RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 RDM1Q8NG50 284 aa16.6■□□□□ 0.25
DDX56-208ENST00000467318 GPT2Q8TD30 523 aa16.6■□□□□ 0.25
DDX56-208ENST00000467318 CHAMP1Q96JM3 812 aa16.6■□□□□ 0.25
DDX56-208ENST00000467318 AP5M1Q9H0R1 490 aa16.6■□□□□ 0.25
DDX56-208ENST00000467318 SPC25Q9HBM1 224 aa16.6■□□□□ 0.25
DDX56-208ENST00000467318 VAV3Q9UKW4 847 aa16.6■□□□□ 0.25
DDX56-208ENST00000467318 VWA3AA6NCI4 1184 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 DDX39AO00148 427 aaKnown RBP16.59■□□□□ 0.25
DDX56-208ENST00000467318 NOP56O00567 594 aaKnown RBP16.59■□□□□ 0.25
DDX56-208ENST00000467318 DYNC1LI2O43237 492 aaPredicted RBP16.59■□□□□ 0.25
DDX56-208ENST00000467318 SPIRE1Q08AE8 756 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 BRDTQ58F21 947 aaPredicted RBP16.59■□□□□ 0.25
DDX56-208ENST00000467318 OR6J1Q8NGC5 347 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 PPTC7Q8NI37 304 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 COPS5Q92905 334 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 ZNF333Q96JL9 665 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 AK8Q96MA6 479 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 SPATA33Q96N06 139 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.59■□□□□ 0.259e-6■■□□□ 13.2
DDX56-208ENST00000467318 RRAGDQ9NQL2 400 aaPredicted RBP16.59■□□□□ 0.25
DDX56-208ENST00000467318 FBXO2Q9UK22 296 aaPredicted RBP16.59■□□□□ 0.25
DDX56-208ENST00000467318 STK24Q9Y6E0 443 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 ELP1O95163 1332 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 WDR64B1ANS9 1081 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 LONP1P36776 959 aaKnown RBP16.59■□□□□ 0.25
DDX56-208ENST00000467318 ME1P48163 572 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 JAK3P52333 1124 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 NKX3-2P78367 333 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 IL17AQ16552 155 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 HSDL1Q3SXM5 330 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 HS1BP3Q53T59 392 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 GJC2Q5T442 439 aaPredicted RBP16.59■□□□□ 0.25
DDX56-208ENST00000467318 TMEM87AQ8NBN3 555 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 SEPT1Q8WYJ6 367 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 LENG1Q96BZ8 264 aaPredicted RBP16.59■□□□□ 0.25
DDX56-208ENST00000467318 MCOLN1Q9GZU1 580 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 UNC45AQ9H3U1 944 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 BCAS3Q9H6U6 928 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 PAK6Q9NQU5 681 aaPredicted RBP16.59■□□□□ 0.25
DDX56-208ENST00000467318 PCDHA10Q9Y5I2 948 aa16.59■□□□□ 0.25
DDX56-208ENST00000467318 A6NJR5 290 aa16.58■□□□□ 0.24
DDX56-208ENST00000467318 LETM1O95202 739 aaPredicted RBP16.58■□□□□ 0.24
DDX56-208ENST00000467318 ATG7O95352 703 aa16.58■□□□□ 0.24
DDX56-208ENST00000467318 CPT1AP50416 773 aa16.58■□□□□ 0.24
DDX56-208ENST00000467318 GJA9P57773 515 aa16.58■□□□□ 0.24
DDX56-208ENST00000467318 ACTR2P61160 394 aa16.58■□□□□ 0.24
DDX56-208ENST00000467318 ZNF579Q8NAF0 562 aaKnown RBP16.58■□□□□ 0.24
DDX56-208ENST00000467318 RNF208Q9H0X6 261 aa16.58■□□□□ 0.24
DDX56-208ENST00000467318 UNC93B1Q9H1C4 597 aa16.58■□□□□ 0.24
DDX56-208ENST00000467318 XPNPEP3Q9NQH7 507 aa16.58■□□□□ 0.24
DDX56-208ENST00000467318 DISC1Q9NRI5 854 aa16.58■□□□□ 0.24
DDX56-208ENST00000467318 LRWD1Q9UFC0 647 aa16.58■□□□□ 0.24
DDX56-208ENST00000467318 SAMM50Q9Y512 469 aa16.58■□□□□ 0.24
DDX56-208ENST00000467318 ESPNB1AK53 854 aa16.57■□□□□ 0.24
DDX56-208ENST00000467318 CHMP2AO43633 222 aa16.57■□□□□ 0.24
DDX56-208ENST00000467318 SORBS3O60504 671 aa16.57■□□□□ 0.24
DDX56-208ENST00000467318 CUTAO60888 179 aa16.57■□□□□ 0.24
DDX56-208ENST00000467318 PPFIA4O75335 1185 aa16.57■□□□□ 0.24
DDX56-208ENST00000467318 CCNE2O96020 404 aa16.57■□□□□ 0.24
DDX56-208ENST00000467318 CCL5P13501 91 aa16.57■□□□□ 0.24
DDX56-208ENST00000467318 MTFR1Q15390 333 aa16.57■□□□□ 0.24
DDX56-208ENST00000467318 LHX8Q68G74 356 aa16.57■□□□□ 0.24
DDX56-208ENST00000467318 ADALQ6DHV7 355 aa16.57■□□□□ 0.24
DDX56-208ENST00000467318 MIER3Q7Z3K6 550 aa16.57■□□□□ 0.24
DDX56-208ENST00000467318 ERMNQ8TAM6 284 aa16.57■□□□□ 0.24
DDX56-208ENST00000467318 GPR20Q99678 358 aa16.57■□□□□ 0.24
DDX56-208ENST00000467318 UPF3AQ9H1J1 476 aaKnown RBP16.57■□□□□ 0.24
DDX56-208ENST00000467318 GDPD2Q9HCC8 539 aa16.57■□□□□ 0.24
DDX56-208ENST00000467318 PCDHA7Q9UN72 937 aa16.57■□□□□ 0.24
DDX56-208ENST00000467318 POTEMA6NI47 508 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 SP4Q02446 784 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 EPHA7Q15375 998 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 DGKDQ16760 1214 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 NCAPH2Q6IBW4 605 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 MIS18BP1Q6P0N0 1132 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 ABHD15Q6UXT9 468 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 AFG1LQ8WV93 481 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 SYNRGQ9UMZ2 1314 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 POTEFA5A3E0 1075 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 PSAPP07602 524 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 C6orf222P0C671 652 aaPredicted RBP16.56■□□□□ 0.24
DDX56-208ENST00000467318 HOXD8P13378 290 aaPredicted RBP16.56■□□□□ 0.24
DDX56-208ENST00000467318 FSCN1Q16658 493 aaKnown RBP16.56■□□□□ 0.24
DDX56-208ENST00000467318 AXDND1Q5T1B0 1012 aaPredicted RBP16.56■□□□□ 0.24
DDX56-208ENST00000467318 KRT79Q5XKE5 535 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 HAUS3Q68CZ6 603 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 NEK9Q8TD19 979 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 CLIC6Q96NY7 704 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 CSRNP2Q9H175 543 aa16.56■□□□□ 0.24
DDX56-208ENST00000467318 GSTTP1A0A1W2PQM5 241 aa16.55■□□□□ 0.24
DDX56-208ENST00000467318 EML1O00423 815 aa16.55■□□□□ 0.24
DDX56-208ENST00000467318 ZEB2O60315 1214 aa16.55■□□□□ 0.24
DDX56-208ENST00000467318 KPNA6O60684 536 aa16.55■□□□□ 0.24
DDX56-208ENST00000467318 ADAMTS4O75173 837 aa16.55■□□□□ 0.24
DDX56-208ENST00000467318 PGK1P00558 417 aa16.55■□□□□ 0.24
DDX56-208ENST00000467318 P4HBP07237 508 aaKnown RBP16.55■□□□□ 0.24
DDX56-208ENST00000467318 MMP3P08254 477 aa16.55■□□□□ 0.24
DDX56-208ENST00000467318 SUPT20HL2P0C7V6 817 aa16.55■□□□□ 0.24
DDX56-208ENST00000467318 CAPN2P17655 700 aa16.55■□□□□ 0.24
DDX56-208ENST00000467318 CST5P28325 142 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms