RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 AMY2BP19961 511 aa5.8□□□□□ -1.48
BRCA2-202ENST00000470094 IGFALSP35858 605 aa5.8□□□□□ -1.48
BRCA2-202ENST00000470094 JAM2P57087 298 aa5.8□□□□□ -1.48
BRCA2-202ENST00000470094 LACTBP83111 547 aaPredicted RBP5.8□□□□□ -1.48
BRCA2-202ENST00000470094 VASNQ6EMK4 673 aa5.8□□□□□ -1.48
BRCA2-202ENST00000470094 DDX53Q86TM3 631 aaKnown RBP5.8□□□□□ -1.48
BRCA2-202ENST00000470094 IGSF22Q8N9C0 903 aa5.8□□□□□ -1.48
BRCA2-202ENST00000470094 ZNF526Q8TF50 670 aaPredicted RBP5.8□□□□□ -1.48
BRCA2-202ENST00000470094 TMEM209Q96SK2 561 aa5.8□□□□□ -1.48
BRCA2-202ENST00000470094 PDGFDQ9GZP0 370 aaPredicted RBP5.8□□□□□ -1.48
BRCA2-202ENST00000470094 NTMQ9P121 344 aa5.8□□□□□ -1.48
BRCA2-202ENST00000470094 SH3D21A4FU49 640 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 RFPL3O75679 317 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 DNAJC8O75937 253 aaPredicted RBP5.79□□□□□ -1.48
BRCA2-202ENST00000470094 PTPN1P18031 435 aaKnown RBP5.79□□□□□ -1.48
BRCA2-202ENST00000470094 BMP7P18075 431 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 GJA4P35212 333 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 THBS2P35442 1172 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 PABPC4Q13310 644 aaKnown RBP eCLIP5.79□□□□□ -1.48
BRCA2-202ENST00000470094 BTBD8Q5XKL5 378 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 TMC5Q6UXY8 1006 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 LIPIQ6XZB0 460 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 SPOCD1Q6ZMY3 1216 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 SP8Q8IXZ3 490 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 ADGRG2Q8IZP9 1017 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 CLIC6Q96NY7 704 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 WRNIP1Q96S55 665 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 SMURF1Q9HCE7 757 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 RIC8BQ9NVN3 520 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 CD2APQ9Y5K6 639 aa5.79□□□□□ -1.48
BRCA2-202ENST00000470094 A0A1B0GTL3 188 aa5.78□□□□□ -1.48
BRCA2-202ENST00000470094 TRIM13O60858 407 aa5.78□□□□□ -1.48
BRCA2-202ENST00000470094 CYP7B1O75881 506 aa5.78□□□□□ -1.48
BRCA2-202ENST00000470094 FLT3P36888 993 aa5.78□□□□□ -1.48
BRCA2-202ENST00000470094 DLX2Q07687 328 aaPredicted RBP5.78□□□□□ -1.48
BRCA2-202ENST00000470094 ADAM9Q13443 819 aa5.78□□□□□ -1.48
BRCA2-202ENST00000470094 TMEM177Q53S58 311 aa5.78□□□□□ -1.48
BRCA2-202ENST00000470094 ZCCHC8Q6NZY4 707 aaKnown RBP5.78□□□□□ -1.48
BRCA2-202ENST00000470094 ABHD17CQ6PCB6 329 aa5.78□□□□□ -1.48
BRCA2-202ENST00000470094 HHIPL2Q6UWX4 724 aa5.78□□□□□ -1.48
BRCA2-202ENST00000470094 TP53I13Q8NBR0 393 aaPredicted RBP5.78□□□□□ -1.48
BRCA2-202ENST00000470094 ZSWIM3Q96MP5 696 aa5.78□□□□□ -1.48
BRCA2-202ENST00000470094 SPATA6Q9NWH7 488 aaPredicted RBP5.78□□□□□ -1.48
BRCA2-202ENST00000470094 MAGEC2Q9UBF1 373 aaPredicted RBP5.78□□□□□ -1.48
BRCA2-202ENST00000470094 TNPO3Q9Y5L0 923 aaKnown RBP5.78□□□□□ -1.48
BRCA2-202ENST00000470094 ACOT7O00154 380 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 KCNK3O14649 394 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 CLASP2O75122 1294 aaKnown RBP5.77□□□□□ -1.49
BRCA2-202ENST00000470094 SASH1O94885 1247 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 KCNA6P17658 529 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 SDSP20132 328 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 RPL13P26373 211 aaKnown RBP5.77□□□□□ -1.49
BRCA2-202ENST00000470094 SARSP49591 514 aaKnown RBP5.77□□□□□ -1.49
BRCA2-202ENST00000470094 SLURP1P55000 103 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 TKFCQ3LXA3 575 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 CD276Q5ZPR3 534 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 OVCH1Q7RTY7 1134 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 CARFQ8N187 725 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 C2orf69Q8N8R5 385 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 MARCH10Q8NA82 808 aaPredicted RBP5.77□□□□□ -1.49
BRCA2-202ENST00000470094 FEZ1Q99689 392 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 ZCCHC4Q9H5U6 513 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 LUC7LQ9NQ29 371 aaKnown RBP5.77□□□□□ -1.49
BRCA2-202ENST00000470094 SAMD15Q9P1V8 674 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 RBPJLQ9UBG7 517 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 CROTQ9UKG9 612 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 TMA7Q9Y2S6 64 aaKnown RBP5.77□□□□□ -1.49
BRCA2-202ENST00000470094 TBX22Q9Y458 520 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 ADAMTS20P59510 1910 aa5.77□□□□□ -1.49
BRCA2-202ENST00000470094 SLC12A8A0AV02 714 aa5.76□□□□□ -1.49
BRCA2-202ENST00000470094 PRAMEF25A6NGN4 478 aa5.76□□□□□ -1.49
BRCA2-202ENST00000470094 FAM90A27PA6NNH2 459 aa5.76□□□□□ -1.49
BRCA2-202ENST00000470094 M0R2C6 588 aa5.76□□□□□ -1.49
BRCA2-202ENST00000470094 ENPP3O14638 875 aa5.76□□□□□ -1.49
BRCA2-202ENST00000470094 ENO2P09104 434 aaPredicted RBP5.76□□□□□ -1.49
BRCA2-202ENST00000470094 KCNC1P48547 511 aa5.76□□□□□ -1.49
BRCA2-202ENST00000470094 ZNF460Q14592 562 aa5.76□□□□□ -1.49
BRCA2-202ENST00000470094 C21orf62-AS1Q17RA5 79 aa5.76□□□□□ -1.49
BRCA2-202ENST00000470094 UBE2R2Q712K3 238 aaPredicted RBP5.76□□□□□ -1.49
BRCA2-202ENST00000470094 PROSER1Q86XN7 944 aa5.76□□□□□ -1.49
BRCA2-202ENST00000470094 SPATA25Q9BR10 227 aa5.76□□□□□ -1.49
BRCA2-202ENST00000470094 DLL4Q9NR61 685 aa5.76□□□□□ -1.49
BRCA2-202ENST00000470094 INTS7Q9NVH2 962 aaKnown RBP5.76□□□□□ -1.49
BRCA2-202ENST00000470094 WASF3Q9UPY6 502 aa5.76□□□□□ -1.49
BRCA2-202ENST00000470094 TLDC2A0PJX2 215 aa5.75□□□□□ -1.49
BRCA2-202ENST00000470094 SCDO00767 359 aa5.75□□□□□ -1.49
BRCA2-202ENST00000470094 HIP1RO75146 1068 aa5.75□□□□□ -1.49
BRCA2-202ENST00000470094 GLRX3O76003 335 aaKnown RBP5.75□□□□□ -1.49
BRCA2-202ENST00000470094 JMJD7P0C870 316 aa5.75□□□□□ -1.49
BRCA2-202ENST00000470094 SKIDA1Q1XH10 827 aa5.75□□□□□ -1.49
BRCA2-202ENST00000470094 PIK3R6Q5UE93 754 aa5.75□□□□□ -1.49
BRCA2-202ENST00000470094 PRAMEF18Q5VWM3 479 aa5.75□□□□□ -1.49
BRCA2-202ENST00000470094 CPZQ66K79 652 aa5.75□□□□□ -1.49
BRCA2-202ENST00000470094 NOSTRINQ8IVI9 506 aa5.75□□□□□ -1.49
BRCA2-202ENST00000470094 DTX3Q8N9I9 347 aa5.75□□□□□ -1.49
BRCA2-202ENST00000470094 NINJ1Q92982 152 aa5.75□□□□□ -1.49
BRCA2-202ENST00000470094 KCNC2Q96PR1 638 aa5.75□□□□□ -1.49
BRCA2-202ENST00000470094 CABP5Q9NP86 173 aa5.75□□□□□ -1.49
BRCA2-202ENST00000470094 PARD6AQ9NPB6 346 aa5.75□□□□□ -1.49
BRCA2-202ENST00000470094 ARHGAP28Q9P2N2 729 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms