RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 EIF2AK2P19525 551 aaKnown RBP15.04■□□□□ -0
UBE4B-206ENST00000466379 KRT9P35527 623 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 DNM2P50570 870 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 ERVK-24P63145 666 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 RBM10P98175 930 aaKnown RBP15.04■□□□□ -0
UBE4B-206ENST00000466379 LRRC63Q05C16 580 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 TBC1D8BQ0IIM8 1120 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 PPP2R5CQ13362 524 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 SYCP1Q15431 976 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 SFR1Q86XK3 245 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 SCFD1Q8WVM8 642 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 ATRIPQ8WXE1 791 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 KLRG1Q96E93 195 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 TAAR1Q96RJ0 339 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 TSG101Q99816 390 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 HSD17B14Q9BPX1 270 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 AS3MTQ9HBK9 375 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 WRAP73Q9P2S5 460 aaPredicted RBP15.04■□□□□ -0
UBE4B-206ENST00000466379 RIPK3Q9Y572 518 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 DICER1Q9UPY3 1922 aaKnown RBP15.04■□□□□ -0
UBE4B-206ENST00000466379 A0A1W2PQC6 194 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 FRMD3A2A2Y4 597 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 VWA5AO00534 786 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 RPS6P62753 249 aaKnown RBP15.04■□□□□ -0
UBE4B-206ENST00000466379 TRIM14Q14142 442 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 ZCWPW2Q504Y3 356 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 MCF2L2Q86YR7 1114 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 PCMTD1Q96MG8 357 aaPredicted RBP15.04■□□□□ -0
UBE4B-206ENST00000466379 TRERF1Q96PN7 1200 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 MRPL44Q9H9J2 332 aaKnown RBP15.04■□□□□ -0
UBE4B-206ENST00000466379 STK24Q9Y6E0 443 aa15.04■□□□□ -0
UBE4B-206ENST00000466379 COL11A1P12107 1806 aaPredicted RBP15.03■□□□□ -0
UBE4B-206ENST00000466379 PHIPQ8WWQ0 1821 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 RASSF10A6NK89 507 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 IPO5O00410 1097 aaKnown RBP15.03■□□□□ -0
UBE4B-206ENST00000466379 DYNC1I1O14576 645 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 EYA4O95677 639 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 GTF2F1P35269 517 aaKnown RBP eCLIP15.03■□□□□ -0
UBE4B-206ENST00000466379 SETQ01105 290 aaPredicted RBP15.03■□□□□ -0
UBE4B-206ENST00000466379 TRIM65Q6PJ69 517 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 NSMFQ6X4W1 530 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 KIF18AQ8NI77 898 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 TEKT3Q9BXF9 490 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 SBF1O95248 1867 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 PITPNM2Q9BZ72 1349 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 SRCAPQ6ZRS2 3230 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 SFI1A8K8P3 1242 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 TRAF5O00463 557 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 MRPS9P82933 396 aaKnown RBP15.03■□□□□ -0
UBE4B-206ENST00000466379 DHX37Q8IY37 1157 aaKnown RBP15.03■□□□□ -0
UBE4B-206ENST00000466379 BANK1Q8NDB2 785 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 CCDC51Q96ER9 411 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 NAA15Q9BXJ9 866 aaKnown RBP15.03■□□□□ -0
UBE4B-206ENST00000466379 SPON1Q9HCB6 807 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 TUFT1Q9NNX1 390 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 KCNH7Q9NS40 1196 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 DNAI1Q9UI46 699 aa15.03■□□□□ -0
UBE4B-206ENST00000466379 KIF2AO00139 706 aaPredicted RBP15.02□□□□□ -0.01
UBE4B-206ENST00000466379 FANCGO15287 622 aa15.02□□□□□ -0.01
UBE4B-206ENST00000466379 MYBP10242 640 aa15.02□□□□□ -0.01
UBE4B-206ENST00000466379 VWA3BQ502W6 1294 aa15.02□□□□□ -0.01
UBE4B-206ENST00000466379 RINT1Q6NUQ1 792 aa15.02□□□□□ -0.01
UBE4B-206ENST00000466379 CHP1Q99653 195 aa15.02□□□□□ -0.01
UBE4B-206ENST00000466379 AGPAT5Q9NUQ2 364 aa15.02□□□□□ -0.01
UBE4B-206ENST00000466379 RLFQ13129 1914 aa15.02□□□□□ -0.01
UBE4B-206ENST00000466379 MYCLP12524 364 aaPredicted RBP15.01□□□□□ -0.01
UBE4B-206ENST00000466379 TKFCQ3LXA3 575 aa15.01□□□□□ -0.01
UBE4B-206ENST00000466379 RNF207Q6ZRF8 634 aa15.01□□□□□ -0.01
UBE4B-206ENST00000466379 ACRBPQ8NEB7 543 aa15.01□□□□□ -0.01
UBE4B-206ENST00000466379 KCTD10Q9H3F6 313 aa15.01□□□□□ -0.01
UBE4B-206ENST00000466379 RNF146Q9NTX7 359 aa15.01□□□□□ -0.01
UBE4B-206ENST00000466379 ADGRG1Q9Y653 693 aa15.01□□□□□ -0.01
UBE4B-206ENST00000466379 PRPF6O94906 941 aaKnown RBP15.01□□□□□ -0.01
UBE4B-206ENST00000466379 FGFR1OPO95684 399 aaKnown RBP15.01□□□□□ -0.01
UBE4B-206ENST00000466379 TRIM21P19474 475 aaKnown RBP15.01□□□□□ -0.01
UBE4B-206ENST00000466379 FECHP22830 423 aa15.01□□□□□ -0.01
UBE4B-206ENST00000466379 ETF1P62495 437 aaKnown RBP15.01□□□□□ -0.01
UBE4B-206ENST00000466379 FKBP15Q5T1M5 1219 aa15.01□□□□□ -0.01
UBE4B-206ENST00000466379 CCDC155Q8N6L0 562 aa15.01□□□□□ -0.01
UBE4B-206ENST00000466379 NDST4Q9H3R1 872 aa15.01□□□□□ -0.01
UBE4B-206ENST00000466379 RNF181Q9P0P0 153 aa15.01□□□□□ -0.01
UBE4B-206ENST00000466379 CAPN11Q9UMQ6 739 aa15.01□□□□□ -0.01
UBE4B-206ENST00000466379 LUC7L2Q9Y383 392 aaKnown RBP15.01□□□□□ -0.01
UBE4B-206ENST00000466379 ADM5C9JUS6 153 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 TBCAO75347 108 aaKnown RBP15□□□□□ -0.01
UBE4B-206ENST00000466379 CCDC175P0C221 793 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 FKBP3Q00688 224 aaKnown RBP15□□□□□ -0.01
UBE4B-206ENST00000466379 GHRHRQ02643 423 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 ITGB3BPQ13352 177 aaPredicted RBP15□□□□□ -0.01
UBE4B-206ENST00000466379 BAATQ14032 418 aaPredicted RBP15□□□□□ -0.01
UBE4B-206ENST00000466379 PGM5Q15124 567 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 MAN2A1Q16706 1144 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 PCNX4Q63HM2 1172 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 SNRNP48Q6IEG0 339 aaKnown RBP15□□□□□ -0.01
UBE4B-206ENST00000466379 B3GNT9Q6UX72 402 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 KRT26Q7Z3Y9 468 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 REPS2Q8NFH8 660 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 LXNQ9BS40 222 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 TTYH3Q9C0H2 523 aa15□□□□□ -0.01
UBE4B-206ENST00000466379 LZTFL1Q9NQ48 299 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms