RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 MRPL46Q9H2W6 279 aaKnown RBP9.43□□□□□ -0.9
HPS4-209ENST00000466781 SLITRK6Q9H5Y7 841 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 KRT1P04264 644 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 PSAPP07602 524 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 MAPK4P31152 587 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 STAT2P52630 851 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 MYSM1Q5VVJ2 828 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 ADALQ6DHV7 355 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 CCDC124Q96CT7 223 aaKnown RBP9.43□□□□□ -0.9
HPS4-209ENST00000466781 FGD4Q96M96 766 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 PPP1R16BQ96T49 567 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 COPRSQ9NQ92 184 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 IQSEC2Q5JU85 1478 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 LAD1O00515 517 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 TTI1O43156 1089 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 H2AFZP0C0S5 128 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 NOP14P78316 857 aaKnown RBP9.43□□□□□ -0.9
HPS4-209ENST00000466781 PDCD2Q16342 344 aaPredicted RBP9.43□□□□□ -0.9
HPS4-209ENST00000466781 H2AFVQ71UI9 128 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 ALKBH8Q96BT7 664 aaKnown RBP9.43□□□□□ -0.9
HPS4-209ENST00000466781 CEP170P1Q96L14 293 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 WDR11Q9BZH6 1224 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 POLIQ9UNA4 740 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 BNIP3LO60238 219 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 OAS2P29728 719 aaKnown RBP9.43□□□□□ -0.9
HPS4-209ENST00000466781 CRKP46108 304 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 TFAMQ00059 246 aaKnown RBP9.43□□□□□ -0.9
HPS4-209ENST00000466781 MESDQ14696 234 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 UBE3CQ15386 1083 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 ARMCX2Q7L311 632 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 TTC30BQ8N4P2 665 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 C7orf31Q8N865 590 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 CDC26Q8NHZ8 85 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 EPS15L1Q9UBC2 864 aa9.43□□□□□ -0.9
HPS4-209ENST00000466781 POC1B-GALNT4F8VUJ3 575 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 MYO1FO00160 1098 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 PI16Q6UXB8 463 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 THEM5Q8N1Q8 247 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 KCTD6Q8NC69 237 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 TMEM206Q9H813 350 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 MED14O60244 1454 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 DPYSL4O14531 572 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 ARL13BQ3SXY8 428 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 RC3H1Q5TC82 1133 aaKnown RBP9.42□□□□□ -0.9
HPS4-209ENST00000466781 SYDE2Q5VT97 1194 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 TRIM42Q8IWZ5 723 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 ZNF341Q9BYN7 854 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 BAIAP2L1Q9UHR4 511 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 PALD1Q9ULE6 856 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 PCDHA4Q9UN74 947 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 MAP3K7O43318 606 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 SNAP25P60880 206 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 SURF1Q15526 300 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 ME3Q16798 604 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 RSBN1LQ6PCB5 846 aaPredicted RBP9.42□□□□□ -0.9
HPS4-209ENST00000466781 DARS2Q6PI48 645 aaKnown RBP9.42□□□□□ -0.9
HPS4-209ENST00000466781 SYMPKQ92797 1274 aaKnown RBP9.42□□□□□ -0.9
HPS4-209ENST00000466781 ZNF653Q96CK0 615 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 NUDCD1Q96RS6 583 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 SPZ1Q9BXG8 430 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 PI4KBQ9UBF8 816 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 FIS1Q9Y3D6 152 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 GOLGA8SH3BPF8 625 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 HSPD1P10809 573 aaKnown RBP9.42□□□□□ -0.9
HPS4-209ENST00000466781 GPSM2P81274 684 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 MTERF2Q49AM1 385 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 XPO4Q9C0E2 1151 aaKnown RBP9.42□□□□□ -0.9
HPS4-209ENST00000466781 ANTXR1Q9H6X2 564 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 RPF1Q9H9Y2 349 aaKnown RBP9.42□□□□□ -0.9
HPS4-209ENST00000466781 AFPP02771 609 aaKnown RBP9.42□□□□□ -0.9
HPS4-209ENST00000466781 MX2P20592 715 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 OR6B2Q6IFH4 312 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 TLK1Q9UKI8 766 aa9.42□□□□□ -0.9
HPS4-209ENST00000466781 SRRM1Q8IYB3 904 aaKnown RBP9.41□□□□□ -0.9
HPS4-209ENST00000466781 CNOT6LQ96LI5 555 aaKnown RBP9.41□□□□□ -0.9
HPS4-209ENST00000466781 TTC25Q96NG3 672 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 A0A0G2JLW4 131 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 EEF1GP26641 437 aaKnown RBP9.41□□□□□ -0.9
HPS4-209ENST00000466781 CHRNA5P30532 468 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 GNGT1P63211 74 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 GOLGA8FQ08AF8 430 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 GOLGA8DPQ0D2H9 430 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 DNAJC24Q6P3W2 148 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 UHMK1Q8TAS1 419 aaKnown RBP9.41□□□□□ -0.9
HPS4-209ENST00000466781 CXorf38Q8TB03 319 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 FBXO41Q8TF61 875 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 DEPDC1BQ8WUY9 529 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 TACO1Q9BSH4 297 aaKnown RBP9.41□□□□□ -0.9
HPS4-209ENST00000466781 CUEDC2Q9H467 287 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 PRKAB2O43741 272 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 DNAJC8O75937 253 aaPredicted RBP9.41□□□□□ -0.9
HPS4-209ENST00000466781 SETSIPP0DME0 302 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 SP8Q8IXZ3 490 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 SPATA31D1Q6ZQQ2 1576 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 ADCY9O60503 1353 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 TMEM247A6NEH6 219 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 GADD45BO75293 160 aaPredicted RBP9.41□□□□□ -0.9
HPS4-209ENST00000466781 GNAT1P11488 350 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 BMP3P12645 472 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 TCP1P17987 556 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms