RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 DPYDQ12882 1025 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 IDI1Q13907 227 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 ITIH4Q14624 930 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 TDRD12Q587J7 1177 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 SOGA3Q5TF21 947 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 NT5DC1Q5TFE4 455 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 CCNJLQ8IV13 435 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 DIS3L2Q8IYB7 885 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 MREGQ8N565 214 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 UCMAQ8WVF2 138 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 TAF4BQ92750 862 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 SUCLG2Q96I99 432 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 RAB17Q9H0T7 212 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 ATXN10Q9UBB4 475 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 NKX1-2Q9UD57 310 aaPredicted RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 LIMA1Q9UHB6 759 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 ATP8A1Q9Y2Q0 1164 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 PCDHB6Q9Y5E3 794 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 PCDHA13Q9Y5I0 950 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 GPR75-ASB3A0A0A6YYF3 556 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 FAM237AA0A1B0GTK4 181 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 GNAT3A8MTJ3 354 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 HNRNPRO43390 633 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 SUPT3HO75486 399 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 SUN1O94901 812 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 S1PR4O95977 384 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 ETS2P15036 469 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 TNFRSF8P28908 595 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 HSPA9P38646 679 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 MTIF2P46199 727 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 USP46P62068 366 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 ITIH3Q06033 890 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 DHX9Q08211 1270 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 EHHADHQ08426 723 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 TMED1Q13445 227 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 LBRQ14739 615 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 LRRC14Q15048 493 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 ERMARDQ5T6L9 678 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 OLFML2BQ68BL8 750 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 LRIG3Q6UXM1 1119 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 HOOK3Q86VS8 718 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 VSIG1Q86XK7 387 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 NOSTRINQ8IVI9 506 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 PAGE5Q96GU1 130 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 HIC2Q96JB3 615 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 NOX5Q96PH1 765 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 RAB3IPQ96QF0 476 aaPredicted RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 AGXT2Q9BYV1 514 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 CARD9Q9H257 536 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 DPH5Q9H2P9 285 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 DMAP1Q9NPF5 467 aaPredicted RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 DBF4Q9UBU7 674 aaPredicted RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 LNPEPQ9UIQ6 1025 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 PAIP2BQ9ULR5 123 aaKnown RBP4.61□□□□□ -1.67
VPS50-210ENST00000471188 CAPN11Q9UMQ6 739 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 ASB3Q9Y575 518 aa4.61□□□□□ -1.67
VPS50-210ENST00000471188 AFF2P51816 1311 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 MAP3K19Q56UN5 1328 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 GOLGA8AA7E2F4 631 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 MBD4O95243 580 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 ZCCHC18P0CG32 403 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 ALADP13716 330 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 PEX5P50542 639 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 ZNF131P52739 623 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 CACNA2D1P54289 1103 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 TFCP2Q12800 502 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 NR5A1Q13285 461 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 MTMR3Q13615 1198 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 P3H1Q32P28 736 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 KBTBD12Q3ZCT8 623 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 AGBL2Q5U5Z8 902 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 MIGA2Q7L4E1 593 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 TMC4Q7Z404 712 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 APBB1IPQ7Z5R6 666 aaPredicted RBP4.6□□□□□ -1.67
VPS50-210ENST00000471188 APLFQ8IW19 511 aaPredicted RBP4.6□□□□□ -1.67
VPS50-210ENST00000471188 SCUBE3Q8IX30 993 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 KBTBD3Q8NAB2 608 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 NCOA7Q8NI08 942 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 GSDMAQ96QA5 445 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 DNAJC7Q99615 494 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 DSCC1Q9BVC3 393 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 KRT23Q9C075 422 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 SH2D4AQ9H788 454 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 SENP2Q9HC62 589 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 MLXIPLQ9NP71 852 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 CABP5Q9NP86 173 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.6□□□□□ -1.67
VPS50-210ENST00000471188 FBXO2Q9UK22 296 aaPredicted RBP4.6□□□□□ -1.67
VPS50-210ENST00000471188 PHF24Q9UPV7 400 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 GDAQ9Y2T3 454 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 TMEM131LA2VDJ0 1609 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 CEMIPQ8WUJ3 1361 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 GRM8O00222 908 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 RGS16O15492 202 aaPredicted RBP4.6□□□□□ -1.67
VPS50-210ENST00000471188 MAFGO15525 162 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 ASAP2O43150 1006 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 SART1O43290 800 aaKnown RBP4.6□□□□□ -1.67
VPS50-210ENST00000471188 CEP104O60308 925 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 TMCC1O94876 653 aa4.6□□□□□ -1.67
VPS50-210ENST00000471188 UBTFL6P0CB48 400 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms