RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 EYA4O95677 639 aa18.79■□□□□ 0.6
SMARCD3-206ENST00000470588 SETQ01105 290 aaPredicted RBP18.79■□□□□ 0.6
SMARCD3-206ENST00000470588 LRRC41Q15345 812 aa18.79■□□□□ 0.6
SMARCD3-206ENST00000470588 TSR1Q2NL82 804 aaKnown RBP18.79■□□□□ 0.6
SMARCD3-206ENST00000470588 EAPPQ56P03 285 aaPredicted RBP18.79■□□□□ 0.6
SMARCD3-206ENST00000470588 MIIPQ5JXC2 388 aa18.79■□□□□ 0.6
SMARCD3-206ENST00000470588 RAD9BQ6WBX8 426 aa18.79■□□□□ 0.6
SMARCD3-206ENST00000470588 ERGIC2Q96RQ1 377 aa18.79■□□□□ 0.6
SMARCD3-206ENST00000470588 RPAP3Q9H6T3 665 aaPredicted RBP18.79■□□□□ 0.6
SMARCD3-206ENST00000470588 EMILIN3Q9NT22 766 aa18.79■□□□□ 0.6
SMARCD3-206ENST00000470588 FZD1Q9UP38 647 aa18.79■□□□□ 0.6
SMARCD3-206ENST00000470588 LUC7L2Q9Y383 392 aaKnown RBP18.79■□□□□ 0.6
SMARCD3-206ENST00000470588 ADGRG1Q9Y653 693 aa18.79■□□□□ 0.6
SMARCD3-206ENST00000470588 WDR90Q96KV7 1748 aa18.79■□□□□ 0.6
SMARCD3-206ENST00000470588 RNF225M0QZC1 329 aaPredicted RBP18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 ZBED4O75132 1171 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 PSMC6P62333 389 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 GIT2Q14161 759 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 LRCH2Q5VUJ6 765 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 RBM46Q8TBY0 533 aaKnown RBP18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 CLEC4DQ8WXI8 215 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 C12orf42Q96LP6 360 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 HSD17B14Q9BPX1 270 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 WDR11Q9BZH6 1224 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 TAF1DQ9H5J8 278 aaPredicted RBP18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 SLC38A10Q9HBR0 1119 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 NPHP3-ACAD11A0A0J9YXS1 232 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 TTC26A0AVF1 554 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 EML1O00423 815 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 FKBP3Q00688 224 aaKnown RBP18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 MAN2A1Q16706 1144 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 VWA3BQ502W6 1294 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 ZCWPW2Q504Y3 356 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 FIGNQ5HY92 759 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 NIPA1Q7RTP0 329 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 CDCA5Q96FF9 252 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 CEP63Q96MT8 703 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 MXRA8Q9BRK3 442 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 PPP1R9AQ9ULJ8 1098 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 OTOFQ9HC10 1997 aa18.78■□□□□ 0.6
SMARCD3-206ENST00000470588 PABPC4Q13310 644 aaKnown RBP eCLIP18.77■□□□□ 0.6
SMARCD3-206ENST00000470588 TTLL12Q14166 644 aaPredicted RBP18.77■□□□□ 0.6
SMARCD3-206ENST00000470588 MTF1Q14872 753 aa18.77■□□□□ 0.6
SMARCD3-206ENST00000470588 LRRC55Q6ZSA7 311 aa18.77■□□□□ 0.6
SMARCD3-206ENST00000470588 DNAJC7Q99615 494 aa18.77■□□□□ 0.6
SMARCD3-206ENST00000470588 L2HGDHQ9H9P8 463 aa18.77■□□□□ 0.6
SMARCD3-206ENST00000470588 DNAI1Q9UI46 699 aa18.77■□□□□ 0.6
SMARCD3-206ENST00000470588 RPTORQ8N122 1335 aa18.77■□□□□ 0.59
SMARCD3-206ENST00000470588 PAPPA2Q9BXP8 1791 aa18.77■□□□□ 0.59
SMARCD3-206ENST00000470588 GAS7O60861 476 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 SLITRK3O94933 977 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 GNA14O95837 355 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 BCRP11274 1271 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 HMGCS2P54868 508 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 VGLL4Q14135 290 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 EPHA7Q15375 998 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 GLIS3Q8NEA6 775 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 EEF2KMTQ96G04 330 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 RIT2Q99578 217 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 ZNF577Q9BSK1 485 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 NDST4Q9H3R1 872 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 RBBP6Q7Z6E9 1792 aaKnown RBP18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 A0A1W2PQJ5 194 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 UBXN2AP68543 259 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 PPP4R3CPQ6ZMV5 832 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 DESI2Q9BSY9 194 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 TEKT3Q9BXF9 490 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 RGL1Q9NZL6 768 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 TBC1D7Q9P0N9 293 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 AFG3L2Q9Y4W6 797 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 SNCAIPQ9Y6H5 919 aa18.76■□□□□ 0.59
SMARCD3-206ENST00000470588 PARP14Q460N5 1801 aa18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 RASSF10A6NK89 507 aa18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 TRAF5O00463 557 aa18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 ARP10275 920 aa18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 ALAS1P13196 640 aa18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 ERVK-24P63145 666 aa18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 ZBED6P86452 979 aa18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 MTERF4Q7Z6M4 381 aaKnown RBP18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 ANKRD13AQ8IZ07 590 aa18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 SCFD1Q8WVM8 642 aa18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 DYDC2Q96IM9 177 aa18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 TTYH3Q9C0H2 523 aa18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 KCTD10Q9H3F6 313 aa18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 RAVER2Q9HCJ3 691 aaKnown RBP18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 CLEC11AQ9Y240 323 aa18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 COL4A3BPQ9Y5P4 624 aa18.75■□□□□ 0.59
SMARCD3-206ENST00000470588 SLU7O95391 586 aaKnown RBP18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 GAP43P17677 238 aa18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 CASQ1P31415 396 aa18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 RBM10P98175 930 aaKnown RBP18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 CYP4A11Q02928 519 aa18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 DGKZQ13574 1117 aa18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 EDRF1Q3B7T1 1238 aa18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 B3GNT9Q6UX72 402 aa18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 ARMC9Q7Z3E5 817 aa18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 ZC3H3Q8IXZ2 948 aaKnown RBP18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 CPXCR1Q8N123 301 aa18.74■□□□□ 0.59
SMARCD3-206ENST00000470588 ZNF397Q8NF99 534 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms