RNA–Protein interactions for RNA: ENST00000466453.1

APP-214, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 374 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-214ENST00000466453 COL28A1Q2UY09 1125 aa9.32□□□□□ -0.92
APP-214ENST00000466453 RUFY4Q6ZNE9 571 aa9.32□□□□□ -0.92
APP-214ENST00000466453 OTOP3Q7RTS5 596 aa9.32□□□□□ -0.92
APP-214ENST00000466453 SCFD2Q8WU76 684 aa9.32□□□□□ -0.92
APP-214ENST00000466453 KIFC2Q96AC6 838 aa9.32□□□□□ -0.92
APP-214ENST00000466453 GPR20Q99678 358 aa9.32□□□□□ -0.92
APP-214ENST00000466453 LSM14BQ9BX40 385 aaKnown RBP9.32□□□□□ -0.92
APP-214ENST00000466453 FAM126AQ9BYI3 521 aaPredicted RBP9.32□□□□□ -0.92
APP-214ENST00000466453 FOXQ1Q9C009 403 aa9.32□□□□□ -0.92
APP-214ENST00000466453 KANSL2Q9H9L4 492 aa9.32□□□□□ -0.92
APP-214ENST00000466453 GREB1LQ9C091 1923 aaPredicted RBP9.32□□□□□ -0.92
APP-214ENST00000466453 URB1O60287 2271 aaKnown RBP9.31□□□□□ -0.92
APP-214ENST00000466453 HAS3O00219 553 aa9.31□□□□□ -0.92
APP-214ENST00000466453 PPFIA3O75145 1194 aa9.31□□□□□ -0.92
APP-214ENST00000466453 CAND2O75155 1236 aa9.31□□□□□ -0.92
APP-214ENST00000466453 SRFP11831 508 aa9.31□□□□□ -0.92
APP-214ENST00000466453 CYP7A1P22680 504 aa9.31□□□□□ -0.92
APP-214ENST00000466453 PSEN2P49810 448 aa9.31□□□□□ -0.92
APP-214ENST00000466453 ALDH5A1P51649 535 aaPredicted RBP9.31□□□□□ -0.92
APP-214ENST00000466453 HIC1Q14526 733 aa9.31□□□□□ -0.92
APP-214ENST00000466453 TKFCQ3LXA3 575 aa9.31□□□□□ -0.92
APP-214ENST00000466453 ATAT1Q5SQI0 421 aa9.31□□□□□ -0.92
APP-214ENST00000466453 RASGRP2Q7LDG7 609 aa9.31□□□□□ -0.92
APP-214ENST00000466453 PROSER1Q86XN7 944 aa9.31□□□□□ -0.92
APP-214ENST00000466453 MIGA1Q8NAN2 632 aa9.31□□□□□ -0.92
APP-214ENST00000466453 AFG1LQ8WV93 481 aa9.31□□□□□ -0.92
APP-214ENST00000466453 CCDC17Q96LX7 622 aa9.31□□□□□ -0.92
APP-214ENST00000466453 KATNAL1Q9BW62 490 aa9.31□□□□□ -0.92
APP-214ENST00000466453 SCNM1Q9BWG6 230 aa9.31□□□□□ -0.92
APP-214ENST00000466453 BCO2Q9BYV7 579 aa9.31□□□□□ -0.92
APP-214ENST00000466453 USP44Q9H0E7 712 aa9.31□□□□□ -0.92
APP-214ENST00000466453 PA2G4Q9UQ80 394 aaKnown RBP9.31□□□□□ -0.92
APP-214ENST00000466453 RAI2Q9Y5P3 530 aa9.31□□□□□ -0.92
APP-214ENST00000466453 HCFC2Q9Y5Z7 792 aa9.31□□□□□ -0.92
APP-214ENST00000466453 SHROOM3Q8TF72 1996 aa9.31□□□□□ -0.92
APP-214ENST00000466453 DOPEY2Q9Y3R5 2298 aa9.31□□□□□ -0.92
APP-214ENST00000466453 LOXHD1Q8IVV2 1947 aa9.31□□□□□ -0.92
APP-214ENST00000466453 C2orf16Q68DN1 1984 aa9.3□□□□□ -0.92
APP-214ENST00000466453 LRRK2Q5S007 2527 aa9.3□□□□□ -0.92
APP-214ENST00000466453 C1QL1O75973 258 aa9.3□□□□□ -0.92
APP-214ENST00000466453 TOP3BO95985 862 aaKnown RBP9.3□□□□□ -0.92
APP-214ENST00000466453 NDUFB10O96000 172 aa9.3□□□□□ -0.92
APP-214ENST00000466453 F2P00734 622 aa9.3□□□□□ -0.92
APP-214ENST00000466453 UQCRFS1P1P0C7P4 283 aa9.3□□□□□ -0.92
APP-214ENST00000466453 CASTP20810 708 aaKnown RBP9.3□□□□□ -0.92
APP-214ENST00000466453 MFSD10Q14728 455 aa9.3□□□□□ -0.92
APP-214ENST00000466453 NONOQ15233 471 aaKnown RBP eCLIP9.3□□□□□ -0.92
APP-214ENST00000466453 KIAA0753Q2KHM9 967 aa9.3□□□□□ -0.92
APP-214ENST00000466453 PLPP4Q5VZY2 271 aa9.3□□□□□ -0.92
APP-214ENST00000466453 CELF5Q8N6W0 485 aaKnown RBP9.3□□□□□ -0.92
APP-214ENST00000466453 GPR152Q8TDT2 470 aa9.3□□□□□ -0.92
APP-214ENST00000466453 ALG1Q9BT22 464 aa9.3□□□□□ -0.92
APP-214ENST00000466453 COPRSQ9NQ92 184 aa9.3□□□□□ -0.92
APP-214ENST00000466453 PRMT8Q9NR22 394 aaPredicted RBP9.3□□□□□ -0.92
APP-214ENST00000466453 AAASQ9NRG9 546 aa9.3□□□□□ -0.92
APP-214ENST00000466453 ADD3Q9UEY8 706 aaKnown RBP9.3□□□□□ -0.92
APP-214ENST00000466453 FBN2P35556 2912 aa9.3□□□□□ -0.92
APP-214ENST00000466453 MYH4Q9Y623 1939 aa9.29□□□□□ -0.92
APP-214ENST00000466453 ATMQ13315 3056 aa9.29□□□□□ -0.92
APP-214ENST00000466453 HIDE1A8MVS5 230 aa9.29□□□□□ -0.92
APP-214ENST00000466453 FGF18O76093 207 aa9.29□□□□□ -0.92
APP-214ENST00000466453 ARIH2O95376 493 aa9.29□□□□□ -0.92
APP-214ENST00000466453 CTSHP09668 335 aa9.29□□□□□ -0.92
APP-214ENST00000466453 FDX1P10109 184 aa9.29□□□□□ -0.92
APP-214ENST00000466453 TXNP10599 105 aaKnown RBP9.29□□□□□ -0.92
APP-214ENST00000466453 MAGEA9P43362 315 aa9.29□□□□□ -0.92
APP-214ENST00000466453 STARD6P59095 220 aa9.29□□□□□ -0.92
APP-214ENST00000466453 SRSF1Q07955 248 aaKnown RBP eCLIP9.29□□□□□ -0.92
APP-214ENST00000466453 ZNF252P-AS1Q0IIN9 211 aa9.29□□□□□ -0.92
APP-214ENST00000466453 AASDHQ4L235 1098 aaPredicted RBP9.29□□□□□ -0.92
APP-214ENST00000466453 RARS2Q5T160 578 aaKnown RBP9.29□□□□□ -0.92
APP-214ENST00000466453 GORABQ5T7V8 394 aa9.29□□□□□ -0.92
APP-214ENST00000466453 CCDC149Q6ZUS6 474 aa9.29□□□□□ -0.92
APP-214ENST00000466453 NEUROD6Q96NK8 337 aa9.29□□□□□ -0.92
APP-214ENST00000466453 TRERF1Q96PN7 1200 aa9.29□□□□□ -0.92
APP-214ENST00000466453 SNRKQ9NRH2 765 aa9.29□□□□□ -0.92
APP-214ENST00000466453 MCM9Q9NXL9 1143 aa9.29□□□□□ -0.92
APP-214ENST00000466453 PCDHB12Q9Y5F1 795 aa9.29□□□□□ -0.92
APP-214ENST00000466453 PCNX2A6NKB5 2137 aa9.29□□□□□ -0.92
APP-214ENST00000466453 FNDC1Q4ZHG4 1894 aaPredicted RBP9.28□□□□□ -0.92
APP-214ENST00000466453 F5H6K3 240 aa9.28□□□□□ -0.92
APP-214ENST00000466453 ENPP3O14638 875 aa9.28□□□□□ -0.92
APP-214ENST00000466453 PRB1P04280 392 aa9.28□□□□□ -0.92
APP-214ENST00000466453 NOVA1P51513 510 aaKnown RBP9.28□□□□□ -0.92
APP-214ENST00000466453 KLRC3Q07444 240 aa9.28□□□□□ -0.92
APP-214ENST00000466453 TFCP2Q12800 502 aa9.28□□□□□ -0.92
APP-214ENST00000466453 DGKDQ16760 1214 aa9.28□□□□□ -0.92
APP-214ENST00000466453 PAN2Q504Q3 1202 aaKnown RBP9.28□□□□□ -0.92
APP-214ENST00000466453 STPG1Q5TH74 334 aa9.28□□□□□ -0.92
APP-214ENST00000466453 DCLRE1AQ6PJP8 1040 aa9.28□□□□□ -0.92
APP-214ENST00000466453 TSSK4Q6SA08 328 aa9.28□□□□□ -0.92
APP-214ENST00000466453 DHX37Q8IY37 1157 aaKnown RBP9.28□□□□□ -0.92
APP-214ENST00000466453 DYNLL2Q96FJ2 89 aa9.28□□□□□ -0.92
APP-214ENST00000466453 TCF25Q9BQ70 676 aa9.28□□□□□ -0.92
APP-214ENST00000466453 MYL10Q9BUA6 226 aa9.28□□□□□ -0.92
APP-214ENST00000466453 NGRNQ9NPE2 291 aaKnown RBP9.28□□□□□ -0.92
APP-214ENST00000466453 FEM1BQ9UK73 627 aa9.28□□□□□ -0.92
APP-214ENST00000466453 LZTS1Q9Y250 596 aa9.28□□□□□ -0.92
APP-214ENST00000466453 NEUROG3Q9Y4Z2 214 aa9.28□□□□□ -0.92
APP-214ENST00000466453 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms