RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 KIAA1671Q9BY89 1806 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 RALGAPA1Q6GYQ0 2036 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 USP17L12C9JPN9 530 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 USP17L21D6R901 530 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 LAMTOR5O43504 91 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 ZBED4O75132 1171 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 PARNO95453 639 aaKnown RBP6.98□□□□□ -1.29
VARS-222ENST00000470953 NDUFB10O96000 172 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 RETP07949 1114 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 WEE2P0C1S8 567 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 CCR10P46092 362 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 CDK8P49336 464 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 TROAPQ12815 778 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 KCNC3Q14003 757 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 HIC1Q14526 733 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 MUM1L1Q5H9M0 696 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 LAIR1Q6GTX8 287 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 CEP85Q6P2H3 762 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 TSSK4Q6SA08 328 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 ZNF843Q8N446 348 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 MORC4Q8TE76 937 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 POF1BQ8WVV4 589 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 SLC39A7Q92504 469 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 KAT2BQ92831 832 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 NELL1Q92832 810 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 CLP1Q92989 425 aaKnown RBP6.98□□□□□ -1.29
VARS-222ENST00000470953 IL17RAQ96F46 866 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 IFIH1Q9BYX4 1025 aaKnown RBP6.98□□□□□ -1.29
VARS-222ENST00000470953 FOXQ1Q9C009 403 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 VTA1Q9NP79 307 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 DCP1AQ9NPI6 582 aaPredicted RBP6.98□□□□□ -1.29
VARS-222ENST00000470953 SPATA6Q9NWH7 488 aaPredicted RBP6.98□□□□□ -1.29
VARS-222ENST00000470953 TLR7Q9NYK1 1049 aaKnown RBP6.98□□□□□ -1.29
VARS-222ENST00000470953 EXOC6BQ9Y2D4 811 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 RWDD3Q9Y3V2 267 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 ASXL3Q9C0F0 2248 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 PLXNA4Q9HCM2 1894 aa6.98□□□□□ -1.29
VARS-222ENST00000470953 RBM47A0AV96 593 aaKnown RBP6.97□□□□□ -1.29
VARS-222ENST00000470953 A6NJR5 290 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 F5H6K3 240 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 PRKAB2O43741 272 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 SEC24BO95487 1268 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 CAPNS1P04632 268 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 MMP3P08254 477 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 NOVA1P51513 510 aaKnown RBP6.97□□□□□ -1.29
VARS-222ENST00000470953 SNAP25P60880 206 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 ATP8B2P98198 1209 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 KLRC3Q07444 240 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 POLA2Q14181 598 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 DUSP6Q16828 381 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 AASDHQ4L235 1098 aaPredicted RBP6.97□□□□□ -1.29
VARS-222ENST00000470953 TNNI3KQ59H18 835 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 KIAA1211LQ6NV74 962 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 LLGL2Q6P1M3 1020 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 AACSQ86V21 672 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 SSH3Q8TE77 659 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 ACAD9Q9H845 621 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 KANSL2Q9H9L4 492 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 RNF146Q9NTX7 359 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 CYP39A1Q9NYL5 469 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 HDAC6Q9UBN7 1215 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 SWAP70Q9UH65 585 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 FPGT-TNNI3KV9GXZ4 949 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 MYH8P13535 1937 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 ADGRA3Q8IWK6 1321 aa6.97□□□□□ -1.29
VARS-222ENST00000470953 MAGEB6P1A0A0J9YX57 407 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 ARIH2O95376 493 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 RIPPLY3P57055 190 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 SLFNL1Q499Z3 407 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 PLEKHG4Q58EX7 1191 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 TMEM184AQ6ZMB5 413 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 SESTD1Q86VW0 696 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 CLASRPQ8N2M8 674 aaKnown RBP6.96□□□□□ -1.3
VARS-222ENST00000470953 LCORLQ8N3X6 602 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 KLHL23Q8NBE8 558 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 PJA1Q8NG27 643 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 P2RX5Q93086 422 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 CRELD1Q96HD1 420 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 CCDC17Q96LX7 622 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 TRERF1Q96PN7 1200 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 PLVAPQ9BX97 442 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 RC3H2Q9HBD1 1191 aaKnown RBP6.96□□□□□ -1.3
VARS-222ENST00000470953 WNT16Q9UBV4 365 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 ZBTB47Q9UFB7 747 aaPredicted RBP6.96□□□□□ -1.3
VARS-222ENST00000470953 GTF2IRD1Q9UHL9 959 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 KLK13Q9UKR3 277 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 RAB23Q9ULC3 237 aa6.96□□□□□ -1.3
VARS-222ENST00000470953 CTDP1Q9Y5B0 961 aaPredicted RBP6.96□□□□□ -1.3
VARS-222ENST00000470953 MIA3Q5JRA6 1907 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 BAZ2AQ9UIF9 1905 aaKnown RBP6.95□□□□□ -1.3
VARS-222ENST00000470953 HYAL3O43820 417 aaPredicted RBP6.95□□□□□ -1.3
VARS-222ENST00000470953 IFIT2P09913 472 aaKnown RBP6.95□□□□□ -1.3
VARS-222ENST00000470953 ALAS1P13196 640 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 OAZ1P54368 228 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 KCNC4Q03721 635 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 SF3A2Q15428 464 aaKnown RBP6.95□□□□□ -1.3
VARS-222ENST00000470953 STPG1Q5TH74 334 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 PHLDB3Q6NSJ2 640 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 C16orf86Q6ZW13 317 aa6.95□□□□□ -1.3
VARS-222ENST00000470953 CERS3Q8IU89 383 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms