RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 FOXQ1Q9C009 403 aa4.33□□□□□ -1.72
CDHR3-206ENST00000468477 XPO4Q9C0E2 1151 aaKnown RBP4.33□□□□□ -1.72
CDHR3-206ENST00000468477 IFT22Q9H7X7 185 aa4.33□□□□□ -1.72
CDHR3-206ENST00000468477 RC3H2Q9HBD1 1191 aaKnown RBP4.33□□□□□ -1.72
CDHR3-206ENST00000468477 TCF7L1Q9HCS4 588 aa4.33□□□□□ -1.72
CDHR3-206ENST00000468477 BRMS1Q9HCU9 246 aa4.33□□□□□ -1.72
CDHR3-206ENST00000468477 TBC1D22BQ9NU19 505 aa4.33□□□□□ -1.72
CDHR3-206ENST00000468477 GPR52Q9Y2T5 361 aa4.33□□□□□ -1.72
CDHR3-206ENST00000468477 SNCAIPQ9Y6H5 919 aa4.33□□□□□ -1.72
CDHR3-206ENST00000468477 A0A1B0GVC2 190 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 SYNDIG1LA6NDD5 238 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 LRRC10BA6NIK2 292 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 M0R3H8 397 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 PLOD3O60568 738 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 KPNA6O60684 536 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 PAGE1O75459 146 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 DNAJC8O75937 253 aaPredicted RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 ARIH2O95376 493 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 MT-CO1P00395 513 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 CPP00450 1065 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 CD4P01730 458 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 TPM2P07951 284 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 CELA3AP09093 270 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 CD8BP10966 210 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 GYS1P13807 737 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 IDEP14735 1019 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 FUT4P22083 530 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 GRK6P43250 576 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 TNNT2P45379 298 aaPredicted RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 RECQLP46063 649 aaPredicted RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 CLCN7P51798 805 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 OXCT1P55809 520 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 RPS26P62854 115 aaKnown RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 MPP1Q00013 466 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 PFKPQ01813 784 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 MTA1Q13330 715 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 IKZF1Q13422 519 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 PKN1Q16512 942 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 SLC10A6Q3KNW5 377 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 ITPRIPL1Q6GPH6 555 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 CYB5RLQ6IPT4 315 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 RETSATQ6NUM9 610 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 HIBCHQ6NVY1 386 aaPredicted RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 ZNF449Q6P9G9 518 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 SLC23A3Q6PIS1 610 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 BNC2Q6ZN30 1099 aaPredicted RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 ZNF574Q6ZN55 896 aaPredicted RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 C4orf50Q6ZRC1 276 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 TTC6Q86TZ1 520 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 MYCT1Q8N699 235 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 ARL6IP6Q8N6S5 226 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 ZNF513Q8N8E2 541 aaPredicted RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 LSM14AQ8ND56 463 aaKnown RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 HDAC2Q92769 488 aaKnown RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 TRIM44Q96DX7 344 aaPredicted RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 COX4I2Q96KJ9 171 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 ZMAT2Q96NC0 199 aaKnown RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 BARD1Q99728 777 aaKnown RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 NUDT16L1Q9BRJ7 211 aaKnown RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 SLC26A6Q9BXS9 759 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 LRRC3Q9BY71 257 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 MRPL4Q9BYD3 311 aaKnown RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 MTFR1LQ9H019 292 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 ZCCHC17Q9NP64 241 aaKnown RBP4.32□□□□□ -1.72
CDHR3-206ENST00000468477 HELLSQ9NRZ9 838 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 C1orf112Q9NSG2 853 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 ANKEF1Q9NU02 776 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 CACNA2D2Q9NY47 1150 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 ARHGAP28Q9P2N2 729 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 MAFFQ9ULX9 164 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 HDAC5Q9UQL6 1122 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 LRCH1Q9Y2L9 728 aa4.32□□□□□ -1.72
CDHR3-206ENST00000468477 TRBV23-1A0A0A0MS06 115 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 TRIM75PA6NK02 468 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 UPK3BL1B0FP48 263 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 C19orf81C9J6K1 198 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 UPK3BL2E5RIL1 263 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 CTNND1O60716 968 aaKnown RBP4.31□□□□□ -1.72
CDHR3-206ENST00000468477 PRKD3O94806 890 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 IL33O95760 270 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 APPP05067 770 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 KCNA2P16389 499 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 ITGB5P18084 799 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 RHCEP18577 417 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 HOXD12P35452 270 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 IARSP41252 1262 aaKnown RBP4.31□□□□□ -1.72
CDHR3-206ENST00000468477 USP14P54578 494 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 PLIN5Q00G26 463 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 RHDQ02161 417 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 PDE4BQ07343 736 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 PPP2R5CQ13362 524 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 PLCB4Q15147 1175 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 PCBP2Q15366 365 aaKnown RBP eCLIP4.31□□□□□ -1.72
CDHR3-206ENST00000468477 TERF2Q15554 542 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 NBPF8Q3BBV2 869 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 RILPL1Q5EBL4 403 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 CCDC158Q5M9N0 1113 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 SPATA1Q5VX52 437 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 IQSEC1Q6DN90 963 aa4.31□□□□□ -1.72
CDHR3-206ENST00000468477 ZCCHC8Q6NZY4 707 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms