RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 IFT43Q96FT9 208 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 ADNPQ9H2P0 1102 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 RUBCNLQ9H714 662 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 ADA2Q9NZK5 511 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 ARMCX3Q9UH62 379 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-210ENST00000471181 MID2Q9UJV3 735 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 TRAF3IP3Q9Y228 551 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 CROCC2H7BZ55 1655 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 TTC21BQ7Z4L5 1316 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 NPM3O75607 178 aaKnown RBP7.41□□□□□ -1.22
BRCA1-210ENST00000471181 ZMYND10O75800 440 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 SEC31AO94979 1220 aaKnown RBP7.41□□□□□ -1.22
BRCA1-210ENST00000471181 AFPP02771 609 aaKnown RBP7.41□□□□□ -1.22
BRCA1-210ENST00000471181 POLR2MP0CAP2 368 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 PAMP19021 973 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 PLD3Q8IV08 490 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 FAM178BQ8IXR5 827 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 SYT2Q8N9I0 419 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-210ENST00000471181 EGFL8Q99944 293 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 TMEM161AQ9NX61 479 aa7.41□□□□□ -1.22
BRCA1-210ENST00000471181 EXOC1LA0A1B0GW35 172 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 F5H423 210 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-210ENST00000471181 H0YCG3 227 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 NFKBIAP25963 317 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 PAPOLAP51003 745 aaKnown RBP7.4□□□□□ -1.22
BRCA1-210ENST00000471181 MDM2Q00987 491 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-210ENST00000471181 C10orf76Q5T2E6 689 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 THEMIS2Q5TEJ8 643 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 KLHL24Q6TFL4 600 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 REXO1Q8N1G1 1221 aaKnown RBP7.4□□□□□ -1.22
BRCA1-210ENST00000471181 ANKRD13CQ8N6S4 541 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 ZBED2Q9BTP6 218 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 XPO4Q9C0E2 1151 aaKnown RBP7.4□□□□□ -1.22
BRCA1-210ENST00000471181 ZWILCHQ9H900 591 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 LRRC4Q9HBW1 653 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 RAD18Q9NS91 495 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 DNAJC17Q9NVM6 304 aaKnown RBP7.4□□□□□ -1.22
BRCA1-210ENST00000471181 PPARGC1AQ9UBK2 798 aaKnown RBP7.4□□□□□ -1.22
BRCA1-210ENST00000471181 DPYSL4O14531 572 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 CTNND1O60716 968 aaKnown RBP7.4□□□□□ -1.22
BRCA1-210ENST00000471181 MYO1DO94832 1006 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 FMNL1O95466 1100 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-210ENST00000471181 H2AFZP0C0S5 128 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 EFTUD2Q15029 972 aaKnown RBP eCLIP7.4□□□□□ -1.22
BRCA1-210ENST00000471181 BBS9Q3SYG4 887 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 C1orf146Q5VVC0 180 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 ELMSAN1Q6PJG2 1045 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 ACAD11Q709F0 780 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 H2AFVQ71UI9 128 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 TBC1D1Q86TI0 1168 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-210ENST00000471181 NBPF15Q8N660 670 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.4□□□□□ -1.22
BRCA1-210ENST00000471181 TTC17Q96AE7 1141 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 FTOQ9C0B1 505 aaKnown RBP eCLIP7.4□□□□□ -1.22
BRCA1-210ENST00000471181 BICC1Q9H694 974 aaKnown RBP7.4□□□□□ -1.22
BRCA1-210ENST00000471181 CACNA2D2Q9NY47 1150 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 FGD6Q6ZV73 1430 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 PRPSAP2O60256 369 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 ALDH1L1O75891 902 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 PDE6BP35913 854 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 ADAM9Q13443 819 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 POLA2Q14181 598 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 SKIV2LQ15477 1246 aaKnown RBP7.4□□□□□ -1.22
BRCA1-210ENST00000471181 CDO1Q16878 200 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 ADCK5Q3MIX3 580 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 CEP85Q6P2H3 762 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 CCDC51Q96ER9 411 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 NLRP4Q96MN2 994 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 SLC39A2Q9NP94 309 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 SLC52A1Q9NWF4 448 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 PPP2R2CQ9Y2T4 447 aa7.4□□□□□ -1.22
BRCA1-210ENST00000471181 RAPGEF6Q8TEU7 1601 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 E5RI56 91 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 SLC27A2O14975 620 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 ARL4DP49703 201 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 APBA1Q02410 837 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 INAQ16352 499 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 LRRC8EQ6NSJ5 796 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 SCARA5Q6ZMJ2 495 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 DPP9Q86TI2 863 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 ELMOD1Q8N336 334 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 OR8K1Q8NGG5 319 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.4□□□□□ -1.236e-6■■□□□ 12.9
BRCA1-210ENST00000471181 LZTS2Q9BRK4 669 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 AP5M1Q9H0R1 490 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 RNPEPQ9H4A4 650 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 TSC22D4Q9Y3Q8 395 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 MAPK13O15264 365 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 TSC22D2O75157 780 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 NUP62P37198 522 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-210ENST00000471181 SERPINB10P48595 397 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 DLGAP5Q15398 846 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 E2F4Q16254 413 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 FAM173BQ6P4H8 233 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 TADA2BQ86TJ2 420 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 NT5C1BQ96P26 610 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 TMEM245Q9H330 911 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 EPB41L5Q9HCM4 733 aa7.4□□□□□ -1.23
BRCA1-210ENST00000471181 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-210ENST00000471181 DDX25Q9UHL0 483 aaKnown RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 352.7 ms