RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 CPNE8Q86YQ8 564 aa7.57□□□□□ -1.2
CKS1B-204ENST00000471245 Q8N1Y9 231 aa7.57□□□□□ -1.2
CKS1B-204ENST00000471245 CHST14Q8NCH0 376 aa7.57□□□□□ -1.2
CKS1B-204ENST00000471245 AGBL5Q8NDL9 886 aa7.57□□□□□ -1.2
CKS1B-204ENST00000471245 FBXW5Q969U6 566 aa7.57□□□□□ -1.2
CKS1B-204ENST00000471245 COQ6Q9Y2Z9 468 aa7.57□□□□□ -1.2
CKS1B-204ENST00000471245 PIK3C2BO00750 1634 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 COL16A1Q07092 1604 aaPredicted RBP7.56□□□□□ -1.2
CKS1B-204ENST00000471245 MROH1Q8NDA8 1641 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 EIF2AK4Q9P2K8 1649 aaKnown RBP7.56□□□□□ -1.2
CKS1B-204ENST00000471245 CCDC66A2RUB6 948 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 NEMP1O14524 444 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 NPHS1O60500 1241 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 GAS7O60861 476 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 ADAMTS4O75173 837 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 RPL10P27635 214 aaKnown RBP7.56□□□□□ -1.2
CKS1B-204ENST00000471245 SART3Q15020 963 aaKnown RBP7.56□□□□□ -1.2
CKS1B-204ENST00000471245 CCDC181Q5TID7 509 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 ZPBP2Q6X784 338 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 OVCH1Q7RTY7 1134 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 SMC1BQ8NDV3 1235 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 PUS7LQ9H0K6 701 aaKnown RBP7.56□□□□□ -1.2
CKS1B-204ENST00000471245 CDIP1Q9H305 208 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 IPPKQ9H8X2 491 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 SLC5A4Q9NY91 659 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 TNFRSF10DQ9UBN6 386 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 B4GALT6Q9UBX8 382 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 ADGRE2Q9UHX3 823 aa7.56□□□□□ -1.2
CKS1B-204ENST00000471245 ZNF891A8MT65 544 aaPredicted RBP7.55□□□□□ -1.2
CKS1B-204ENST00000471245 H7BY64 318 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 TRAF5O00463 557 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 SRGAP2CP0DJJ0 459 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 LSSP48449 732 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 ST5P78524 1137 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 OCRLQ01968 901 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 LHFPL2Q6ZUX7 228 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 C16orf59Q7L2K0 433 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 SPRED2Q7Z698 418 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 WFDC3Q8IUB2 231 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 TMEM52Q8NDY8 209 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 SYTL4Q96C24 671 aaPredicted RBP7.55□□□□□ -1.2
CKS1B-204ENST00000471245 MAP6Q96JE9 813 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 ASPSCR1Q9BZE9 553 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 PAK6Q9NQU5 681 aaPredicted RBP7.55□□□□□ -1.2
CKS1B-204ENST00000471245 CHPF2Q9P2E5 772 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 FBXL7Q9UJT9 491 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 G3BP2Q9UN86 482 aaKnown RBP7.55□□□□□ -1.2
CKS1B-204ENST00000471245 ZKSCAN5Q9Y2L8 839 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 THRAP3Q9Y2W1 955 aaKnown RBP7.55□□□□□ -1.2
CKS1B-204ENST00000471245 EHBP1L1Q8N3D4 1523 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 CAMSAP2Q08AD1 1489 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 LRRC9Q6ZRR7 1453 aa7.55□□□□□ -1.2
CKS1B-204ENST00000471245 ARHGEF5Q12774 1597 aa7.54□□□□□ -1.2
CKS1B-204ENST00000471245 KDM5AP29375 1690 aaKnown RBP7.54□□□□□ -1.2
CKS1B-204ENST00000471245 SHPRHQ149N8 1683 aa7.54□□□□□ -1.2
CKS1B-204ENST00000471245 LRP6O75581 1613 aa7.54□□□□□ -1.2
CKS1B-204ENST00000471245 ALDH1L1O75891 902 aa7.54□□□□□ -1.2
CKS1B-204ENST00000471245 EPHB1P54762 984 aa7.54□□□□□ -1.2
CKS1B-204ENST00000471245 CORO7P57737 925 aa7.54□□□□□ -1.2
CKS1B-204ENST00000471245 BNIP3Q12983 259 aa7.54□□□□□ -1.2
CKS1B-204ENST00000471245 DUSP4Q13115 394 aa7.54□□□□□ -1.2
CKS1B-204ENST00000471245 SKOR2Q2VWA4 1001 aaPredicted RBP7.54□□□□□ -1.2
CKS1B-204ENST00000471245 NLRP10Q86W26 655 aa7.54□□□□□ -1.2
CKS1B-204ENST00000471245 G6PC3Q9BUM1 346 aa7.54□□□□□ -1.2
CKS1B-204ENST00000471245 CRTAC1Q9NQ79 661 aa7.54□□□□□ -1.2
CKS1B-204ENST00000471245 PPARGC1AQ9UBK2 798 aaKnown RBP7.54□□□□□ -1.2
CKS1B-204ENST00000471245 TMEM94Q12767 1356 aa7.54□□□□□ -1.2
CKS1B-204ENST00000471245 MTUS2Q5JR59 1369 aa7.54□□□□□ -1.2
CKS1B-204ENST00000471245 NWD1Q149M9 1564 aa7.54□□□□□ -1.2
CKS1B-204ENST00000471245 SRCAPQ6ZRS2 3230 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 KATNA1O75449 491 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 CD8BP10966 210 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 PYGMP11217 842 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 FUT4P22083 530 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 BCL6P41182 706 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 ADCYAP1R1P41586 468 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 KIR2DL1P43626 348 aaPredicted RBP7.53□□□□□ -1.2
CKS1B-204ENST00000471245 KIR2DL2P43627 348 aaPredicted RBP7.53□□□□□ -1.2
CKS1B-204ENST00000471245 GP2P55259 537 aaKnown RBP7.53□□□□□ -1.2
CKS1B-204ENST00000471245 IL2P60568 153 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 LACTBP83111 547 aaPredicted RBP7.53□□□□□ -1.2
CKS1B-204ENST00000471245 TMPRSS15P98073 1019 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 MTMR1Q13613 665 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 ARHGAP44Q17R89 818 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 HSP90AB2PQ58FF8 381 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 ANGEL2Q5VTE6 544 aaKnown RBP7.53□□□□□ -1.2
CKS1B-204ENST00000471245 NOL8Q76FK4 1167 aaKnown RBP7.53□□□□□ -1.2
CKS1B-204ENST00000471245 OTOP1Q7RTM1 612 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 NBPF11Q86T75 865 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 NXPE1Q8N323 547 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 FLCNQ8NFG4 579 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 LINC01599Q8WXQ3 324 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 DPF3Q92784 378 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 CLDND1Q9NY35 253 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 TET3O43151 1660 aa7.53□□□□□ -1.2
CKS1B-204ENST00000471245 PRDM15P57071 1507 aaPredicted RBP7.52□□□□□ -1.2
CKS1B-204ENST00000471245 CHD2O14647 1828 aaKnown RBP7.52□□□□□ -1.2
CKS1B-204ENST00000471245 MAST1Q9Y2H9 1570 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 JCADQ9P266 1359 aa7.52□□□□□ -1.21
CKS1B-204ENST00000471245 A0A1W2PQ45 241 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms