RNA–Protein interactions for RNA: ENST00000467438.1

LINC01140-202, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2 BASIC

Gene LINC01140, Length 2,375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-202ENST00000467438 KCTD10Q9H3F6 313 aa23.51■■□□□ 1.35
LINC01140-202ENST00000467438 EPB41L5Q9HCM4 733 aa23.51■■□□□ 1.35
LINC01140-202ENST00000467438 NHSQ6T4R5 1651 aa23.51■■□□□ 1.35
LINC01140-202ENST00000467438 SHMT1P34896 483 aa23.5■■□□□ 1.35
LINC01140-202ENST00000467438 EPHB4P54760 987 aa23.5■■□□□ 1.35
LINC01140-202ENST00000467438 GUCY2DQ02846 1103 aa23.5■■□□□ 1.35
LINC01140-202ENST00000467438 KIAA0753Q2KHM9 967 aa23.5■■□□□ 1.35
LINC01140-202ENST00000467438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.5■■□□□ 1.35
LINC01140-202ENST00000467438 SHOX2O60902 331 aaPredicted RBP23.5■■□□□ 1.35
LINC01140-202ENST00000467438 CYP11B2P19099 503 aa23.5■■□□□ 1.35
LINC01140-202ENST00000467438 GUCY2FP51841 1108 aa23.5■■□□□ 1.35
LINC01140-202ENST00000467438 ADAM9Q13443 819 aa23.5■■□□□ 1.35
LINC01140-202ENST00000467438 ZFPM1Q8IX07 1006 aa23.5■■□□□ 1.35
LINC01140-202ENST00000467438 KRT12Q99456 494 aa23.5■■□□□ 1.35
LINC01140-202ENST00000467438 P2RX7Q99572 595 aaKnown RBP23.5■■□□□ 1.35
LINC01140-202ENST00000467438 SH3GL2Q99962 352 aa23.5■■□□□ 1.35
LINC01140-202ENST00000467438 EMILIN3Q9NT22 766 aa23.5■■□□□ 1.35
LINC01140-202ENST00000467438 ZBTB5O15062 677 aa23.49■■□□□ 1.35
LINC01140-202ENST00000467438 SLC9A1P19634 815 aa23.49■■□□□ 1.35
LINC01140-202ENST00000467438 CCT5P48643 541 aa23.49■■□□□ 1.35
LINC01140-202ENST00000467438 PPARDQ03181 441 aa23.49■■□□□ 1.35
LINC01140-202ENST00000467438 NAB2Q15742 525 aa23.49■■□□□ 1.35
LINC01140-202ENST00000467438 CFAP221Q4G0U5 840 aa23.49■■□□□ 1.35
LINC01140-202ENST00000467438 CERS3Q8IU89 383 aa23.49■■□□□ 1.35
LINC01140-202ENST00000467438 TSPYL1Q9H0U9 437 aa23.49■■□□□ 1.35
LINC01140-202ENST00000467438 SERPINB13Q9UIV8 391 aa23.49■■□□□ 1.35
LINC01140-202ENST00000467438 HEXIM1O94992 359 aaKnown RBP23.49■■□□□ 1.35
LINC01140-202ENST00000467438 SLC20A2Q08357 652 aa23.49■■□□□ 1.35
LINC01140-202ENST00000467438 CRY2Q49AN0 593 aa23.49■■□□□ 1.35
LINC01140-202ENST00000467438 PLIN4Q96Q06 1357 aa23.49■■□□□ 1.35
LINC01140-202ENST00000467438 GRIN2DO15399 1336 aa23.48■■□□□ 1.35
LINC01140-202ENST00000467438 SERPINB2P05120 415 aa23.48■■□□□ 1.35
LINC01140-202ENST00000467438 KLHL30Q0D2K2 578 aa23.48■■□□□ 1.35
LINC01140-202ENST00000467438 KCNH2Q12809 1159 aa23.48■■□□□ 1.35
LINC01140-202ENST00000467438 SLC18A3Q16572 532 aa23.48■■□□□ 1.35
LINC01140-202ENST00000467438 RNF10Q8N5U6 811 aaKnown RBP23.48■■□□□ 1.35
LINC01140-202ENST00000467438 LRRC27Q9C0I9 530 aa23.48■■□□□ 1.35
LINC01140-202ENST00000467438 USP40Q9NVE5 1235 aa23.48■■□□□ 1.35
LINC01140-202ENST00000467438 MRPL12P52815 198 aaKnown RBP23.48■■□□□ 1.35
LINC01140-202ENST00000467438 GNGT1P63211 74 aa23.48■■□□□ 1.35
LINC01140-202ENST00000467438 NFIAQ12857 509 aa23.48■■□□□ 1.35
LINC01140-202ENST00000467438 CCDC43Q96MW1 224 aaKnown RBP23.48■■□□□ 1.35
LINC01140-202ENST00000467438 CAPS2Q9BXY5 557 aa23.48■■□□□ 1.35
LINC01140-202ENST00000467438 GANQ9H2C0 597 aa23.48■■□□□ 1.35
LINC01140-202ENST00000467438 BMP2KQ9NSY1 1161 aaPredicted RBP23.48■■□□□ 1.35
LINC01140-202ENST00000467438 ATF5Q9Y2D1 282 aaPredicted RBP23.48■■□□□ 1.35
LINC01140-202ENST00000467438 PCDHAC2Q9Y5I4 1007 aa23.48■■□□□ 1.35
LINC01140-202ENST00000467438 GRID2IPA4D2P6 1211 aa23.47■■□□□ 1.35
LINC01140-202ENST00000467438 KRT18P05783 430 aaKnown RBP23.47■■□□□ 1.35
LINC01140-202ENST00000467438 ATP1A2P50993 1020 aa23.47■■□□□ 1.35
LINC01140-202ENST00000467438 CACNB3P54284 484 aa23.47■■□□□ 1.35
LINC01140-202ENST00000467438 CCDC65Q8IXS2 484 aa23.47■■□□□ 1.35
LINC01140-202ENST00000467438 EDEM3Q9BZQ6 932 aa23.47■■□□□ 1.35
LINC01140-202ENST00000467438 PTK2Q05397 1052 aa23.47■■□□□ 1.35
LINC01140-202ENST00000467438 VPS72Q15906 364 aa23.47■■□□□ 1.35
LINC01140-202ENST00000467438 MEI1Q5TIA1 1274 aa23.47■■□□□ 1.35
LINC01140-202ENST00000467438 SLF2Q8IX21 1173 aa23.47■■□□□ 1.35
LINC01140-202ENST00000467438 KLHL7Q8IXQ5 586 aa23.47■■□□□ 1.35
LINC01140-202ENST00000467438 IKZF4Q9H2S9 585 aa23.47■■□□□ 1.35
LINC01140-202ENST00000467438 NR2F2P24468 414 aa23.46■■□□□ 1.35
LINC01140-202ENST00000467438 DOK7Q18PE1 504 aa23.46■■□□□ 1.35
LINC01140-202ENST00000467438 QRICH1Q2TAL8 776 aa23.46■■□□□ 1.35
LINC01140-202ENST00000467438 EMBQ6PCB8 327 aa23.46■■□□□ 1.35
LINC01140-202ENST00000467438 SLC30A10Q6XR72 485 aa23.46■■□□□ 1.35
LINC01140-202ENST00000467438 CASKIN2Q8WXE0 1202 aa23.46■■□□□ 1.35
LINC01140-202ENST00000467438 RBM17Q96I25 401 aaKnown RBP23.46■■□□□ 1.35
LINC01140-202ENST00000467438 ARFGEF1Q9Y6D6 1849 aa23.46■■□□□ 1.35
LINC01140-202ENST00000467438 GYS1P13807 737 aa23.45■■□□□ 1.35
LINC01140-202ENST00000467438 EPS15P42566 896 aa23.45■■□□□ 1.35
LINC01140-202ENST00000467438 CORO7P57737 925 aa23.45■■□□□ 1.35
LINC01140-202ENST00000467438 PPFIA1Q13136 1202 aa23.45■■□□□ 1.35
LINC01140-202ENST00000467438 PABPC4Q13310 644 aaKnown RBP eCLIP23.45■■□□□ 1.35
LINC01140-202ENST00000467438 HYIQ5T013 277 aa23.45■■□□□ 1.35
LINC01140-202ENST00000467438 CAVIN3Q969G5 261 aa23.45■■□□□ 1.35
LINC01140-202ENST00000467438 CEP63Q96MT8 703 aa23.45■■□□□ 1.35
LINC01140-202ENST00000467438 GDF3Q9NR23 364 aa23.45■■□□□ 1.35
LINC01140-202ENST00000467438 AJAP1Q9UKB5 411 aaPredicted RBP23.45■■□□□ 1.35
LINC01140-202ENST00000467438 HSF2BPO75031 334 aa23.45■■□□□ 1.34
LINC01140-202ENST00000467438 HOXD13P35453 343 aa23.45■■□□□ 1.34
LINC01140-202ENST00000467438 SLC12A3P55017 1021 aa23.45■■□□□ 1.34
LINC01140-202ENST00000467438 PDCLQ13371 301 aa23.45■■□□□ 1.34
LINC01140-202ENST00000467438 ASIC2Q16515 512 aa23.45■■□□□ 1.34
LINC01140-202ENST00000467438 ZNF571Q7Z3V5 609 aaPredicted RBP23.45■■□□□ 1.34
LINC01140-202ENST00000467438 PACS2Q86VP3 889 aa23.45■■□□□ 1.34
LINC01140-202ENST00000467438 CATSPER3Q86XQ3 398 aa23.45■■□□□ 1.34
LINC01140-202ENST00000467438 CERKQ8TCT0 537 aa23.45■■□□□ 1.34
LINC01140-202ENST00000467438 BCAS4Q8TDM0 211 aa23.45■■□□□ 1.34
LINC01140-202ENST00000467438 TBC1D22AQ8WUA7 517 aa23.45■■□□□ 1.34
LINC01140-202ENST00000467438 NT5C3AQ9H0P0 336 aa23.45■■□□□ 1.34
LINC01140-202ENST00000467438 SAMM50Q9Y512 469 aa23.45■■□□□ 1.34
LINC01140-202ENST00000467438 PCDHA1Q9Y5I3 950 aa23.45■■□□□ 1.34
LINC01140-202ENST00000467438 ZNF233A6NK53 670 aa23.44■■□□□ 1.34
LINC01140-202ENST00000467438 GOLGA8KD6RF30 607 aa23.44■■□□□ 1.34
LINC01140-202ENST00000467438 PIK3R5Q8WYR1 880 aa23.44■■□□□ 1.34
LINC01140-202ENST00000467438 SYN2Q92777 582 aaPredicted RBP23.44■■□□□ 1.34
LINC01140-202ENST00000467438 INPP4AQ96PE3 977 aaPredicted RBP23.44■■□□□ 1.34
LINC01140-202ENST00000467438 RUFY1Q96T51 708 aa23.44■■□□□ 1.34
LINC01140-202ENST00000467438 RSPH10B2B2RC85 870 aa23.44■■□□□ 1.34
LINC01140-202ENST00000467438 RSPH10BP0C881 870 aa23.44■■□□□ 1.34
LINC01140-202ENST00000467438 MYBP10242 640 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms