RNA–Protein interactions for RNA: ENST00000471308.5

PCBP4-208, Transcript of poly(rC) binding protein 4, human

TSL 2

Gene PCBP4, Length 2,087 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCBP4-208	ENST00000471308	POLR3C	Q9BUI4	534 aa	Predicted RBP	18.7	■□□□□ 0.58
PCBP4-208	ENST00000471308	TFR2	Q9UP52	801 aa		18.7	■□□□□ 0.58
PCBP4-208	ENST00000471308	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	18.7	■□□□□ 0.58
PCBP4-208	ENST00000471308	NPHP3-ACAD11	A0A0J9YXS1	232 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308		A0A1W2PRG0	241 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	SPDYE2B	A6NHP3	402 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	MSH4	O15457	936 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	SPDYE6	P0CI01	402 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	SPATA31C1	P0DKV0	1188 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	MCM3	P25205	808 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	JAG1	P78504	1218 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	KCNMA1	Q12791	1236 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	IQCE	Q6IPM2	695 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	MSL3	Q8N5Y2	521 aa	Known RBP	18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	VAV3	Q9UKW4	847 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	CETN3	O15182	167 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	RHOXF2B	P0C7M4	288 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	ZNF76	P36508	570 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	CACNB1	Q02641	598 aa	Predicted RBP	18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	GIT2	Q14161	759 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	WDR93	Q6P2C0	686 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	UIMC1	Q96RL1	719 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	RHOXF2	Q9BQY4	288 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	HDAC6	Q9UBN7	1215 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	HDAC9	Q9UKV0	1011 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	TRAF3IP3	Q9Y228	551 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	TMX2	Q9Y320	296 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	JRKL	Q9Y4A0	524 aa		18.69	■□□□□ 0.58
PCBP4-208	ENST00000471308	MACROD2	A1Z1Q3	448 aa		18.68	■□□□□ 0.58
PCBP4-208	ENST00000471308	MAP2K7	O14733	419 aa		18.68	■□□□□ 0.58
PCBP4-208	ENST00000471308	PJA2	O43164	708 aa		18.68	■□□□□ 0.58
PCBP4-208	ENST00000471308	TFRC	P02786	760 aa	Known RBP	18.68	■□□□□ 0.58
PCBP4-208	ENST00000471308	ADAM9	Q13443	819 aa		18.68	■□□□□ 0.58
PCBP4-208	ENST00000471308	RRP1B	Q14684	758 aa	Known RBP	18.68	■□□□□ 0.58
PCBP4-208	ENST00000471308	BEND6	Q5SZJ8	279 aa	Predicted RBP	18.68	■□□□□ 0.58
PCBP4-208	ENST00000471308	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.68	■□□□□ 0.58
PCBP4-208	ENST00000471308	KRT26	Q7Z3Y9	468 aa		18.68	■□□□□ 0.58
PCBP4-208	ENST00000471308	NOA1	Q8NC60	698 aa	Known RBP	18.68	■□□□□ 0.58
PCBP4-208	ENST00000471308	SMCR8	Q8TEV9	937 aa	Predicted RBP	18.68	■□□□□ 0.58
PCBP4-208	ENST00000471308	FAM151A	Q8WW52	585 aa		18.68	■□□□□ 0.58
PCBP4-208	ENST00000471308	ALS2CR12	Q96Q35	445 aa		18.68	■□□□□ 0.58
PCBP4-208	ENST00000471308	LOXHD1	Q8IVV2	1947 aa		18.68	■□□□□ 0.58
PCBP4-208	ENST00000471308	EPS15	P42566	896 aa		18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	PABPC4	Q13310	644 aa	Known RBP eCLIP	18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	SLC9C1	Q4G0N8	1177 aa		18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	HDX	Q7Z353	690 aa		18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	REEP2	Q9BRK0	252 aa		18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	ZHX3	Q9H4I2	956 aa		18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	EHMT1	Q9H9B1	1298 aa		18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	LUC7L	Q9NQ29	371 aa	Known RBP	18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	RBBP6	Q7Z6E9	1792 aa	Known RBP	18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	RBAK-RBAKDN	I3L0D1	243 aa		18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	HOXA13	P31271	388 aa	Predicted RBP	18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	RAD51AP2	Q09MP3	1159 aa		18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	GPS2	Q13227	327 aa		18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	SMC1A	Q14683	1233 aa	Known RBP	18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	SLC15A2	Q16348	729 aa		18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	ASTE1	Q2TB18	679 aa	Predicted RBP	18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	FAM83B	Q5T0W9	1011 aa		18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	SFMBT2	Q5VUG0	894 aa		18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	EPM2AIP1	Q7L775	607 aa	Predicted RBP	18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	SPICE1	Q8N0Z3	855 aa		18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	LSM14B	Q9BX40	385 aa	Known RBP	18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	ST7	Q9NRC1	585 aa		18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	DUSP10	Q9Y6W6	482 aa		18.67	■□□□□ 0.58
PCBP4-208	ENST00000471308	IGLV3-22	A0A075B6J6	115 aa		18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	TCP10L2	B9ZVM9	353 aa		18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	CALU	O43852	315 aa	Predicted RBP	18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	EYA4	O95677	639 aa		18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	SERPING1	P05155	500 aa		18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	PRLR	P16471	622 aa		18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	NR2F2	P24468	414 aa		18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	PSMC6	P62333	389 aa		18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	KNOP1	Q1ED39	458 aa	Known RBP	18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	BMT2	Q1RMZ1	405 aa		18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	TDRD12	Q587J7	1177 aa	Known RBP	18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	HGSNAT	Q68CP4	663 aa		18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	ZNF771	Q7L3S4	317 aa	Predicted RBP	18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	FRMD5	Q7Z6J6	570 aa		18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	SFR1	Q86XK3	245 aa		18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	CHURC1	Q8WUH1	139 aa		18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	TUFT1	Q9NNX1	390 aa		18.66	■□□□□ 0.58
PCBP4-208	ENST00000471308	TARSL2	A2RTX5	802 aa	Known RBP	18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	PDXK	O00764	312 aa		18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	PLA2G6	O60733	806 aa		18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	TBCA	O75347	108 aa	Known RBP	18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	NOL4	O94818	638 aa		18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	ERCC3	P19447	782 aa		18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	ECE1	P42892	770 aa		18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	MAGEA1	P43355	309 aa		18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	USP14	P54578	494 aa		18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	VSNL1	P62760	191 aa		18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	DLGAP5	Q15398	846 aa		18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	RTKN2	Q8IZC4	609 aa		18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	CCDC155	Q8N6L0	562 aa		18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	MMS19	Q96T76	1030 aa		18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	PSMD1	Q99460	953 aa		18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	EIF2AK1	Q9BQI3	630 aa	Known RBP	18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	JADE2	Q9NQC1	790 aa		18.65	■□□□□ 0.58
PCBP4-208	ENST00000471308	ZNF70	Q9UC06	446 aa	Predicted RBP	18.65	■□□□□ 0.58

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