RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 RIT2Q99578 217 aa10.76□□□□□ -0.69
SDCCAG3-208ENST00000466579 SDF4Q9BRK5 362 aa10.76□□□□□ -0.69
SDCCAG3-208ENST00000466579 TRPV6Q9H1D0 765 aa10.76□□□□□ -0.69
SDCCAG3-208ENST00000466579 TUT1Q9H6E5 874 aaKnown RBP10.76□□□□□ -0.69
SDCCAG3-208ENST00000466579 TBC1D22BQ9NU19 505 aa10.76□□□□□ -0.69
SDCCAG3-208ENST00000466579 TMEM39AQ9NV64 488 aa10.76□□□□□ -0.69
SDCCAG3-208ENST00000466579 PRKAG2Q9UGJ0 569 aa10.76□□□□□ -0.69
SDCCAG3-208ENST00000466579 GTF2IRD1Q9UHL9 959 aa10.76□□□□□ -0.69
SDCCAG3-208ENST00000466579 CCDC194A0A1B0GVG4 234 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 BTBD18B2RXH4 712 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 MSH4O15457 936 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 SORBS3O60504 671 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 GCFC2P16383 781 aaKnown RBP10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 TCF7P36402 384 aaPredicted RBP10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 ACTR2P61160 394 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 NR5A1Q13285 461 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 INF2Q27J81 1249 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 PRR16Q569H4 304 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 GDF6Q6KF10 455 aaPredicted RBP10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 MFSD5Q6N075 450 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 ZNF746Q6NUN9 644 aaPredicted RBP10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 B3GNT9Q6UX72 402 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 ABHD15Q6UXT9 468 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 NEK8Q86SG6 692 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 DIS3L2Q8IYB7 885 aaKnown RBP10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 ETNPPLQ8TBG4 499 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 C8orf76Q96K31 380 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 PCYT2Q99447 389 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 NAP1L4Q99733 375 aaKnown RBP10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 ZNF577Q9BSK1 485 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 NOC4LQ9BVI4 516 aaKnown RBP10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 BRMS1Q9HCU9 246 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 TRMT13Q9NUP7 481 aaKnown RBP10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 HDAC6Q9UBN7 1215 aa10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 COLQQ9Y215 455 aaPredicted RBP10.75□□□□□ -0.69
SDCCAG3-208ENST00000466579 TANC1Q9C0D5 1861 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 KAT6AQ92794 2004 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 PSMD10O75832 226 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 TDP2O95551 362 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 RAG1P15918 1043 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 ADAM17P78536 824 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 KRT76Q01546 638 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 TRIM29Q14134 588 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 HIC1Q14526 733 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 PIK3AP1Q6ZUJ8 805 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 PLPPR4Q7Z2D5 763 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 TRIM50Q86XT4 487 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 SMAP1Q8IYB5 467 aaPredicted RBP10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 C7orf31Q8N865 590 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 AFAP1L1Q8TED9 768 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 BADQ92934 168 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 FOXP1Q9H334 677 aaPredicted RBP10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 SMARCAD1Q9H4L7 1026 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 KCNMB3Q9NPA1 279 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 PRDM5Q9NQX1 630 aaPredicted RBP10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 ERAP1Q9NZ08 941 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 PKD2L1Q9P0L9 805 aa10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 ZNF215Q9UL58 517 aaPredicted RBP10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 MYH9P35579 1960 aaKnown RBP10.74□□□□□ -0.69
SDCCAG3-208ENST00000466579 FAM205CA6NFA0 338 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 PITPNM1O00562 1244 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 TBX3O15119 743 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 SLC37A4O43826 429 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 SMIM10L2AP0DMW4 78 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 SMIM10L2BP0DMW5 78 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 U2AF2P26368 475 aaKnown RBP eCLIP10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 SLC26A2P50443 739 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 MDM2Q00987 491 aaPredicted RBP10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 PTK7Q13308 1070 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 PTGISQ16647 500 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 TRIM71Q2Q1W2 868 aaKnown RBP10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 FAM47CQ5HY64 1035 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 FAM184AQ8NB25 1140 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 RDM1Q8NG50 284 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 SP7Q8TDD2 431 aaPredicted RBP10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 DHX38Q92620 1227 aaKnown RBP10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 SNX21Q969T3 373 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 FAM20AQ96MK3 541 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 LBHD1Q9BQE6 289 aaPredicted RBP10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 HIPK3Q9H422 1215 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 RNPEPQ9H4A4 650 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 DDX25Q9UHL0 483 aaKnown RBP10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 KIF3AQ9Y496 699 aa10.73□□□□□ -0.69
SDCCAG3-208ENST00000466579 MBLAC1A4D2B0 266 aaPredicted RBP10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 CYP2C9P11712 490 aa10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 SP4Q02446 784 aa10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 SAFBQ15424 915 aaKnown RBP eCLIP10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 LETM2Q2VYF4 491 aa10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 UTP14CQ5TAP6 766 aaKnown RBP10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 MIS18BP1Q6P0N0 1132 aa10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 SERINC5Q86VE9 423 aa10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 CAGE1Q8TC20 777 aa10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 PPP1R13LQ8WUF5 828 aa10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 HAS1Q92839 578 aa10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 VWCEQ96DN2 955 aa10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 TEKT3Q9BXF9 490 aa10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 WNT8AQ9H1J5 351 aa10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 PCDH10Q9P2E7 1040 aa10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.72□□□□□ -0.69
SDCCAG3-208ENST00000466579 PCDHA10Q9Y5I2 948 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms