RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 DEFB103AP81534 67 aa10.33□□□□□ -0.76
XRN1-208ENST00000470537 ZNF543Q08ER8 600 aa10.33□□□□□ -0.76
XRN1-208ENST00000470537 RRP12Q5JTH9 1297 aaKnown RBP10.33□□□□□ -0.76
XRN1-208ENST00000470537 CHST3Q7LGC8 479 aa10.33□□□□□ -0.76
XRN1-208ENST00000470537 BANK1Q8NDB2 785 aa10.33□□□□□ -0.76
XRN1-208ENST00000470537 PPTC7Q8NI37 304 aa10.33□□□□□ -0.76
XRN1-208ENST00000470537 NEK9Q8TD19 979 aa10.33□□□□□ -0.76
XRN1-208ENST00000470537 COPS5Q92905 334 aa10.33□□□□□ -0.76
XRN1-208ENST00000470537 RMDN3Q96TC7 470 aa10.33□□□□□ -0.76
XRN1-208ENST00000470537 SEC62Q99442 399 aaKnown RBP10.33□□□□□ -0.76
XRN1-208ENST00000470537 PRRX2Q99811 253 aa10.33□□□□□ -0.76
XRN1-208ENST00000470537 RNF41Q9H4P4 317 aaPredicted RBP10.33□□□□□ -0.76
XRN1-208ENST00000470537 CD320Q9NPF0 282 aa10.33□□□□□ -0.76
XRN1-208ENST00000470537 TET1Q8NFU7 2136 aa10.33□□□□□ -0.76
XRN1-208ENST00000470537 ABCB11O95342 1321 aa10.33□□□□□ -0.76
XRN1-208ENST00000470537 FRMPD2Q68DX3 1309 aaPredicted RBP10.33□□□□□ -0.76
XRN1-208ENST00000470537 TANC1Q9C0D5 1861 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 BRWD1Q9NSI6 2320 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 RSPH10B2B2RC85 870 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 WNT7AO00755 349 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 CAND2O75155 1236 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 WFS1O76024 890 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 RSPH10BP0C881 870 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 TRAF1Q13077 416 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 LY6KQ17RY6 165 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 KIAA0753Q2KHM9 967 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 ARHGEF16Q5VV41 709 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 MFSD6Q6ZSS7 791 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 EP400NLQ6ZTU2 488 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 MYOCDQ8IZQ8 938 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 SEPT8Q92599 483 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 PABPC5Q96DU9 382 aaKnown RBP10.32□□□□□ -0.76
XRN1-208ENST00000470537 YME1L1Q96TA2 773 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 HELLSQ9NRZ9 838 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 MAP3K20Q9NYL2 800 aaKnown RBP10.32□□□□□ -0.76
XRN1-208ENST00000470537 HDAC6Q9UBN7 1215 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 MRPL11Q9Y3B7 192 aaKnown RBP10.32□□□□□ -0.76
XRN1-208ENST00000470537 RWDD3Q9Y3V2 267 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 MRVI1Q9Y6F6 885 aa10.32□□□□□ -0.76
XRN1-208ENST00000470537 H3BNC9 293 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 F2P00734 622 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 RB1P06400 928 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 TGFB3P10600 412 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 HSPD1P10809 573 aaKnown RBP10.31□□□□□ -0.76
XRN1-208ENST00000470537 GNAT1P11488 350 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 IL9P15248 144 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 MFAP1P55081 439 aaKnown RBP10.31□□□□□ -0.76
XRN1-208ENST00000470537 HTRA4P83105 476 aaPredicted RBP10.31□□□□□ -0.76
XRN1-208ENST00000470537 ARHGAP1Q07960 439 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 GPM6BQ13491 265 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 GPNMBQ14956 572 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 USH1GQ495M9 461 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 EPC2Q52LR7 807 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 ZNF618Q5T7W0 954 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 TSHZ3Q63HK5 1081 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 FAM117BQ6P1L5 589 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 IQCA1Q86XH1 822 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 DGKHQ86XP1 1220 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 ADHFE1Q8IWW8 467 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 SAMD3Q8N6K7 520 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 ESR2Q92731 530 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 KAT2BQ92831 832 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 PPP2R3CQ969Q6 453 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 EVI5LQ96CN4 794 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 ALG1Q9BT22 464 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 NSUN3Q9H649 340 aaKnown RBP10.31□□□□□ -0.76
XRN1-208ENST00000470537 DDX41Q9UJV9 622 aaKnown RBP10.31□□□□□ -0.76
XRN1-208ENST00000470537 RCAN3Q9UKA8 241 aa10.31□□□□□ -0.76
XRN1-208ENST00000470537 ARIH2O95376 493 aa10.3□□□□□ -0.76
XRN1-208ENST00000470537 FGAP02671 866 aa10.3□□□□□ -0.76
XRN1-208ENST00000470537 SNHG28P0DPA3 235 aa10.3□□□□□ -0.76
XRN1-208ENST00000470537 MX1P20591 662 aa10.3□□□□□ -0.76
XRN1-208ENST00000470537 THPOP40225 353 aa10.3□□□□□ -0.76
XRN1-208ENST00000470537 NHLH1Q02575 133 aa10.3□□□□□ -0.76
XRN1-208ENST00000470537 TMCO2Q7Z6W1 182 aaPredicted RBP10.3□□□□□ -0.76
XRN1-208ENST00000470537 TMEM192Q8IY95 271 aa10.3□□□□□ -0.76
XRN1-208ENST00000470537 DBF4BQ8NFT6 615 aa10.3□□□□□ -0.76
XRN1-208ENST00000470537 SNIP1Q8TAD8 396 aaKnown RBP10.3□□□□□ -0.76
XRN1-208ENST00000470537 PPP1R13LQ8WUF5 828 aa10.3□□□□□ -0.76
XRN1-208ENST00000470537 DHX38Q92620 1227 aaKnown RBP10.3□□□□□ -0.76
XRN1-208ENST00000470537 APBB2Q92870 758 aa10.3□□□□□ -0.76
XRN1-208ENST00000470537 TOP1MTQ969P6 601 aa10.3□□□□□ -0.76
XRN1-208ENST00000470537 C17orf80Q9BSJ5 609 aa10.3□□□□□ -0.76
XRN1-208ENST00000470537 LMAN2LQ9H0V9 348 aa10.3□□□□□ -0.76
XRN1-208ENST00000470537 INCENPQ9NQS7 918 aa10.3□□□□□ -0.76
XRN1-208ENST00000470537 H3BQ06 376 aaPredicted RBP10.29□□□□□ -0.76
XRN1-208ENST00000470537 HAS3O00219 553 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 DHX16O60231 1041 aaKnown RBP10.29□□□□□ -0.76
XRN1-208ENST00000470537 NR3C2P08235 984 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 MMP16P51512 607 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 ZP2Q05996 745 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 MCMDC2Q4G0Z9 681 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 ASPRV1Q53RT3 343 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 PLEKHG4Q58EX7 1191 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 SPRED2Q7Z698 418 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 SERINC5Q86VE9 423 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 FBXO11Q86XK2 927 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 PI4K2BQ8TCG2 481 aa10.29□□□□□ -0.76
XRN1-208ENST00000470537 SYTL5Q8TDW5 730 aaPredicted RBP10.29□□□□□ -0.76
XRN1-208ENST00000470537 ATP6V0A1Q93050 837 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms