RNA–Protein interactions for RNA: ENST00000468284.1

CKAP2-205, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 3

Gene CKAP2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-205ENST00000468284 SHROOM1Q2M3G4 852 aaPredicted RBP11.11□□□□□ -0.63
CKAP2-205ENST00000468284 PEAR1Q5VY43 1037 aaPredicted RBP11.11□□□□□ -0.63
CKAP2-205ENST00000468284 PLEKHH3Q7Z736 793 aa11.11□□□□□ -0.63
CKAP2-205ENST00000468284 GIMAP7Q8NHV1 300 aa11.11□□□□□ -0.63
CKAP2-205ENST00000468284 NPLOC4Q8TAT6 608 aa11.11□□□□□ -0.63
CKAP2-205ENST00000468284 WDR66Q8TBY9 1149 aa11.11□□□□□ -0.63
CKAP2-205ENST00000468284 EDC3Q96F86 508 aaKnown RBP11.11□□□□□ -0.63
CKAP2-205ENST00000468284 PAGR1Q9BTK6 254 aa11.11□□□□□ -0.63
CKAP2-205ENST00000468284 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.11□□□□□ -0.63
CKAP2-205ENST00000468284 ATAD5Q96QE3 1844 aa11.1□□□□□ -0.63
CKAP2-205ENST00000468284 LDHBP07195 334 aaKnown RBP11.1□□□□□ -0.63
CKAP2-205ENST00000468284 NBPF7P0C2Y1 421 aaPredicted RBP11.1□□□□□ -0.63
CKAP2-205ENST00000468284 MAPK4P31152 587 aa11.1□□□□□ -0.63
CKAP2-205ENST00000468284 ZEB1P37275 1124 aaPredicted RBP11.1□□□□□ -0.63
CKAP2-205ENST00000468284 ADCYAP1R1P41586 468 aa11.1□□□□□ -0.63
CKAP2-205ENST00000468284 IRX3P78415 501 aaPredicted RBP11.1□□□□□ -0.63
CKAP2-205ENST00000468284 TLE2Q04725 743 aa11.1□□□□□ -0.63
CKAP2-205ENST00000468284 PABPC4Q13310 644 aaKnown RBP eCLIP11.1□□□□□ -0.63
CKAP2-205ENST00000468284 AKNAD1Q5T1N1 836 aa11.1□□□□□ -0.63
CKAP2-205ENST00000468284 MYH13Q9UKX3 1938 aa11.09□□□□□ -0.63
CKAP2-205ENST00000468284 CNMDO75829 334 aa11.09□□□□□ -0.63
CKAP2-205ENST00000468284 DLGAP3O95886 979 aa11.09□□□□□ -0.63
CKAP2-205ENST00000468284 CAP2P40123 477 aa11.09□□□□□ -0.63
CKAP2-205ENST00000468284 GSTM4Q03013 218 aa11.09□□□□□ -0.63
CKAP2-205ENST00000468284 CALD1Q05682 793 aaKnown RBP11.09□□□□□ -0.63
CKAP2-205ENST00000468284 MFSD14CQ5VZR4 134 aa11.09□□□□□ -0.63
CKAP2-205ENST00000468284 GJD3Q8N144 294 aa11.09□□□□□ -0.63
CKAP2-205ENST00000468284 FBXL6Q8N531 539 aa11.09□□□□□ -0.63
CKAP2-205ENST00000468284 CHMP4AQ9BY43 222 aa11.09□□□□□ -0.63
CKAP2-205ENST00000468284 UTYO14607 1347 aa11.09□□□□□ -0.63
CKAP2-205ENST00000468284 PLXNA1Q9UIW2 1896 aa11.08□□□□□ -0.64
CKAP2-205ENST00000468284 IFIT1P09914 478 aaKnown RBP11.08□□□□□ -0.64
CKAP2-205ENST00000468284 CYBAP13498 195 aa11.08□□□□□ -0.64
CKAP2-205ENST00000468284 HOXA7P31268 230 aaPredicted RBP11.08□□□□□ -0.64
CKAP2-205ENST00000468284 TXKP42681 527 aa11.08□□□□□ -0.64
CKAP2-205ENST00000468284 TMEM31Q5JXX7 168 aa11.08□□□□□ -0.64
CKAP2-205ENST00000468284 EXOSC6Q5RKV6 272 aaKnown RBP11.08□□□□□ -0.64
CKAP2-205ENST00000468284 PRAMEF19Q5SWL8 479 aa11.08□□□□□ -0.64
CKAP2-205ENST00000468284 CCAR1Q8IX12 1150 aaKnown RBP11.08□□□□□ -0.64
CKAP2-205ENST00000468284 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.08□□□□□ -0.64
CKAP2-205ENST00000468284 OSBPL5Q9H0X9 879 aaPredicted RBP11.08□□□□□ -0.64
CKAP2-205ENST00000468284 BICC1Q9H694 974 aaKnown RBP11.08□□□□□ -0.64
CKAP2-205ENST00000468284 C9orf78Q9NZ63 289 aaPredicted RBP11.08□□□□□ -0.64
CKAP2-205ENST00000468284 GAKO14976 1311 aa11.08□□□□□ -0.64
CKAP2-205ENST00000468284 METTL12A8MUP2 240 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 ABL1P00519 1130 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 IGHA2P01877 340 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 F13BP05160 661 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 CLTBP09497 229 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 RAG1P15918 1043 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 BTDP43251 543 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 MRE11P49959 708 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 BACE1P56817 501 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 ATP2B2Q01814 1243 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 FPGSQ05932 587 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 RALBP1Q15311 655 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 PUM3Q15397 648 aaKnown RBP11.07□□□□□ -0.64
CKAP2-205ENST00000468284 WDR78Q5VTH9 848 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 PHLDB3Q6NSJ2 640 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 CCDC129Q6ZRS4 1044 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 C16orf59Q7L2K0 433 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 ANKRD44Q8N8A2 993 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 TACC3Q9Y6A5 838 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 MYH2Q9UKX2 1941 aa11.07□□□□□ -0.64
CKAP2-205ENST00000468284 FAM95CA0A1B0GW59 222 aa11.06□□□□□ -0.64
CKAP2-205ENST00000468284 KBTBD13C9JR72 458 aa11.06□□□□□ -0.64
CKAP2-205ENST00000468284 KIAA0355O15063 1070 aa11.06□□□□□ -0.64
CKAP2-205ENST00000468284 MSCO60682 206 aa11.06□□□□□ -0.64
CKAP2-205ENST00000468284 POLR3DP05423 398 aaPredicted RBP11.06□□□□□ -0.64
CKAP2-205ENST00000468284 DRD2P14416 443 aa11.06□□□□□ -0.64
CKAP2-205ENST00000468284 USP11P51784 963 aa11.06□□□□□ -0.64
CKAP2-205ENST00000468284 RHBDL3P58872 404 aa11.06□□□□□ -0.64
CKAP2-205ENST00000468284 NFKBIBQ15653 356 aa11.06□□□□□ -0.64
CKAP2-205ENST00000468284 SLC4A10Q6U841 1118 aa11.06□□□□□ -0.64
CKAP2-205ENST00000468284 ARRDC4Q8NCT1 418 aa11.06□□□□□ -0.64
CKAP2-205ENST00000468284 OSBPL1AQ9BXW6 950 aa11.06□□□□□ -0.64
CKAP2-205ENST00000468284 ANO2Q9NQ90 1003 aa11.06□□□□□ -0.64
CKAP2-205ENST00000468284 TMOD4Q9NZQ9 345 aa11.06□□□□□ -0.64
CKAP2-205ENST00000468284 KIF16BQ96L93 1317 aa11.06□□□□□ -0.64
CKAP2-205ENST00000468284 MYBBP1AQ9BQG0 1328 aaKnown RBP11.06□□□□□ -0.64
CKAP2-205ENST00000468284 EIF4EBP3O60516 100 aaPredicted RBP11.05□□□□□ -0.64
CKAP2-205ENST00000468284 PQBP1O60828 265 aaKnown RBP11.05□□□□□ -0.64
CKAP2-205ENST00000468284 VAMP4O75379 141 aa11.05□□□□□ -0.64
CKAP2-205ENST00000468284 ZNF211Q13398 564 aaPredicted RBP11.05□□□□□ -0.64
CKAP2-205ENST00000468284 LRRC41Q15345 812 aa11.05□□□□□ -0.64
CKAP2-205ENST00000468284 RABL6Q3YEC7 729 aaPredicted RBP11.05□□□□□ -0.64
CKAP2-205ENST00000468284 FAM47AQ5JRC9 791 aa11.05□□□□□ -0.64
CKAP2-205ENST00000468284 PAOXQ6QHF9 649 aa11.05□□□□□ -0.64
CKAP2-205ENST00000468284 ZNF384Q8TF68 577 aa11.05□□□□□ -0.64
CKAP2-205ENST00000468284 FBLIM1Q8WUP2 373 aa11.05□□□□□ -0.64
CKAP2-205ENST00000468284 WDR18Q9BV38 432 aa11.05□□□□□ -0.64
CKAP2-205ENST00000468284 CWC22Q9HCG8 908 aaKnown RBP11.05□□□□□ -0.64
CKAP2-205ENST00000468284 SALL1Q9NSC2 1324 aa11.05□□□□□ -0.64
CKAP2-205ENST00000468284 HOXC6P09630 235 aa11.04□□□□□ -0.64
CKAP2-205ENST00000468284 ACRP10323 421 aa11.04□□□□□ -0.64
CKAP2-205ENST00000468284 SLC5A1P13866 664 aa11.04□□□□□ -0.64
CKAP2-205ENST00000468284 PHKA1P46020 1223 aa11.04□□□□□ -0.64
CKAP2-205ENST00000468284 FAAP100Q0VG06 881 aa11.04□□□□□ -0.64
CKAP2-205ENST00000468284 CPSF6Q16630 551 aaKnown RBP eCLIP11.04□□□□□ -0.64
CKAP2-205ENST00000468284 CDPF1Q6NVV7 123 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms