RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 CMTR2Q8IYT2 770 aaKnown RBP17.23■□□□□ 0.35
HMGXB4-206ENST00000466438 VN1R2Q8NFZ6 395 aa17.23■□□□□ 0.35
HMGXB4-206ENST00000466438 SPATA33Q96N06 139 aa17.23■□□□□ 0.35
HMGXB4-206ENST00000466438 RMDN3Q96TC7 470 aa17.23■□□□□ 0.35
HMGXB4-206ENST00000466438 CDCA3Q99618 268 aaPredicted RBP17.23■□□□□ 0.35
HMGXB4-206ENST00000466438 RNPEPQ9H4A4 650 aa17.23■□□□□ 0.35
HMGXB4-206ENST00000466438 COL20A1Q9P218 1284 aa17.23■□□□□ 0.35
HMGXB4-206ENST00000466438 TTC3P53804 2025 aa17.22■□□□□ 0.35
HMGXB4-206ENST00000466438 H3BRB1 525 aa17.22■□□□□ 0.35
HMGXB4-206ENST00000466438 RBM10P98175 930 aaKnown RBP17.22■□□□□ 0.35
HMGXB4-206ENST00000466438 S1PR5Q9H228 398 aa17.22■□□□□ 0.35
HMGXB4-206ENST00000466438 MFSD1Q9H3U5 465 aa17.22■□□□□ 0.35
HMGXB4-206ENST00000466438 TUT1Q9H6E5 874 aaKnown RBP17.22■□□□□ 0.35
HMGXB4-206ENST00000466438 NR2E1Q9Y466 385 aa17.22■□□□□ 0.35
HMGXB4-206ENST00000466438 ACACBO00763 2458 aa17.22■□□□□ 0.35
HMGXB4-206ENST00000466438 ENPP3O14638 875 aa17.21■□□□□ 0.35
HMGXB4-206ENST00000466438 PER2O15055 1255 aa17.21■□□□□ 0.35
HMGXB4-206ENST00000466438 HMMRO75330 724 aa17.21■□□□□ 0.35
HMGXB4-206ENST00000466438 SRGAP2BP0DMP2 458 aa17.21■□□□□ 0.35
HMGXB4-206ENST00000466438 PDHBP11177 359 aa17.21■□□□□ 0.35
HMGXB4-206ENST00000466438 TOP1P11387 765 aaKnown RBP17.21■□□□□ 0.35
HMGXB4-206ENST00000466438 GNAT1P11488 350 aa17.21■□□□□ 0.35
HMGXB4-206ENST00000466438 SP100P23497 879 aaPredicted RBP17.21■□□□□ 0.35
HMGXB4-206ENST00000466438 DUSP6Q16828 381 aa17.21■□□□□ 0.35
HMGXB4-206ENST00000466438 CELF3Q5SZQ8 465 aaKnown RBP17.21■□□□□ 0.35
HMGXB4-206ENST00000466438 ARHGEF16Q5VV41 709 aa17.21■□□□□ 0.35
HMGXB4-206ENST00000466438 KIAA2013Q8IYS2 634 aa17.21■□□□□ 0.35
HMGXB4-206ENST00000466438 TBC1D5Q92609 795 aa17.21■□□□□ 0.35
HMGXB4-206ENST00000466438 SEMA4AQ9H3S1 761 aa17.21■□□□□ 0.35
HMGXB4-206ENST00000466438 RANBP6O60518 1105 aaKnown RBP17.2■□□□□ 0.34
HMGXB4-206ENST00000466438 GGPS1O95749 300 aa17.2■□□□□ 0.34
HMGXB4-206ENST00000466438 LMNAP02545 664 aaKnown RBP17.2■□□□□ 0.34
HMGXB4-206ENST00000466438 GHRP10912 638 aa17.2■□□□□ 0.34
HMGXB4-206ENST00000466438 EIF2AK2P19525 551 aaKnown RBP17.2■□□□□ 0.34
HMGXB4-206ENST00000466438 ZNF543Q08ER8 600 aa17.2■□□□□ 0.34
HMGXB4-206ENST00000466438 KCNV1Q6PIU1 500 aa17.2■□□□□ 0.34
HMGXB4-206ENST00000466438 TMEM184AQ6ZMB5 413 aa17.2■□□□□ 0.34
HMGXB4-206ENST00000466438 KCNG4Q8TDN1 519 aa17.2■□□□□ 0.34
HMGXB4-206ENST00000466438 TMEM47Q9BQJ4 181 aa17.2■□□□□ 0.34
HMGXB4-206ENST00000466438 EHMT1Q9H9B1 1298 aa17.2■□□□□ 0.34
HMGXB4-206ENST00000466438 DLL3Q9NYJ7 618 aa17.2■□□□□ 0.34
HMGXB4-206ENST00000466438 PLXNA4Q9HCM2 1894 aa17.19■□□□□ 0.34
HMGXB4-206ENST00000466438 SORBS3O60504 671 aa17.19■□□□□ 0.34
HMGXB4-206ENST00000466438 CHRNA1P02708 482 aa17.19■□□□□ 0.34
HMGXB4-206ENST00000466438 NR3C2P08235 984 aa17.19■□□□□ 0.34
HMGXB4-206ENST00000466438 UBE3AQ05086 875 aa17.19■□□□□ 0.34
HMGXB4-206ENST00000466438 ANGPT1Q15389 498 aa17.19■□□□□ 0.34
HMGXB4-206ENST00000466438 ANKRD54Q6NXT1 300 aa17.19■□□□□ 0.34
HMGXB4-206ENST00000466438 MCF2L2Q86YR7 1114 aa17.19■□□□□ 0.34
HMGXB4-206ENST00000466438 MICAL1Q8TDZ2 1067 aa17.19■□□□□ 0.34
HMGXB4-206ENST00000466438 TSHZ2Q9NRE2 1034 aa17.19■□□□□ 0.34
HMGXB4-206ENST00000466438 ABCB11O95342 1321 aa17.19■□□□□ 0.34
HMGXB4-206ENST00000466438 FRYLO94915 3013 aa17.18■□□□□ 0.34
HMGXB4-206ENST00000466438 CEP250Q9BV73 2442 aa17.18■□□□□ 0.34
HMGXB4-206ENST00000466438 LGALS2P05162 132 aa17.18■□□□□ 0.34
HMGXB4-206ENST00000466438 CTDSPL2Q05D32 466 aa17.18■□□□□ 0.34
HMGXB4-206ENST00000466438 LPIN1Q14693 890 aa17.18■□□□□ 0.34
HMGXB4-206ENST00000466438 CWF19L1Q69YN2 538 aaKnown RBP17.18■□□□□ 0.34
HMGXB4-206ENST00000466438 SYCE2Q6PIF2 218 aa17.18■□□□□ 0.34
HMGXB4-206ENST00000466438 CCDC105Q8IYK2 499 aa17.18■□□□□ 0.34
HMGXB4-206ENST00000466438 SMOC2Q9H3U7 446 aa17.18■□□□□ 0.34
HMGXB4-206ENST00000466438 PXMP2Q9NR77 195 aa17.18■□□□□ 0.34
HMGXB4-206ENST00000466438 SETD4Q9NVD3 440 aa17.18■□□□□ 0.34
HMGXB4-206ENST00000466438 CCDC171Q6TFL3 1326 aa17.18■□□□□ 0.34
HMGXB4-206ENST00000466438 SNHG28P0DPA3 235 aa17.17■□□□□ 0.34
HMGXB4-206ENST00000466438 UBA1P22314 1058 aaKnown RBP17.17■□□□□ 0.34
HMGXB4-206ENST00000466438 TECP42680 631 aa17.17■□□□□ 0.34
HMGXB4-206ENST00000466438 ADAM17P78536 824 aa17.17■□□□□ 0.34
HMGXB4-206ENST00000466438 KCNC3Q14003 757 aa17.17■□□□□ 0.34
HMGXB4-206ENST00000466438 PAN2Q504Q3 1202 aaKnown RBP17.17■□□□□ 0.34
HMGXB4-206ENST00000466438 NPAS4Q8IUM7 802 aa17.17■□□□□ 0.34
HMGXB4-206ENST00000466438 CRIPAKQ8N1N5 446 aa17.17■□□□□ 0.34
HMGXB4-206ENST00000466438 ECHDC1Q9NTX5 307 aa17.17■□□□□ 0.34
HMGXB4-206ENST00000466438 CFAP47Q6ZTR5 3102 aa17.16■□□□□ 0.34
HMGXB4-206ENST00000466438 C2CD4DB7Z1M9 353 aa17.16■□□□□ 0.34
HMGXB4-206ENST00000466438 ORC4O43929 436 aa17.16■□□□□ 0.34
HMGXB4-206ENST00000466438 ABCB7O75027 752 aa17.16■□□□□ 0.34
HMGXB4-206ENST00000466438 PPFIA3O75145 1194 aa17.16■□□□□ 0.34
HMGXB4-206ENST00000466438 TGFB3P10600 412 aa17.16■□□□□ 0.34
HMGXB4-206ENST00000466438 HOXB8P17481 243 aaPredicted RBP17.16■□□□□ 0.34
HMGXB4-206ENST00000466438 AOC1P19801 751 aa17.16■□□□□ 0.34
HMGXB4-206ENST00000466438 PDE12Q6L8Q7 609 aaKnown RBP17.16■□□□□ 0.34
HMGXB4-206ENST00000466438 SIRT2Q8IXJ6 389 aa17.16■□□□□ 0.34
HMGXB4-206ENST00000466438 FLCNQ8NFG4 579 aa17.16■□□□□ 0.34
HMGXB4-206ENST00000466438 MLXIPQ9HAP2 919 aa17.16■□□□□ 0.34
HMGXB4-206ENST00000466438 PPP4R2Q9NY27 417 aa17.16■□□□□ 0.34
HMGXB4-206ENST00000466438 MYO10Q9HD67 2058 aa17.16■□□□□ 0.34
HMGXB4-206ENST00000466438 BAHCC1Q9P281 2608 aa17.15■□□□□ 0.34
HMGXB4-206ENST00000466438 HSPD1P10809 573 aaKnown RBP17.15■□□□□ 0.34
HMGXB4-206ENST00000466438 ARHGAP4P98171 946 aa17.15■□□□□ 0.34
HMGXB4-206ENST00000466438 SP2Q02086 613 aa17.15■□□□□ 0.34
HMGXB4-206ENST00000466438 MGAT3Q09327 533 aa17.15■□□□□ 0.34
HMGXB4-206ENST00000466438 GPATCH4Q5T3I0 446 aaKnown RBP17.15■□□□□ 0.34
HMGXB4-206ENST00000466438 RASGRP4Q8TDF6 673 aa17.15■□□□□ 0.34
HMGXB4-206ENST00000466438 LMBR1Q8WVP7 490 aa17.15■□□□□ 0.34
HMGXB4-206ENST00000466438 LINC01599Q8WXQ3 324 aa17.15■□□□□ 0.34
HMGXB4-206ENST00000466438 NECTIN4Q96NY8 510 aa17.15■□□□□ 0.34
HMGXB4-206ENST00000466438 SEC62Q99442 399 aaKnown RBP17.15■□□□□ 0.34
HMGXB4-206ENST00000466438 APOL5Q9BWW9 433 aa17.15■□□□□ 0.34
HMGXB4-206ENST00000466438 USP26Q9BXU7 913 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms