RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 ZNF76P36508 570 aa19.24■□□□□ 0.67
RRP1-202ENST00000471909 TUBB4BP68371 445 aa19.24■□□□□ 0.67
RRP1-202ENST00000471909 RASA3Q14644 834 aa19.24■□□□□ 0.67
RRP1-202ENST00000471909 KIF4BQ2VIQ3 1234 aa19.24■□□□□ 0.67
RRP1-202ENST00000471909 ZNF569Q5MCW4 686 aa19.24■□□□□ 0.67
RRP1-202ENST00000471909 MSANTD4Q8NCY6 345 aa19.24■□□□□ 0.67
RRP1-202ENST00000471909 ERMNQ8TAM6 284 aa19.24■□□□□ 0.67
RRP1-202ENST00000471909 SH2D4AQ9H788 454 aa19.24■□□□□ 0.67
RRP1-202ENST00000471909 TBC1D7Q9P0N9 293 aa19.24■□□□□ 0.67
RRP1-202ENST00000471909 VPS18Q9P253 973 aa19.24■□□□□ 0.67
RRP1-202ENST00000471909 MEIS1O00470 390 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 ASNSP08243 561 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 SAMD1Q6SPF0 538 aaPredicted RBP19.23■□□□□ 0.67
RRP1-202ENST00000471909 CCDC65Q8IXS2 484 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 AGPAT5Q9NUQ2 364 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 CTAGE9A4FU28 777 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 PHF20L1A8MW92 1017 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 GCOM1H8Y6P7 765 aaPredicted RBP19.23■□□□□ 0.67
RRP1-202ENST00000471909 NFKBIEO00221 500 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 POLR2MP0CAP2 368 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 ACTN2P35609 894 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 ZCWPW2Q504Y3 356 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 WDR59Q6PJI9 974 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 FAM160B2Q86V87 743 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 TEX2Q8IWB9 1127 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 ERGIC2Q96RQ1 377 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 PNKPQ96T60 521 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 RASSF4Q9H2L5 321 aa19.23■□□□□ 0.67
RRP1-202ENST00000471909 TRIM21P19474 475 aaKnown RBP19.22■□□□□ 0.67
RRP1-202ENST00000471909 FOXR2Q6PJQ5 311 aa19.22■□□□□ 0.67
RRP1-202ENST00000471909 LEKR1Q6ZMV7 388 aa19.22■□□□□ 0.67
RRP1-202ENST00000471909 WDR18Q9BV38 432 aa19.22■□□□□ 0.67
RRP1-202ENST00000471909 FEM1BQ9UK73 627 aa19.22■□□□□ 0.67
RRP1-202ENST00000471909 FGFR1OPO95684 399 aaKnown RBP19.22■□□□□ 0.67
RRP1-202ENST00000471909 VWA3BQ502W6 1294 aa19.22■□□□□ 0.67
RRP1-202ENST00000471909 HERC4Q5GLZ8 1057 aaPredicted RBP19.22■□□□□ 0.67
RRP1-202ENST00000471909 RETREG2Q8NC44 543 aa19.22■□□□□ 0.67
RRP1-202ENST00000471909 NUP58Q9BVL2 599 aa19.22■□□□□ 0.67
RRP1-202ENST00000471909 FRMD3A2A2Y4 597 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 EML1O00423 815 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 PABPC4Q13310 644 aaKnown RBP eCLIP19.21■□□□□ 0.676e-8■■■■□ 19.8
RRP1-202ENST00000471909 FKBP15Q5T1M5 1219 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 MSL3Q8N5Y2 521 aaKnown RBP19.21■□□□□ 0.67
RRP1-202ENST00000471909 TEPSINQ96N21 525 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 TSG101Q99816 390 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 SLF1Q9BQI6 1058 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 NDST4Q9H3R1 872 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 DNM3Q9UQ16 869 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 MRPL11Q9Y3B7 192 aaKnown RBP19.21■□□□□ 0.67
RRP1-202ENST00000471909 MYO1CO00159 1063 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 ABL1P00519 1130 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 ZNF280AP59817 542 aaPredicted RBP19.21■□□□□ 0.67
RRP1-202ENST00000471909 CYP4A11Q02928 519 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 TNIP1Q15025 636 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 LDHDQ86WU2 507 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 ZNF341Q9BYN7 854 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 ABCB6Q9NP58 842 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 ABCB11O95342 1321 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 PITPNM2Q9BZ72 1349 aa19.21■□□□□ 0.67
RRP1-202ENST00000471909 UBXN2AP68543 259 aa19.2■□□□□ 0.66
RRP1-202ENST00000471909 MAN2A1Q16706 1144 aa19.2■□□□□ 0.66
RRP1-202ENST00000471909 SLC30A10Q6XR72 485 aa19.2■□□□□ 0.66
RRP1-202ENST00000471909 SYT2Q8N9I0 419 aaPredicted RBP19.2■□□□□ 0.66
RRP1-202ENST00000471909 PCMTD1Q96MG8 357 aaPredicted RBP19.2■□□□□ 0.66
RRP1-202ENST00000471909 L1RE1Q9UN81 338 aa19.2■□□□□ 0.66
RRP1-202ENST00000471909 EPN1Q9Y6I3 576 aaPredicted RBP19.2■□□□□ 0.66
RRP1-202ENST00000471909 NDUFA10O95299 355 aa19.2■□□□□ 0.66
RRP1-202ENST00000471909 KRT18P05783 430 aaKnown RBP19.2■□□□□ 0.66
RRP1-202ENST00000471909 ERCC3P19447 782 aa19.2■□□□□ 0.66
RRP1-202ENST00000471909 INPP5BP32019 993 aa19.2■□□□□ 0.66
RRP1-202ENST00000471909 PTGER2P43116 358 aa19.2■□□□□ 0.66
RRP1-202ENST00000471909 MAPK8IP2Q13387 824 aaPredicted RBP19.2■□□□□ 0.66
RRP1-202ENST00000471909 GIT2Q14161 759 aa19.2■□□□□ 0.66
RRP1-202ENST00000471909 MEA1Q16626 185 aa19.2■□□□□ 0.66
RRP1-202ENST00000471909 SLC35F6Q8N357 371 aa19.2■□□□□ 0.66
RRP1-202ENST00000471909 SCFD1Q8WVM8 642 aa19.2■□□□□ 0.66
RRP1-202ENST00000471909 EIF2AK1Q9BQI3 630 aaKnown RBP19.2■□□□□ 0.66
RRP1-202ENST00000471909 GBP3Q9H0R5 595 aa19.2■□□□□ 0.66
RRP1-202ENST00000471909 PPP1R1BQ9UD71 204 aaPredicted RBP19.2■□□□□ 0.66
RRP1-202ENST00000471909 REXO2Q9Y3B8 237 aaKnown RBP19.2■□□□□ 0.66
RRP1-202ENST00000471909 STK24Q9Y6E0 443 aa19.2■□□□□ 0.66
RRP1-202ENST00000471909 RHOXF2BP0C7M4 288 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 ZBED6P86452 979 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 FKBP3Q00688 224 aaKnown RBP19.19■□□□□ 0.66
RRP1-202ENST00000471909 TSR1Q2NL82 804 aaKnown RBP19.19■□□□□ 0.66
RRP1-202ENST00000471909 FIGNQ5HY92 759 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 NELFCDQ8IXH7 590 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 RHOXF2Q9BQY4 288 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 RGL1Q9NZL6 768 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 LCMT1Q9UIC8 334 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 SIK3Q9Y2K2 1263 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 UTRNP46939 3433 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 CTAGE15A4D2H0 777 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 IVLP07476 585 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 CTAGE8P0CG41 777 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 ARHGAP25P42331 645 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 OTOP1Q7RTM1 612 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 CTAGE6Q86UF2 777 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 CTAGE4Q8IX94 777 aa19.19■□□□□ 0.66
RRP1-202ENST00000471909 C10orf67Q8IYJ2 551 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms