RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ERC2O15083 957 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 KDM1AO60341 852 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 NPHS1O60500 1241 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 LTKP29376 864 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 CEBPAP49715 358 aaPredicted RBP8.51□□□□□ -1.05
SMC5-202ENST00000471372 COBLL1Q53SF7 1204 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 CPZQ66K79 652 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 TEX2Q8IWB9 1127 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 RUNDC1Q96C34 613 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 MFSD14AQ96MC6 490 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 PCIF1Q9H4Z3 704 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 C7orf69Q9H7B7 122 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 GULP1Q9UBP9 304 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 TAGLN3Q9UI15 199 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 FAM50BQ9Y247 325 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 ZNF281Q9Y2X9 895 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 SCDO00767 359 aa8.5□□□□□ -1.05
SMC5-202ENST00000471372 PPP1R11O60927 126 aaPredicted RBP8.5□□□□□ -1.05
SMC5-202ENST00000471372 TEKQ02763 1124 aa8.5□□□□□ -1.05
SMC5-202ENST00000471372 PICALMQ13492 652 aa8.5□□□□□ -1.05
SMC5-202ENST00000471372 LONRF3Q496Y0 759 aa8.5□□□□□ -1.05
SMC5-202ENST00000471372 RRP12Q5JTH9 1297 aaKnown RBP8.5□□□□□ -1.05
SMC5-202ENST00000471372 HABP4Q5JVS0 413 aaKnown RBP8.5□□□□□ -1.05
SMC5-202ENST00000471372 GPR158Q5T848 1215 aa8.5□□□□□ -1.05
SMC5-202ENST00000471372 ESRP1Q6NXG1 681 aaKnown RBP8.5□□□□□ -1.05
SMC5-202ENST00000471372 B3GNT9Q6UX72 402 aa8.5□□□□□ -1.05
SMC5-202ENST00000471372 JADE3Q92613 823 aa8.5□□□□□ -1.05
SMC5-202ENST00000471372 MARCH2Q9P0N8 246 aa8.5□□□□□ -1.05
SMC5-202ENST00000471372 ADGRE2Q9UHX3 823 aa8.5□□□□□ -1.05
SMC5-202ENST00000471372 VCAM1P19320 739 aa8.49□□□□□ -1.05
SMC5-202ENST00000471372 RPL10P27635 214 aaKnown RBP8.49□□□□□ -1.05
SMC5-202ENST00000471372 RBM10P98175 930 aaKnown RBP8.49□□□□□ -1.05
SMC5-202ENST00000471372 SPIRE1Q08AE8 756 aa8.49□□□□□ -1.05
SMC5-202ENST00000471372 IFI16Q16666 785 aaKnown RBP8.49□□□□□ -1.05
SMC5-202ENST00000471372 XP32Q5T750 250 aa8.49□□□□□ -1.05
SMC5-202ENST00000471372 IFIT1BQ5T764 474 aaKnown RBP8.49□□□□□ -1.05
SMC5-202ENST00000471372 CYB5RLQ6IPT4 315 aa8.49□□□□□ -1.05
SMC5-202ENST00000471372 ARHGAP27Q6ZUM4 889 aa8.49□□□□□ -1.05
SMC5-202ENST00000471372 OTOP3Q7RTS5 596 aa8.49□□□□□ -1.05
SMC5-202ENST00000471372 WAPLQ7Z5K2 1190 aa8.49□□□□□ -1.05
SMC5-202ENST00000471372 APBB1IPQ7Z5R6 666 aaPredicted RBP8.49□□□□□ -1.05
SMC5-202ENST00000471372 Q8N1Y9 231 aa8.49□□□□□ -1.05
SMC5-202ENST00000471372 PIP4K2CQ8TBX8 421 aa8.49□□□□□ -1.05
SMC5-202ENST00000471372 TRMT2BQ96GJ1 504 aaKnown RBP8.49□□□□□ -1.05
SMC5-202ENST00000471372 SP110Q9HB58 689 aa8.49□□□□□ -1.05
SMC5-202ENST00000471372 NMRK2Q9NPI5 230 aa8.49□□□□□ -1.05
SMC5-202ENST00000471372 SEMA3GQ9NS98 782 aa8.49□□□□□ -1.05
SMC5-202ENST00000471372 PLAGL2Q9UPG8 496 aa8.49□□□□□ -1.05
SMC5-202ENST00000471372 AP1G1O43747 822 aa8.48□□□□□ -1.05
SMC5-202ENST00000471372 HIP1RO75146 1068 aa8.48□□□□□ -1.05
SMC5-202ENST00000471372 F13BP05160 661 aa8.48□□□□□ -1.05
SMC5-202ENST00000471372 HSPA6P17066 643 aa8.48□□□□□ -1.05
SMC5-202ENST00000471372 ENDOUP21128 410 aaKnown RBP8.48□□□□□ -1.05
SMC5-202ENST00000471372 ZNF267Q14586 743 aaPredicted RBP8.48□□□□□ -1.05
SMC5-202ENST00000471372 THAP5Q7Z6K1 395 aa8.48□□□□□ -1.05
SMC5-202ENST00000471372 CREG2Q8IUH2 290 aa8.48□□□□□ -1.05
SMC5-202ENST00000471372 SPICE1Q8N0Z3 855 aa8.48□□□□□ -1.05
SMC5-202ENST00000471372 SLC35G2Q8TBE7 412 aa8.48□□□□□ -1.05
SMC5-202ENST00000471372 SSBP4Q9BWG4 385 aaPredicted RBP8.48□□□□□ -1.05
SMC5-202ENST00000471372 CD244Q9BZW8 370 aa8.48□□□□□ -1.05
SMC5-202ENST00000471372 PRDM16Q9HAZ2 1276 aa8.48□□□□□ -1.05
SMC5-202ENST00000471372 MAN1C1Q9NR34 630 aa8.48□□□□□ -1.05
SMC5-202ENST00000471372 INTUQ9ULD6 942 aa8.48□□□□□ -1.05
SMC5-202ENST00000471372 SRPK3Q9UPE1 567 aa8.48□□□□□ -1.05
SMC5-202ENST00000471372 C22orf46C9J442 243 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 ESR1P03372 595 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 CEACAM5P06731 702 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 MYBP10242 640 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 CYP27A1Q02318 531 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 EGR3Q06889 387 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 MORC3Q14149 939 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 SAFBQ15424 915 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMC5-202ENST00000471372 SEC23AQ15436 765 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 TTLL7Q6ZT98 887 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 FRMD7Q6ZUT3 714 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 RTF1Q92541 710 aaKnown RBP8.47□□□□□ -1.05
SMC5-202ENST00000471372 E2F7Q96AV8 911 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 FCRL2Q96LA5 508 aaPredicted RBP8.47□□□□□ -1.05
SMC5-202ENST00000471372 TAAR9Q96RI9 348 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 ORAI2Q96SN7 254 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 EPB41L1Q9H4G0 881 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 DNAJC28Q9NX36 388 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 DAAM1Q9Y4D1 1078 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 B3GALT1Q9Y5Z6 326 aa8.47□□□□□ -1.05
SMC5-202ENST00000471372 ANO9A1A5B4 782 aa8.46□□□□□ -1.06
SMC5-202ENST00000471372 TMEM253P0C7T8 217 aa8.46□□□□□ -1.06
SMC5-202ENST00000471372 PAX3P23760 479 aa8.46□□□□□ -1.06
SMC5-202ENST00000471372 CLCN7P51798 805 aa8.46□□□□□ -1.06
SMC5-202ENST00000471372 SRSF2Q01130 221 aaKnown RBP8.46□□□□□ -1.06
SMC5-202ENST00000471372 DUSP27Q5VZP5 1158 aa8.46□□□□□ -1.06
SMC5-202ENST00000471372 HLA-DQA1Q5Y7H0 255 aa8.46□□□□□ -1.06
SMC5-202ENST00000471372 DLG3Q92796 817 aa8.46□□□□□ -1.06
SMC5-202ENST00000471372 ZNF496Q96IT1 587 aaPredicted RBP8.46□□□□□ -1.06
SMC5-202ENST00000471372 STRBPQ96SI9 672 aaKnown RBP8.46□□□□□ -1.06
SMC5-202ENST00000471372 ACSS2Q9NR19 701 aa8.46□□□□□ -1.06
SMC5-202ENST00000471372 DDX21Q9NR30 783 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMC5-202ENST00000471372 STOML1Q9UBI4 398 aa8.46□□□□□ -1.06
SMC5-202ENST00000471372 MSRAQ9UJ68 235 aa8.46□□□□□ -1.06
SMC5-202ENST00000471372 DNM3Q9UQ16 869 aa8.46□□□□□ -1.06
SMC5-202ENST00000471372 RAXQ9Y2V3 346 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms