RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 TELO2Q9Y4R8 837 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 PTPRFP10586 1907 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 A0A1B0GVL5 298 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 VWA3AA6NCI4 1184 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 PP2D1A8MPX8 630 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 B4DLN1 442 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 IPO5O00410 1097 aaKnown RBP6.72□□□□□ -1.33
USP39-213ENST00000467885 SLITRK3O94933 977 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 ARIH2O95376 493 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 GNRH1P01148 92 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 ZNF865P0CJ78 1059 aaPredicted RBP6.72□□□□□ -1.33
USP39-213ENST00000467885 SPATA31C1P0DKV0 1188 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 KCNA2P16389 499 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 LIG1P18858 919 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 HOXD10P28358 340 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 CYP2C19P33261 490 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 LONP1P36776 959 aaKnown RBP6.72□□□□□ -1.33
USP39-213ENST00000467885 RGS2P41220 211 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 UBE2HP62256 183 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 MDM2Q00987 491 aaPredicted RBP6.72□□□□□ -1.33
USP39-213ENST00000467885 PDE4DQ08499 809 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 IRF5Q13568 498 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 MTMR1Q13613 665 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 ACVR2BQ13705 512 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 ECM1Q16610 540 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 LY6KQ17RY6 165 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 RESP18Q5W5W9 173 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 SEPT14Q6ZU15 432 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 ARMCX2Q7L311 632 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 EEPD1Q7L9B9 569 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 NLRX1Q86UT6 975 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 SLFN12Q8IYM2 578 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 FMR1NBQ8N0W7 255 aaPredicted RBP6.72□□□□□ -1.33
USP39-213ENST00000467885 CD99L2Q8TCZ2 262 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 ZNF577Q9BSK1 485 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 CCSER1Q9C0I3 900 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 ABHD16BQ9H3Z7 469 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 GOLPH3LQ9H4A5 285 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 TBC1D22BQ9NU19 505 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 SLC5A4Q9NY91 659 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 SRRDQ9UH36 339 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 TSKSQ9UJT2 592 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 VAV3Q9UKW4 847 aa6.72□□□□□ -1.33
USP39-213ENST00000467885 A0A087WWV3 80 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 A0A087X0B3 334 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 GSTTP1A0A1W2PQM5 241 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 MARCH6O60337 910 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 STBD1O95210 358 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 CCNE2O96020 404 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 NDUFA8P51970 172 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 PRKCZQ05513 592 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 PPP2R5CQ13362 524 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 KIF22Q14807 665 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 EPHA7Q15375 998 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 CSPP1Q1MSJ5 1256 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 LONRF3Q496Y0 759 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 CELF3Q5SZQ8 465 aaKnown RBP6.71□□□□□ -1.34
USP39-213ENST00000467885 KCNV1Q6PIU1 500 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 ABHD15Q6UXT9 468 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 CATSPER3Q86XQ3 398 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 TRPV1Q8NER1 839 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 LRRC15Q8TF66 581 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 SOCS4Q8WXH5 440 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 ERO1AQ96HE7 468 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 AK8Q96MA6 479 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 PNMA5Q96PV4 448 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 UNC45AQ9H3U1 944 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 RYDENQ9NUL5 291 aaKnown RBP6.71□□□□□ -1.34
USP39-213ENST00000467885 LRWD1Q9UFC0 647 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 NFASCO94856 1347 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 SYNGAP1Q96PV0 1343 aa6.71□□□□□ -1.34
USP39-213ENST00000467885 IGKV6D-21A0A0A0MT36 114 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.7□□□□□ -1.34
USP39-213ENST00000467885 GOLGA6L22H0YM25 854 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 ZBTB39O15060 712 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 ADCY6O43306 1168 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 TRAK2O60296 914 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 MED24O75448 989 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 NR1I2O75469 434 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 ZNF202O95125 648 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 TXNP10599 105 aaKnown RBP6.7□□□□□ -1.34
USP39-213ENST00000467885 SMPD1P17405 629 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 PTGS1P23219 599 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 RPA1P27694 616 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 ADCYAP1R1P41586 468 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 PSMC6P62333 389 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 SETQ01105 290 aaPredicted RBP6.7□□□□□ -1.34
USP39-213ENST00000467885 CACNB2Q08289 660 aaPredicted RBP6.7□□□□□ -1.34
USP39-213ENST00000467885 TRIM32Q13049 653 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 GRB10Q13322 594 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 NEDD9Q14511 834 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 ARHGEF6Q15052 776 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 E2F4Q16254 413 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 CCDC144BQ3MJ40 725 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 GNPTABQ3T906 1256 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 DUSP28Q4G0W2 176 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 NAALADL2Q58DX5 795 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 HYIQ5T013 277 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 LRCH2Q5VUJ6 765 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 CYFIP1Q7L576 1253 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms