MKRN4PQ13434 485 aaPredicted RBP25.78■■□□□ 1.72
C9orf3-213ENST00000471978 SKIV2LQ15477 1246 aaKnown RBP25.78■■□□□ 1.72
C9orf3-213ENST00000471978 MYOCDQ8IZQ8 938 aa25.78■■□□□ 1.72
C9orf3-213ENST00000471978 ZNF713Q8N859 430 aaPredicted RBP25.78■■□□□ 1.72
C9orf3-213ENST00000471978 OSBPL7Q9BZF2 842 aa25.78■■□□□ 1.72
C9orf3-213ENST00000471978 SMARCAD1Q9H4L7 1026 aa25.78■■□□□ 1.72
C9orf3-213ENST00000471978 KCNH7Q9NS40 1196 aa25.78■■□□□ 1.72
C9orf3-213ENST00000471978 BARHL2Q9NY43 387 aa25.78■■□□□ 1.72
C9orf3-213ENST00000471978 PPFIA1Q13136 1202 aa25.77■■□□□ 1.72
C9orf3-213ENST00000471978 CYP2W1Q8TAV3 490 aa25.77■■□□□ 1.72
C9orf3-213ENST00000471978 KCNB2Q92953 911 aa25.77■■□□□ 1.72
C9orf3-213ENST00000471978 JPH1Q9HDC5 661 aaPredicted RBP25.77■■□□□ 1.72
C9orf3-213ENST00000471978 MTUS1Q9ULD2 1270 aa25.77■■□□□ 1.72
C9orf3-213ENST00000471978 INSL6Q9Y581 213 aa25.77■■□□□ 1.72
C9orf3-213ENST00000471978 LINC01553A4QN01 128 aa25.76■■□□□ 1.71
C9orf3-213ENST00000471978 LPXNO60711 386 aa25.76■■□□□ 1.71
C9orf3-213ENST00000471978 METAP2P50579 478 aaKnown RBP eCLIP25.76■■□□□ 1.71
C9orf3-213ENST00000471978 FAM26DQ5JW98 314 aa25.76■■□□□ 1.71
C9orf3-213ENST00000471978 RUFY4Q6ZNE9 571 aa25.76■■□□□ 1.71
C9orf3-213ENST00000471978 Q6ZUG5 572 aa25.76■■□□□ 1.71
C9orf3-213ENST00000471978 JAKMIP1Q96N16 626 aaKnown RBP25.76■■□□□ 1.71
C9orf3-213ENST00000471978 TGS1Q96RS0 853 aaKnown RBP25.76■■□□□ 1.71
C9orf3-213ENST00000471978 ANO3Q9BYT9 981 aa25.76■■□□□ 1.71
C9orf3-213ENST00000471978 GLT8D2Q9H1C3 349 aa25.76■■□□□ 1.71
C9orf3-213ENST00000471978 SLC9A2Q9UBY0 812 aa25.76■■□□□ 1.71
C9orf3-213ENST00000471978 HSPA4P34932 840 aa25.75■■□□□ 1.71
C9orf3-213ENST00000471978 ADD1P35611 737 aaKnown RBP25.75■■□□□ 1.71
C9orf3-213ENST00000471978 ERVK-21P61565 698 aa25.75■■□□□ 1.71
C9orf3-213ENST00000471978 APOBRQ0VD83 1088 aa25.75■■□□□ 1.71
C9orf3-213ENST00000471978 GRIK4Q16099 956 aa25.75■■□□□ 1.71
C9orf3-213ENST00000471978 TAF2Q6P1X5 1199 aa25.75■■□□□ 1.71
C9orf3-213ENST00000471978 IL27Q8NEV9 243 aa25.75■■□□□ 1.71
C9orf3-213ENST00000471978 SDF4Q9BRK5 362 aa25.75■■□□□ 1.71
C9orf3-213ENST00000471978 TMEM260Q9NX78 707 aa25.75■■□□□ 1.71
C9orf3-213ENST00000471978 SNX14Q9Y5W7 946 aa25.75■■□□□ 1.71
C9orf3-213ENST00000471978 MICAL3Q7RTP6 2002 aa25.75■■□□□ 1.71
C9orf3-213ENST00000471978 CCDC196A0A1B0GTZ2 297 aa25.74■■□□□ 1.71
C9orf3-213ENST00000471978 ARP10275 920 aa25.74■■□□□ 1.71
C9orf3-213ENST00000471978 AP3B2Q13367 1082 aa25.74■■□□□ 1.71
C9orf3-213ENST00000471978 CEP55Q53EZ4 464 aa25.74■■□□□ 1.71
C9orf3-213ENST00000471978 BLOC1S2Q6QNY1 142 aa25.74■■□□□ 1.71
C9orf3-213ENST00000471978 RPAINQ86UA6 219 aa25.74■■□□□ 1.71
C9orf3-213ENST00000471978 GDPD5Q8WTR4 605 aa25.74■■□□□ 1.71
C9orf3-213ENST00000471978 BRF1Q92994 677 aa25.74■■□□□ 1.71
C9orf3-213ENST00000471978 TUBE1Q9UJT0 475 aa25.74■■□□□ 1.71
C9orf3-213ENST00000471978 KAT6AQ92794 2004 aa25.74■■□□□ 1.71
C9orf3-213ENST00000471978 NFASCO94856 1347 aa25.73■■□□□ 1.71
C9orf3-213ENST00000471978 CHRNA1P02708 482 aa25.73■■□□□ 1.71
C9orf3-213ENST00000471978 SREBF1P36956 1147 aa25.73■■□□□ 1.71
C9orf3-213ENST00000471978 CLK2P49760 499 aaKnown RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms