RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 MYL3P08590 195 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 CAPN2P17655 700 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 TCF7P36402 384 aaPredicted RBP11.91□□□□□ -0.5
SMC1A-206ENST00000470241 NASPP49321 788 aaPredicted RBP11.91□□□□□ -0.5
SMC1A-206ENST00000470241 PURAQ00577 322 aaKnown RBP11.91□□□□□ -0.5
SMC1A-206ENST00000470241 CEBPZQ03701 1054 aaKnown RBP11.91□□□□□ -0.5
SMC1A-206ENST00000470241 DNM1Q05193 864 aaKnown RBP11.91□□□□□ -0.5
SMC1A-206ENST00000470241 PPP2R5CQ13362 524 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 DGKDQ16760 1214 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 BRDTQ58F21 947 aaPredicted RBP11.91□□□□□ -0.5
SMC1A-206ENST00000470241 ABHD15Q6UXT9 468 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 ANKLE1Q8NAG6 615 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 PCSK9Q8NBP7 692 aaKnown RBP11.91□□□□□ -0.5
SMC1A-206ENST00000470241 ZNF396Q96N95 335 aaPredicted RBP11.91□□□□□ -0.5
SMC1A-206ENST00000470241 PCYT2Q99447 389 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 TTC12Q9H892 705 aaPredicted RBP11.91□□□□□ -0.5
SMC1A-206ENST00000470241 POLR3EQ9NVU0 708 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 TFIP11Q9UBB9 837 aaKnown RBP11.91□□□□□ -0.5
SMC1A-206ENST00000470241 PCDHA12Q9UN75 941 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 PHF24Q9UPV7 400 aa11.91□□□□□ -0.5
SMC1A-206ENST00000470241 IGKV6D-21A0A0A0MT36 114 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 MOXD2PA6NHM9 499 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 WDR64B1ANS9 1081 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 KBTBD13C9JR72 458 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 ZEB2O60315 1214 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 KPNA6O60684 536 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 LGR5O75473 907 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 LGALS2P05162 132 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 SUPT20HL2P0C7V6 817 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 ZNF286BP0CG31 522 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 COL6A1P12109 1028 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 PRPHP41219 470 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 FXR2P51116 673 aaKnown RBP eCLIP11.9□□□□□ -0.57e-7■■■■□ 20.7
SMC1A-206ENST00000470241 ACLYP53396 1101 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 SOX10P56693 466 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 UTP14CQ5TAP6 766 aaKnown RBP11.9□□□□□ -0.5
SMC1A-206ENST00000470241 MIS18BP1Q6P0N0 1132 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 CXCL17Q6UXB2 119 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 TRIM50Q86XT4 487 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 SMAP1Q8IYB5 467 aaPredicted RBP11.9□□□□□ -0.5
SMC1A-206ENST00000470241 RDM1Q8NG50 284 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 DIS3LQ8TF46 1054 aaKnown RBP11.9□□□□□ -0.5
SMC1A-206ENST00000470241 KAT2BQ92831 832 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 C16orf70Q9BSU1 422 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 DISC1Q9NRI5 854 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 CHMP5Q9NZZ3 219 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 CEP131Q9UPN4 1083 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 PCDHA10Q9Y5I2 948 aa11.9□□□□□ -0.5
SMC1A-206ENST00000470241 MORC2Q9Y6X9 1032 aaPredicted RBP11.9□□□□□ -0.5
SMC1A-206ENST00000470241 CENPFP49454 3210 aa11.9□□□□□ -0.51
SMC1A-206ENST00000470241 A0A1W2PQ45 241 aaPredicted RBP11.89□□□□□ -0.51
SMC1A-206ENST00000470241 A0A1W2PQY0 241 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 POTEMA6NI47 508 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 F2P00734 622 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 SFNP31947 248 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 TECP42680 631 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 JAK3P52333 1124 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 GRIN1Q05586 938 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 SLC39A14Q15043 492 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 EPHA7Q15375 998 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 ARL6IP4Q66PJ3 421 aaKnown RBP11.89□□□□□ -0.51
SMC1A-206ENST00000470241 ATL3Q6DD88 541 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 NCAPH2Q6IBW4 605 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 DTHD1Q6ZMT9 781 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 MIER3Q7Z3K6 550 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 UBE2Q1Q7Z7E8 422 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 CCDC60Q8IWA6 550 aaPredicted RBP11.89□□□□□ -0.51
SMC1A-206ENST00000470241 LINC00301Q8NCQ3 95 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 FERMT2Q96AC1 680 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 MTG1Q9BT17 334 aaPredicted RBP11.89□□□□□ -0.51
SMC1A-206ENST00000470241 TCEAL9Q9UHQ7 104 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 ATP6V1DQ9Y5K8 247 aa11.89□□□□□ -0.51
SMC1A-206ENST00000470241 EMSYQ7Z589 1322 aa11.88□□□□□ -0.51
SMC1A-206ENST00000470241 HAS3O00219 553 aa11.88□□□□□ -0.51
SMC1A-206ENST00000470241 CABYRO75952 493 aa11.88□□□□□ -0.51
SMC1A-206ENST00000470241 YEATS4O95619 227 aa11.88□□□□□ -0.51
SMC1A-206ENST00000470241 PSAPP07602 524 aa11.88□□□□□ -0.51
SMC1A-206ENST00000470241 MARCKSP29966 332 aaPredicted RBP11.88□□□□□ -0.51
SMC1A-206ENST00000470241 PSMC6P62333 389 aa11.88□□□□□ -0.51
SMC1A-206ENST00000470241 STK38Q15208 465 aa11.88□□□□□ -0.51
SMC1A-206ENST00000470241 SWSAP1Q6NVH7 229 aa11.88□□□□□ -0.51
SMC1A-206ENST00000470241 IGSF22Q8N9C0 903 aa11.88□□□□□ -0.51
SMC1A-206ENST00000470241 AFAP1L1Q8TED9 768 aa11.88□□□□□ -0.51
SMC1A-206ENST00000470241 PAWRQ96IZ0 340 aaKnown RBP11.88□□□□□ -0.51
SMC1A-206ENST00000470241 ZNF302Q9NR11 478 aa11.88□□□□□ -0.51
SMC1A-206ENST00000470241 GABBR1Q9UBS5 961 aa11.88□□□□□ -0.51
SMC1A-206ENST00000470241 FBXO2Q9UK22 296 aaPredicted RBP11.88□□□□□ -0.51
SMC1A-206ENST00000470241 SAMM50Q9Y512 469 aa11.88□□□□□ -0.51
SMC1A-206ENST00000470241 FRMPD3Q5JV73 1810 aa11.88□□□□□ -0.51
SMC1A-206ENST00000470241 GRIN2DO15399 1336 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 BRCA2P51587 3418 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 VWA3AA6NCI4 1184 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 PP2D1A8MPX8 630 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 H3BRB1 525 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 BACH1O14867 736 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 PPP6R2O75170 966 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 ATP4AP20648 1035 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 PSEN2P49810 448 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 STAT5BP51692 787 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 KRT85P78386 507 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms