RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 ZHX2Q9Y6X8 837 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 CCDC69A6NI79 296 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 GOLGA8BA8MQT2 603 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 F5H6K3 240 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 ZBTB43O43298 467 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 PFKFB2O60825 505 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 CTDNEP1O95476 244 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 SNHG28P0DPA3 235 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 PDHBP11177 359 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 IREB2P48200 963 aaKnown RBP5.5□□□□□ -1.53
SF3B1-208ENST00000470268 KLRC3Q07444 240 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 SFSWAPQ12872 951 aaKnown RBP5.5□□□□□ -1.53
SF3B1-208ENST00000470268 SPP2Q13103 211 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 CCINQ13939 588 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 ZYXQ15942 572 aaKnown RBP5.5□□□□□ -1.53
SF3B1-208ENST00000470268 NBPF11Q86T75 865 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 CCDC83Q8IWF9 413 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 ANKRD13AQ8IZ07 590 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 SPICE1Q8N0Z3 855 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 TMTC2Q8N394 836 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 SMC1BQ8NDV3 1235 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 NUP133Q8WUM0 1156 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 GTF3C6Q969F1 213 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 FRMD6Q96NE9 622 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 PLVAPQ9BX97 442 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 CPVLQ9H3G5 476 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 KAT14Q9H8E8 782 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 GBA2Q9HCG7 927 aaPredicted RBP5.5□□□□□ -1.53
SF3B1-208ENST00000470268 ABI2Q9NYB9 513 aaPredicted RBP5.5□□□□□ -1.53
SF3B1-208ENST00000470268 MARK1Q9P0L2 795 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 TMEM63CQ9P1W3 806 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 PRR12Q9ULL5 1215 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 NAP1L2Q9ULW6 460 aaPredicted RBP5.5□□□□□ -1.53
SF3B1-208ENST00000470268 TMX2Q9Y320 296 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 AFG3L2Q9Y4W6 797 aa5.5□□□□□ -1.53
SF3B1-208ENST00000470268 DCDC2BA2VCK2 349 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 TRIM75PA6NK02 468 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 PLEKHA8P1O95397 391 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 NDUFB10O96000 172 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 GOLGA8HP0CJ92 632 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 ALAS2P22557 587 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 MCM2P49736 904 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 METAP2P50579 478 aaKnown RBP eCLIP5.49□□□□□ -1.53
SF3B1-208ENST00000470268 CUL4AQ13619 759 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 NTRK3Q16288 839 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 CCDC178Q5BJE1 867 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 PRRT3Q5FWE3 981 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 ZNF468Q5VIY5 522 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-208ENST00000470268 ARMC9Q7Z3E5 817 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 CATIPQ7Z7H3 387 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 FCHSD1Q86WN1 690 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 HSCBQ8IWL3 235 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 FANCBQ8NB91 859 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 PMEPA1Q969W9 287 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 NUP88Q99567 741 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-208ENST00000470268 DUSP9Q99956 384 aaKnown RBP5.49□□□□□ -1.53
SF3B1-208ENST00000470268 WDR18Q9BV38 432 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 ZFYVE28Q9HCC9 887 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 PICK1Q9NRD5 415 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 GINM1Q9NU53 330 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 PARP2Q9UGN5 583 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 MAD2L2Q9UI95 211 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 KLF15Q9UIH9 416 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 FOXD3Q9UJU5 478 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-208ENST00000470268 CSADQ9Y600 493 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 NID2Q14112 1375 aa5.49□□□□□ -1.53
SF3B1-208ENST00000470268 GOLGA8AA7E2F4 631 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 CYTH3O43739 400 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 JAK2O60674 1132 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 DDAH1O94760 285 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 ITGB7P26010 798 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 BACE1P56817 501 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 FKBP1BP68106 108 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 DAB2P98082 770 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 MRPL58Q14197 206 aaKnown RBP5.48□□□□□ -1.53
SF3B1-208ENST00000470268 GRM4Q14833 912 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 SLFN13Q68D06 897 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 TTBK2Q6IQ55 1244 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 KCTD1Q719H9 257 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 SAPCD2Q86UD0 394 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 SRBD1Q8N5C6 995 aaKnown RBP5.48□□□□□ -1.53
SF3B1-208ENST00000470268 C2orf69Q8N8R5 385 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 NSUN7Q8NE18 718 aaKnown RBP5.48□□□□□ -1.53
SF3B1-208ENST00000470268 GMCL1P1Q8NEA9 526 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 OPTNQ96CV9 577 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 ZSCAN31Q96LW9 406 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-208ENST00000470268 KIAA1683Q9H0B3 1180 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 VCPKMTQ9H867 229 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 SH2B1Q9NRF2 756 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-208ENST00000470268 IGSF5Q9NSI5 407 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 HCN2Q9UL51 889 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 OTOFQ9HC10 1997 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 FRMPD2Q68DX3 1309 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-208ENST00000470268 PHACTR2O75167 634 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 FDPSP14324 419 aaKnown RBP5.48□□□□□ -1.53
SF3B1-208ENST00000470268 SLC16A2P36021 539 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 RCAN1P53805 252 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 HMGCS2P54868 508 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 HUNKP57058 714 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 PPATQ06203 517 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms