RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 ATP8B4Q8TF62 1192 aa14.03□□□□□ -0.16
LSM2-209ENST00000470083 POF1BQ8WVV4 589 aa14.03□□□□□ -0.16
LSM2-209ENST00000470083 TPRP12270 2363 aaKnown RBP14.03□□□□□ -0.16
LSM2-209ENST00000470083 FSD2A1L4K1 749 aa14.02□□□□□ -0.17
LSM2-209ENST00000470083 ENPP3O14638 875 aa14.02□□□□□ -0.17
LSM2-209ENST00000470083 SORBS3O60504 671 aa14.02□□□□□ -0.17
LSM2-209ENST00000470083 LGALS2P05162 132 aa14.02□□□□□ -0.17
LSM2-209ENST00000470083 HSPD1P10809 573 aaKnown RBP14.02□□□□□ -0.17
LSM2-209ENST00000470083 GHRP10912 638 aa14.02□□□□□ -0.17
LSM2-209ENST00000470083 UBA1P22314 1058 aaKnown RBP14.02□□□□□ -0.17
LSM2-209ENST00000470083 CDC37Q16543 378 aaPredicted RBP14.02□□□□□ -0.17
LSM2-209ENST00000470083 ZMYM1Q5SVZ6 1142 aa14.02□□□□□ -0.17
LSM2-209ENST00000470083 UBALD2Q8IYN6 164 aa14.02□□□□□ -0.17
LSM2-209ENST00000470083 CMTR2Q8IYT2 770 aaKnown RBP14.02□□□□□ -0.17
LSM2-209ENST00000470083 KREMEN2Q8NCW0 462 aa14.02□□□□□ -0.17
LSM2-209ENST00000470083 TLE6Q9H808 572 aa14.02□□□□□ -0.17
LSM2-209ENST00000470083 EHMT1Q9H9B1 1298 aa14.02□□□□□ -0.17
LSM2-209ENST00000470083 CCDC171Q6TFL3 1326 aa14.01□□□□□ -0.17
LSM2-209ENST00000470083 CHRNA1P02708 482 aa14.01□□□□□ -0.17
LSM2-209ENST00000470083 TGFB3P10600 412 aa14.01□□□□□ -0.17
LSM2-209ENST00000470083 ADAM17P78536 824 aa14.01□□□□□ -0.17
LSM2-209ENST00000470083 MTMR3Q13615 1198 aa14.01□□□□□ -0.17
LSM2-209ENST00000470083 VN1R2Q8NFZ6 395 aa14.01□□□□□ -0.17
LSM2-209ENST00000470083 TTC14Q96N46 770 aa14.01□□□□□ -0.17
LSM2-209ENST00000470083 NEK1Q96PY6 1258 aa14.01□□□□□ -0.17
LSM2-209ENST00000470083 CDCA3Q99618 268 aaPredicted RBP14.01□□□□□ -0.17
LSM2-209ENST00000470083 TOMM22Q9NS69 142 aa14.01□□□□□ -0.17
LSM2-209ENST00000470083 SETD4Q9NVD3 440 aa14.01□□□□□ -0.17
LSM2-209ENST00000470083 MRPL11Q9Y3B7 192 aaKnown RBP14.01□□□□□ -0.17
LSM2-209ENST00000470083 PCDHGC5Q9Y5F6 944 aa14.01□□□□□ -0.17
LSM2-209ENST00000470083 ZFHX4Q86UP3 3567 aa14.01□□□□□ -0.17
LSM2-209ENST00000470083 RBM10P98175 930 aaKnown RBP14□□□□□ -0.17
LSM2-209ENST00000470083 SP2Q02086 613 aa14□□□□□ -0.17
LSM2-209ENST00000470083 LPIN1Q14693 890 aa14□□□□□ -0.17
LSM2-209ENST00000470083 ASTLQ6HA08 431 aaPredicted RBP14□□□□□ -0.17
LSM2-209ENST00000470083 DGLUCYQ7Z3D6 616 aa14□□□□□ -0.17
LSM2-209ENST00000470083 PDCD2LQ9BRP1 358 aa14□□□□□ -0.17
LSM2-209ENST00000470083 USP26Q9BXU7 913 aa14□□□□□ -0.17
LSM2-209ENST00000470083 UBA5Q9GZZ9 404 aa14□□□□□ -0.17
LSM2-209ENST00000470083 CPVLQ9H3G5 476 aa14□□□□□ -0.17
LSM2-209ENST00000470083 MLXIPQ9HAP2 919 aa14□□□□□ -0.17
LSM2-209ENST00000470083 DDX19BQ9UMR2 479 aa14□□□□□ -0.17
LSM2-209ENST00000470083 SORCS3Q9UPU3 1222 aa14□□□□□ -0.17
LSM2-209ENST00000470083 PER2O15055 1255 aa13.99□□□□□ -0.17
LSM2-209ENST00000470083 KRT37O76014 449 aa13.99□□□□□ -0.17
LSM2-209ENST00000470083 BRD1O95696 1058 aa13.99□□□□□ -0.17
LSM2-209ENST00000470083 GOLGA8HP0CJ92 632 aa13.99□□□□□ -0.17
LSM2-209ENST00000470083 DUSP6Q16828 381 aa13.99□□□□□ -0.17
LSM2-209ENST00000470083 RRP12Q5JTH9 1297 aaKnown RBP13.99□□□□□ -0.17
LSM2-209ENST00000470083 CRIPAKQ8N1N5 446 aa13.99□□□□□ -0.17
LSM2-209ENST00000470083 LMBR1Q8WVP7 490 aa13.99□□□□□ -0.17
LSM2-209ENST00000470083 RMDN1Q96DB5 314 aa13.99□□□□□ -0.17
LSM2-209ENST00000470083 S1PR5Q9H228 398 aa13.99□□□□□ -0.17
LSM2-209ENST00000470083 CACNA1GO43497 2377 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 KIAA1217Q5T5P2 1943 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 NOP56O00567 594 aaKnown RBP13.98□□□□□ -0.17
LSM2-209ENST00000470083 CFBP00751 764 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 SRGAP2BP0DMP2 458 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 MS4A1P11836 297 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 MYCLP12524 364 aaPredicted RBP13.98□□□□□ -0.17
LSM2-209ENST00000470083 HSD17B4P51659 736 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 CLCN5P51795 746 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 ARHGAP4P98171 946 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 GHRHRQ02643 423 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 UBE3AQ05086 875 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 MGAT3Q09327 533 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 QRICH1Q2TAL8 776 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 TAF2Q6P1X5 1199 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 TMEM184AQ6ZMB5 413 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 VSIG10LQ86VR7 867 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 NPAS4Q8IUM7 802 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 LINC01599Q8WXQ3 324 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 ZNF215Q9UL58 517 aaPredicted RBP13.98□□□□□ -0.17
LSM2-209ENST00000470083 NR2E1Q9Y466 385 aa13.98□□□□□ -0.17
LSM2-209ENST00000470083 KMT2BQ9UMN6 2715 aaPredicted RBP13.98□□□□□ -0.17
LSM2-209ENST00000470083 NRCAMQ92823 1304 aa13.97□□□□□ -0.17
LSM2-209ENST00000470083 TTC3P53804 2025 aa13.97□□□□□ -0.17
LSM2-209ENST00000470083 ACACBO00763 2458 aa13.97□□□□□ -0.17
LSM2-209ENST00000470083 SP100P23497 879 aaPredicted RBP13.97□□□□□ -0.17
LSM2-209ENST00000470083 KCNC3Q14003 757 aa13.97□□□□□ -0.17
LSM2-209ENST00000470083 ALX1Q15699 326 aa13.97□□□□□ -0.17
LSM2-209ENST00000470083 PAN2Q504Q3 1202 aaKnown RBP13.97□□□□□ -0.17
LSM2-209ENST00000470083 FBXO47Q5MNV8 452 aa13.97□□□□□ -0.17
LSM2-209ENST00000470083 VPS53Q5VIR6 699 aa13.97□□□□□ -0.17
LSM2-209ENST00000470083 ANKRD54Q6NXT1 300 aa13.97□□□□□ -0.17
LSM2-209ENST00000470083 TSHZ1Q6ZSZ6 1077 aa13.97□□□□□ -0.17
LSM2-209ENST00000470083 STOX1Q6ZVD7 989 aa13.97□□□□□ -0.17
LSM2-209ENST00000470083 TRIM50Q86XT4 487 aa13.97□□□□□ -0.17
LSM2-209ENST00000470083 ADGRF4Q8IZF3 695 aa13.97□□□□□ -0.17
LSM2-209ENST00000470083 IL31RAQ8NI17 732 aa13.97□□□□□ -0.17
LSM2-209ENST00000470083 MICAL1Q8TDZ2 1067 aa13.97□□□□□ -0.17
LSM2-209ENST00000470083 GPKOWQ92917 476 aaPredicted RBP eCLIP13.97□□□□□ -0.17
LSM2-209ENST00000470083 FRYLO94915 3013 aa13.97□□□□□ -0.17
LSM2-209ENST00000470083 OPLAHO14841 1288 aa13.96□□□□□ -0.17
LSM2-209ENST00000470083 PGM5Q15124 567 aa13.96□□□□□ -0.17
LSM2-209ENST00000470083 PDE12Q6L8Q7 609 aaKnown RBP13.96□□□□□ -0.17
LSM2-209ENST00000470083 SYCE2Q6PIF2 218 aa13.96□□□□□ -0.17
LSM2-209ENST00000470083 METTL7BQ6UX53 244 aa13.96□□□□□ -0.17
LSM2-209ENST00000470083 RUFY4Q6ZNE9 571 aa13.96□□□□□ -0.17
LSM2-209ENST00000470083 RSPH3Q86UC2 560 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms