RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 FAM47CQ5HY64 1035 aa22.39■■□□□ 1.17
HDAC7-220ENST00000471235 UTP14CQ5TAP6 766 aaKnown RBP22.39■■□□□ 1.17
HDAC7-220ENST00000471235 SH3RF1Q7Z6J0 888 aa22.39■■□□□ 1.17
HDAC7-220ENST00000471235 SEPT1Q8WYJ6 367 aa22.39■■□□□ 1.17
HDAC7-220ENST00000471235 FOXP1Q9H334 677 aaPredicted RBP22.39■■□□□ 1.17
HDAC7-220ENST00000471235 PRDM5Q9NQX1 630 aaPredicted RBP22.39■■□□□ 1.17
HDAC7-220ENST00000471235 DDX25Q9UHL0 483 aaKnown RBP22.39■■□□□ 1.17
HDAC7-220ENST00000471235 SCN5AQ14524 2016 aa22.39■■□□□ 1.17
HDAC7-220ENST00000471235 EMSYQ7Z589 1322 aa22.38■■□□□ 1.17
HDAC7-220ENST00000471235 KIF28PB7ZC32 967 aa22.38■■□□□ 1.17
HDAC7-220ENST00000471235 TLR3O15455 904 aaKnown RBP22.38■■□□□ 1.17
HDAC7-220ENST00000471235 B4GALT4O60513 344 aa22.38■■□□□ 1.17
HDAC7-220ENST00000471235 CD4P01730 458 aa22.38■■□□□ 1.17
HDAC7-220ENST00000471235 PRPF38BQ5VTL8 546 aaKnown RBP22.38■■□□□ 1.17
HDAC7-220ENST00000471235 ETNPPLQ8TBG4 499 aa22.38■■□□□ 1.17
HDAC7-220ENST00000471235 SLC5A5Q92911 643 aa22.38■■□□□ 1.17
HDAC7-220ENST00000471235 TBC1D22BQ9NU19 505 aa22.38■■□□□ 1.17
HDAC7-220ENST00000471235 ARID2Q68CP9 1835 aa22.37■■□□□ 1.17
HDAC7-220ENST00000471235 H3BRB1 525 aa22.37■■□□□ 1.17
HDAC7-220ENST00000471235 WNT7AO00755 349 aa22.37■■□□□ 1.17
HDAC7-220ENST00000471235 CCNT1O60563 726 aaKnown RBP22.37■■□□□ 1.17
HDAC7-220ENST00000471235 PTPN11Q06124 597 aaPredicted RBP22.37■■□□□ 1.17
HDAC7-220ENST00000471235 PPP4R3AQ6IN85 833 aa22.37■■□□□ 1.17
HDAC7-220ENST00000471235 SESTD1Q86VW0 696 aa22.37■■□□□ 1.17
HDAC7-220ENST00000471235 GJA10Q969M2 543 aa22.37■■□□□ 1.17
HDAC7-220ENST00000471235 NAP1L4Q99733 375 aaKnown RBP22.37■■□□□ 1.17
HDAC7-220ENST00000471235 TRPV6Q9H1D0 765 aa22.37■■□□□ 1.17
HDAC7-220ENST00000471235 TUT1Q9H6E5 874 aaKnown RBP22.37■■□□□ 1.17
HDAC7-220ENST00000471235 TBX21Q9UL17 535 aa22.37■■□□□ 1.17
HDAC7-220ENST00000471235 SIP14410 1827 aa22.36■■□□□ 1.17
HDAC7-220ENST00000471235 TRIM43BA6NCK2 446 aa22.36■■□□□ 1.17
HDAC7-220ENST00000471235 LGR5O75473 907 aa22.36■■□□□ 1.17
HDAC7-220ENST00000471235 HSCBQ8IWL3 235 aa22.36■■□□□ 1.17
HDAC7-220ENST00000471235 TRIM43Q96BQ3 446 aaPredicted RBP22.36■■□□□ 1.17
HDAC7-220ENST00000471235 PCYT2Q99447 389 aa22.36■■□□□ 1.17
HDAC7-220ENST00000471235 RIT2Q99578 217 aa22.36■■□□□ 1.17
HDAC7-220ENST00000471235 TRMT13Q9NUP7 481 aaKnown RBP22.36■■□□□ 1.17
HDAC7-220ENST00000471235 HDAC6Q9UBN7 1215 aa22.36■■□□□ 1.17
HDAC7-220ENST00000471235 ZNF215Q9UL58 517 aaPredicted RBP22.36■■□□□ 1.17
HDAC7-220ENST00000471235 EVPLQ92817 2033 aa22.35■■□□□ 1.17
HDAC7-220ENST00000471235 KIAA0355O15063 1070 aa22.35■■□□□ 1.17
HDAC7-220ENST00000471235 GAS7O60861 476 aa22.35■■□□□ 1.17
HDAC7-220ENST00000471235 ATG7O95352 703 aa22.35■■□□□ 1.17
HDAC7-220ENST00000471235 KRT76Q01546 638 aa22.35■■□□□ 1.17
HDAC7-220ENST00000471235 GNL2Q13823 731 aaKnown RBP22.35■■□□□ 1.17
HDAC7-220ENST00000471235 LRCH2Q5VUJ6 765 aa22.35■■□□□ 1.17
HDAC7-220ENST00000471235 ZNF746Q6NUN9 644 aaPredicted RBP22.35■■□□□ 1.17
HDAC7-220ENST00000471235 POTEDQ86YR6 584 aa22.35■■□□□ 1.17
HDAC7-220ENST00000471235 NOSTRINQ8IVI9 506 aa22.35■■□□□ 1.17
HDAC7-220ENST00000471235 TEKT3Q9BXF9 490 aa22.35■■□□□ 1.17
HDAC7-220ENST00000471235 KCNMB3Q9NPA1 279 aa22.35■■□□□ 1.17
HDAC7-220ENST00000471235 TMEM39AQ9NV64 488 aa22.35■■□□□ 1.17
HDAC7-220ENST00000471235 PRKAG2Q9UGJ0 569 aa22.35■■□□□ 1.17
HDAC7-220ENST00000471235 GTF2IRD1Q9UHL9 959 aa22.35■■□□□ 1.17
HDAC7-220ENST00000471235 TCEAL9Q9UHQ7 104 aa22.35■■□□□ 1.17
HDAC7-220ENST00000471235 LOXHD1Q8IVV2 1947 aa22.34■■□□□ 1.17
HDAC7-220ENST00000471235 PSMD10O75832 226 aa22.34■■□□□ 1.17
HDAC7-220ENST00000471235 SUPT20HL2P0C7V6 817 aa22.34■■□□□ 1.17
HDAC7-220ENST00000471235 U2AF2P26368 475 aaKnown RBP eCLIP22.34■■□□□ 1.17
HDAC7-220ENST00000471235 GDF6Q6KF10 455 aaPredicted RBP22.34■■□□□ 1.17
HDAC7-220ENST00000471235 ABHD15Q6UXT9 468 aa22.34■■□□□ 1.17
HDAC7-220ENST00000471235 C7orf31Q8N865 590 aa22.34■■□□□ 1.17
HDAC7-220ENST00000471235 INTS4Q96HW7 963 aaKnown RBP22.34■■□□□ 1.17
HDAC7-220ENST00000471235 IGKV6D-21A0A0A0MT36 114 aa22.33■■□□□ 1.17
HDAC7-220ENST00000471235 SMIM10L2AP0DMW4 78 aa22.33■■□□□ 1.17
HDAC7-220ENST00000471235 SMIM10L2BP0DMW5 78 aa22.33■■□□□ 1.17
HDAC7-220ENST00000471235 SMAP1Q8IYB5 467 aaPredicted RBP22.33■■□□□ 1.17
HDAC7-220ENST00000471235 GLG1Q92896 1179 aa22.33■■□□□ 1.17
HDAC7-220ENST00000471235 CTAGE1Q96RT6 745 aa22.33■■□□□ 1.17
HDAC7-220ENST00000471235 UNC45AQ9H3U1 944 aa22.33■■□□□ 1.17
HDAC7-220ENST00000471235 SMARCAD1Q9H4L7 1026 aa22.33■■□□□ 1.17
HDAC7-220ENST00000471235 FOXD4L1Q9NU39 408 aa22.33■■□□□ 1.17
HDAC7-220ENST00000471235 H3BQV1 296 aa22.32■■□□□ 1.16
HDAC7-220ENST00000471235 ITGB8P26012 769 aa22.32■■□□□ 1.16
HDAC7-220ENST00000471235 MARK3P27448 753 aa22.32■■□□□ 1.16
HDAC7-220ENST00000471235 HOXC8P31273 242 aa22.32■■□□□ 1.16
HDAC7-220ENST00000471235 HIC1Q14526 733 aa22.32■■□□□ 1.16
HDAC7-220ENST00000471235 MIS18BP1Q6P0N0 1132 aa22.32■■□□□ 1.16
HDAC7-220ENST00000471235 CCDC60Q8IWA6 550 aaPredicted RBP22.32■■□□□ 1.16
HDAC7-220ENST00000471235 HAS1Q92839 578 aa22.32■■□□□ 1.16
HDAC7-220ENST00000471235 AZI2Q9H6S1 392 aa22.32■■□□□ 1.16
HDAC7-220ENST00000471235 ERAP1Q9NZ08 941 aa22.32■■□□□ 1.16
HDAC7-220ENST00000471235 WDR64B1ANS9 1081 aa22.31■■□□□ 1.16
HDAC7-220ENST00000471235 TBX3O15119 743 aa22.31■■□□□ 1.16
HDAC7-220ENST00000471235 CHMP2AO43633 222 aa22.31■■□□□ 1.16
HDAC7-220ENST00000471235 CYP2C9P11712 490 aa22.31■■□□□ 1.16
HDAC7-220ENST00000471235 ATP2B1P20020 1258 aa22.31■■□□□ 1.16
HDAC7-220ENST00000471235 MAGEA10P43363 369 aaPredicted RBP22.31■■□□□ 1.16
HDAC7-220ENST00000471235 PTGISQ16647 500 aa22.31■■□□□ 1.16
HDAC7-220ENST00000471235 LARP1BQ659C4 914 aaKnown RBP22.31■■□□□ 1.16
HDAC7-220ENST00000471235 MCTP1Q6DN14 999 aa22.31■■□□□ 1.16
HDAC7-220ENST00000471235 B3GNT9Q6UX72 402 aa22.31■■□□□ 1.16
HDAC7-220ENST00000471235 AFAP1L1Q8TED9 768 aa22.31■■□□□ 1.16
HDAC7-220ENST00000471235 FAM20AQ96MK3 541 aa22.31■■□□□ 1.16
HDAC7-220ENST00000471235 RNPEPQ9H4A4 650 aa22.31■■□□□ 1.16
HDAC7-220ENST00000471235 VAV3Q9UKW4 847 aa22.31■■□□□ 1.16
HDAC7-220ENST00000471235 IGSF9BQ9UPX0 1349 aa22.31■■□□□ 1.16
HDAC7-220ENST00000471235 BACH1O14867 736 aa22.3■■□□□ 1.16
HDAC7-220ENST00000471235 NEMFO60524 1076 aa22.3■■□□□ 1.16
HDAC7-220ENST00000471235 RAG1P15918 1043 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms