RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 GOLGA5Q8TBA6 731 aa7.56□□□□□ -1.2
CDHR3-204ENST00000466351 COG1Q8WTW3 980 aa7.56□□□□□ -1.2
CDHR3-204ENST00000466351 COA7Q96BR5 231 aa7.56□□□□□ -1.2
CDHR3-204ENST00000466351 PNKPQ96T60 521 aa7.56□□□□□ -1.2
CDHR3-204ENST00000466351 TRIM34Q9BYJ4 488 aa7.56□□□□□ -1.2
CDHR3-204ENST00000466351 DEF6Q9H4E7 631 aa7.56□□□□□ -1.2
CDHR3-204ENST00000466351 SLC39A2Q9NP94 309 aa7.56□□□□□ -1.2
CDHR3-204ENST00000466351 GINM1Q9NU53 330 aa7.56□□□□□ -1.2
CDHR3-204ENST00000466351 TYW1Q9NV66 732 aaKnown RBP7.56□□□□□ -1.2
CDHR3-204ENST00000466351 TMEM260Q9NX78 707 aa7.56□□□□□ -1.2
CDHR3-204ENST00000466351 CWC15Q9P013 229 aaKnown RBP7.56□□□□□ -1.2
CDHR3-204ENST00000466351 ODF2LQ9ULJ1 636 aa7.56□□□□□ -1.2
CDHR3-204ENST00000466351 PCDHA13Q9Y5I0 950 aa7.56□□□□□ -1.2
CDHR3-204ENST00000466351 PCDHA1Q9Y5I3 950 aa7.56□□□□□ -1.2
CDHR3-204ENST00000466351 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.56□□□□□ -1.2
CDHR3-204ENST00000466351 PARP14Q460N5 1801 aa7.56□□□□□ -1.2
CDHR3-204ENST00000466351 SPDYE3A6NKU9 549 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 LRRC53A6NM62 1247 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 PPP1R12BO60237 982 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-204ENST00000466351 MARCH6O60337 910 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 EYA4O95677 639 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 ATP1A1P05023 1023 aaKnown RBP7.55□□□□□ -1.2
CDHR3-204ENST00000466351 IVLP07476 585 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 MAPTP10636 758 aaKnown RBP7.55□□□□□ -1.2
CDHR3-204ENST00000466351 IDEP14735 1019 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 PAFAH1B1P43034 410 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 EPHB4P54760 987 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 MCCD1P59942 119 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-204ENST00000466351 SNRPFP62306 86 aaKnown RBP7.55□□□□□ -1.2
CDHR3-204ENST00000466351 ENPEPQ07075 957 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 PPP2R5CQ13362 524 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 PICALMQ13492 652 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 PTPN21Q16825 1174 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 KNOP1Q1ED39 458 aaKnown RBP7.55□□□□□ -1.2
CDHR3-204ENST00000466351 CCDC40Q4G0X9 1142 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 SYDE2Q5VT97 1194 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 SFMBT2Q5VUG0 894 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 HGSNATQ68CP4 663 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 SLFN13Q68D06 897 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 GBP6Q6ZN66 633 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 NIPA1Q7RTP0 329 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 VPS36Q86VN1 386 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 GPBP1Q86WP2 473 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 FBXO11Q86XK2 927 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 C2CD5Q86YS7 1000 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 CCDC24Q8N4L8 307 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 CAVIN3Q969G5 261 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 CNKSR1Q969H4 720 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 LENG9Q96B70 501 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 PCMTD1Q96MG8 357 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-204ENST00000466351 ARID3AQ99856 593 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 TIPINQ9BVW5 301 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 WDR11Q9BZH6 1224 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 LACRTQ9GZZ8 138 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 DNAJC18Q9H819 358 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 GPCPD1Q9NPB8 672 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 PRDM10Q9NQV6 1147 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 EMILIN3Q9NT22 766 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 MAP3K20Q9NYL2 800 aaKnown RBP7.55□□□□□ -1.2
CDHR3-204ENST00000466351 PUF60Q9UHX1 559 aaKnown RBP7.55□□□□□ -1.2
CDHR3-204ENST00000466351 DNM3Q9UQ16 869 aa7.55□□□□□ -1.2
CDHR3-204ENST00000466351 FRMPD4Q14CM0 1322 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 LOC285556D6RIA3 1793 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 USP17L10C9JJH3 530 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 G3V3G9 751 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 TRAF5O00463 557 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 ZNF263O14978 683 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 MAPK13O15264 365 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 PMM2O15305 246 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 TBC1D12O60347 775 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 TRIM37O94972 964 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 SEC31AO94979 1220 aaKnown RBP7.54□□□□□ -1.2
CDHR3-204ENST00000466351 CCDC172P0C7W6 258 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 EPB41P11171 864 aaKnown RBP7.54□□□□□ -1.2
CDHR3-204ENST00000466351 BCRP11274 1271 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 EEF2P13639 858 aaKnown RBP7.54□□□□□ -1.2
CDHR3-204ENST00000466351 EIF4A3P38919 411 aaKnown RBP7.54□□□□□ -1.2
CDHR3-204ENST00000466351 EPS15P42566 896 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 ZNF131P52739 623 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 NPEPPSP55786 919 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 PPP2R5AQ15172 486 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 NAB2Q15742 525 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 PPP2R5EQ16537 467 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 ABCB5Q2M3G0 1257 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 SLC4A8Q2Y0W8 1093 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 CFAP221Q4G0U5 840 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 FAM83BQ5T0W9 1011 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 DCAF8Q5TAQ9 597 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 SMIM5Q71RC9 77 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 RRAGAQ7L523 313 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 KRT26Q7Z3Y9 468 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 KCNK18Q7Z418 384 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 FAM160B2Q86V87 743 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 CREG2Q8IUH2 290 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 SLC9A9Q8IVB4 645 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 MREGQ8N565 214 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 SLC17A8Q8NDX2 589 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 SCFD1Q8WVM8 642 aa7.54□□□□□ -1.2
CDHR3-204ENST00000466351 GPR101Q96P66 508 aaPredicted RBP7.54□□□□□ -1.2
CDHR3-204ENST00000466351 OSBPL9Q96SU4 736 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms