RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 OSBPL2Q9H1P3 480 aa8.46□□□□□ -1.06
CCDC39-202ENST00000471307 L2HGDHQ9H9P8 463 aa8.46□□□□□ -1.06
CCDC39-202ENST00000471307 WASF3Q9UPY6 502 aa8.46□□□□□ -1.06
CCDC39-202ENST00000471307 PCDHA8Q9Y5H6 950 aa8.46□□□□□ -1.06
CCDC39-202ENST00000471307 PRICKLE3O43900 615 aaPredicted RBP8.45□□□□□ -1.06
CCDC39-202ENST00000471307 ENO2P09104 434 aaPredicted RBP8.45□□□□□ -1.06
CCDC39-202ENST00000471307 CNR2P34972 360 aa8.45□□□□□ -1.06
CCDC39-202ENST00000471307 NFE2L2Q16236 605 aa8.45□□□□□ -1.06
CCDC39-202ENST00000471307 TRIM61Q5EBN2 209 aa8.45□□□□□ -1.06
CCDC39-202ENST00000471307 TMC5Q6UXY8 1006 aa8.45□□□□□ -1.06
CCDC39-202ENST00000471307 ZSWIM3Q96MP5 696 aa8.45□□□□□ -1.06
CCDC39-202ENST00000471307 YTHDC1Q96MU7 727 aaKnown RBP8.45□□□□□ -1.06
CCDC39-202ENST00000471307 SRPK3Q9UPE1 567 aa8.45□□□□□ -1.06
CCDC39-202ENST00000471307 TELO2Q9Y4R8 837 aa8.45□□□□□ -1.06
CCDC39-202ENST00000471307 IL13P35225 146 aa8.44□□□□□ -1.06
CCDC39-202ENST00000471307 C2orf27AQ580R0 203 aa8.44□□□□□ -1.06
CCDC39-202ENST00000471307 FAM47CQ5HY64 1035 aa8.44□□□□□ -1.06
CCDC39-202ENST00000471307 CD276Q5ZPR3 534 aa8.44□□□□□ -1.06
CCDC39-202ENST00000471307 GSTCDQ8NEC7 633 aa8.44□□□□□ -1.06
CCDC39-202ENST00000471307 SH3RF2Q8TEC5 729 aa8.44□□□□□ -1.06
CCDC39-202ENST00000471307 TMEM168Q9H0V1 697 aa8.44□□□□□ -1.06
CCDC39-202ENST00000471307 CROTQ9UKG9 612 aa8.44□□□□□ -1.06
CCDC39-202ENST00000471307 DUSP10Q9Y6W6 482 aa8.44□□□□□ -1.06
CCDC39-202ENST00000471307 LTFP02788 710 aa8.43□□□□□ -1.06
CCDC39-202ENST00000471307 CYP1A1P04798 512 aaPredicted RBP8.43□□□□□ -1.06
CCDC39-202ENST00000471307 GJA4P35212 333 aa8.43□□□□□ -1.06
CCDC39-202ENST00000471307 MLLT6P55198 1093 aaPredicted RBP8.43□□□□□ -1.06
CCDC39-202ENST00000471307 ST5P78524 1137 aa8.43□□□□□ -1.06
CCDC39-202ENST00000471307 SKOR2Q2VWA4 1001 aaPredicted RBP8.43□□□□□ -1.06
CCDC39-202ENST00000471307 FIGNQ5HY92 759 aa8.43□□□□□ -1.06
CCDC39-202ENST00000471307 ARHGAP36Q6ZRI8 547 aa8.43□□□□□ -1.06
CCDC39-202ENST00000471307 RBM12BQ8IXT5 1001 aaKnown RBP8.43□□□□□ -1.06
CCDC39-202ENST00000471307 DDX1Q92499 740 aaKnown RBP8.43□□□□□ -1.06
CCDC39-202ENST00000471307 BDH2Q9BUT1 245 aa8.43□□□□□ -1.06
CCDC39-202ENST00000471307 MRPL4Q9BYD3 311 aaKnown RBP8.43□□□□□ -1.06
CCDC39-202ENST00000471307 FTSJ1Q9UET6 329 aa8.43□□□□□ -1.06
CCDC39-202ENST00000471307 TCRBV5S4A2TA0A5A2 114 aa8.42□□□□□ -1.06
CCDC39-202ENST00000471307 KCNQ2O43526 872 aa8.42□□□□□ -1.06
CCDC39-202ENST00000471307 CRTAMO95727 393 aa8.42□□□□□ -1.06
CCDC39-202ENST00000471307 PLP2Q04941 152 aa8.42□□□□□ -1.06
CCDC39-202ENST00000471307 SURF1Q15526 300 aa8.42□□□□□ -1.06
CCDC39-202ENST00000471307 CRY1Q16526 586 aa8.42□□□□□ -1.06
CCDC39-202ENST00000471307 PLEKHH3Q7Z736 793 aa8.42□□□□□ -1.06
CCDC39-202ENST00000471307 FERMT3Q86UX7 667 aa8.42□□□□□ -1.06
CCDC39-202ENST00000471307 ZC3H7AQ8IWR0 971 aaKnown RBP8.42□□□□□ -1.06
CCDC39-202ENST00000471307 ZCCHC14Q8WYQ9 949 aaKnown RBP8.42□□□□□ -1.06
CCDC39-202ENST00000471307 KRTAP4-9Q9BYQ8 210 aa8.42□□□□□ -1.06
CCDC39-202ENST00000471307 SLC52A2Q9HAB3 445 aa8.42□□□□□ -1.06
CCDC39-202ENST00000471307 CATSPERZQ9NTU4 200 aa8.42□□□□□ -1.06
CCDC39-202ENST00000471307 PYGMP11217 842 aa8.41□□□□□ -1.06
CCDC39-202ENST00000471307 PDE6AP16499 860 aa8.41□□□□□ -1.06
CCDC39-202ENST00000471307 BUD31P41223 144 aaPredicted RBP8.41□□□□□ -1.06
CCDC39-202ENST00000471307 SMAD2Q15796 467 aaKnown RBP8.41□□□□□ -1.06
CCDC39-202ENST00000471307 SKIDA1Q1XH10 827 aa8.41□□□□□ -1.06
CCDC39-202ENST00000471307 DNAJC2Q99543 621 aaKnown RBP8.41□□□□□ -1.06
CCDC39-202ENST00000471307 CD244Q9BZW8 370 aa8.41□□□□□ -1.06
CCDC39-202ENST00000471307 RBPJLQ9UBG7 517 aa8.41□□□□□ -1.06
CCDC39-202ENST00000471307 SFMBT1Q9UHJ3 866 aa8.41□□□□□ -1.06
CCDC39-202ENST00000471307 PCDHA9Q9Y5H5 950 aa8.41□□□□□ -1.06
CCDC39-202ENST00000471307 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.4□□□□□ -1.06
CCDC39-202ENST00000471307 ZNF839A8K0R7 811 aa8.4□□□□□ -1.06
CCDC39-202ENST00000471307 ZNF561-AS1K7EIQ3 104 aa8.4□□□□□ -1.06
CCDC39-202ENST00000471307 ACOT7O00154 380 aa8.4□□□□□ -1.06
CCDC39-202ENST00000471307 PLATP00750 562 aa8.4□□□□□ -1.06
CCDC39-202ENST00000471307 CKMP06732 381 aa8.4□□□□□ -1.06
CCDC39-202ENST00000471307 PTPN1P18031 435 aaKnown RBP8.4□□□□□ -1.06
CCDC39-202ENST00000471307 LACTBP83111 547 aaPredicted RBP8.4□□□□□ -1.06
CCDC39-202ENST00000471307 PFKPQ01813 784 aa8.4□□□□□ -1.06
CCDC39-202ENST00000471307 PKN3Q6P5Z2 889 aa8.4□□□□□ -1.06
CCDC39-202ENST00000471307 TRMT10BQ6PF06 316 aaKnown RBP8.4□□□□□ -1.06
CCDC39-202ENST00000471307 EP400NLQ6ZTU2 488 aa8.4□□□□□ -1.06
CCDC39-202ENST00000471307 KLHL36Q8N4N3 616 aa8.4□□□□□ -1.06
CCDC39-202ENST00000471307 IGDCC4Q8TDY8 1250 aa8.4□□□□□ -1.06
CCDC39-202ENST00000471307 MAGEB10Q96LZ2 347 aaPredicted RBP8.4□□□□□ -1.06
CCDC39-202ENST00000471307 BARX1Q9HBU1 254 aaPredicted RBP8.4□□□□□ -1.06
CCDC39-202ENST00000471307 ARHGAP20Q9P2F6 1191 aa8.4□□□□□ -1.06
CCDC39-202ENST00000471307 NDOR1Q9UHB4 597 aa8.4□□□□□ -1.06
CCDC39-202ENST00000471307 CDK11AQ9UQ88 783 aaPredicted RBP8.4□□□□□ -1.06
CCDC39-202ENST00000471307 ATP23Q9Y6H3 246 aa8.4□□□□□ -1.06
CCDC39-202ENST00000471307 CCDC66A2RUB6 948 aa8.39□□□□□ -1.07
CCDC39-202ENST00000471307 FBXO21O94952 628 aa8.39□□□□□ -1.07
CCDC39-202ENST00000471307 AMY2AP04746 511 aa8.39□□□□□ -1.07
CCDC39-202ENST00000471307 SRGAP2CP0DJJ0 459 aa8.39□□□□□ -1.07
CCDC39-202ENST00000471307 COL6A1P12109 1028 aa8.39□□□□□ -1.07
CCDC39-202ENST00000471307 AMY2BP19961 511 aa8.39□□□□□ -1.07
CCDC39-202ENST00000471307 DBPQ10586 325 aaPredicted RBP8.39□□□□□ -1.07
CCDC39-202ENST00000471307 EFEMP1Q12805 493 aa8.39□□□□□ -1.07
CCDC39-202ENST00000471307 BTBD8Q5XKL5 378 aa8.39□□□□□ -1.07
CCDC39-202ENST00000471307 UBXN4Q92575 508 aa8.39□□□□□ -1.07
CCDC39-202ENST00000471307 MBD6Q96DN6 1003 aa8.39□□□□□ -1.07
CCDC39-202ENST00000471307 DRC1Q96MC2 740 aa8.39□□□□□ -1.07
CCDC39-202ENST00000471307 CELF4Q9BZC1 486 aaKnown RBP8.39□□□□□ -1.07
CCDC39-202ENST00000471307 CBLCQ9ULV8 474 aa8.39□□□□□ -1.07
CCDC39-202ENST00000471307 INVSQ9Y283 1065 aa8.39□□□□□ -1.07
CCDC39-202ENST00000471307 PTCH2Q9Y6C5 1203 aa8.39□□□□□ -1.07
CCDC39-202ENST00000471307 K7ESM1 405 aa8.38□□□□□ -1.07
CCDC39-202ENST00000471307 MAN2B1O00754 1011 aa8.38□□□□□ -1.07
CCDC39-202ENST00000471307 CLASP2O75122 1294 aaKnown RBP8.38□□□□□ -1.07
CCDC39-202ENST00000471307 NPTXRO95502 500 aa8.38□□□□□ -1.07
CCDC39-202ENST00000471307 ITGB3P05106 788 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms