RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 ZFR2Q9UPR6 939 aaKnown RBP3.76□□□□□ -1.81
CCDC93-205ENST00000466171 R3HCC1Q9Y3T6 440 aaKnown RBP3.76□□□□□ -1.81
CCDC93-205ENST00000466171 NPFFR2Q9Y5X5 522 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 MRVI1Q9Y6F6 885 aa3.76□□□□□ -1.81
CCDC93-205ENST00000466171 B2RBV5 119 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 H0Y858 1186 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 KNG1P01042 644 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 CKMP06732 381 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 GNAT1P11488 350 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 GLRBP48167 497 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 RAC3P60763 192 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 ABHD18Q0P651 414 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 KLF10Q13118 480 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 TUSC3Q13454 348 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 FOXE3Q13461 319 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 FHL2Q14192 279 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 USP10Q14694 798 aaKnown RBP3.75□□□□□ -1.81
CCDC93-205ENST00000466171 SKIDA1Q1XH10 827 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 TCTN3Q6NUS6 607 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 USP53Q70EK8 1073 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 OTOP3Q7RTS5 596 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 PROSER1Q86XN7 944 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 MRRFQ96E11 262 aaKnown RBP3.75□□□□□ -1.81
CCDC93-205ENST00000466171 GNRHR2Q96P88 292 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 CSRNP2Q9H175 543 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 RBPJLQ9UBG7 517 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 WASF3Q9UPY6 502 aa3.75□□□□□ -1.81
CCDC93-205ENST00000466171 WDR33Q9C0J8 1336 aaKnown RBP3.74□□□□□ -1.81
CCDC93-205ENST00000466171 NPIPB8E9PQR5 432 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 CUTAO60888 179 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 COMTP21964 271 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 GRK2P25098 689 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 CSF2RBP32927 897 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 MCM7P33993 719 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 GRK3P35626 688 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 PPP2R2AP63151 447 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 PURAQ00577 322 aaKnown RBP3.74□□□□□ -1.81
CCDC93-205ENST00000466171 GNL2Q13823 731 aaKnown RBP3.74□□□□□ -1.81
CCDC93-205ENST00000466171 KIZQ2M2Z5 673 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 ZMAT1Q5H9K5 638 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 PHF19Q5T6S3 580 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 DENND5AQ6IQ26 1287 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 DPP8Q6V1X1 898 aaPredicted RBP3.74□□□□□ -1.81
CCDC93-205ENST00000466171 RNF207Q6ZRF8 634 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 DPH6Q7L8W6 267 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 GPR155Q7Z3F1 870 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 TAX1BP1Q86VP1 789 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 STPG3Q8N7X2 389 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 UHMK1Q8TAS1 419 aaKnown RBP3.74□□□□□ -1.81
CCDC93-205ENST00000466171 CLEC4DQ8WXI8 215 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 EDAQ92838 391 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 NEIL1Q96FI4 390 aaPredicted RBP3.74□□□□□ -1.81
CCDC93-205ENST00000466171 C1orf159Q96HA4 380 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 PHF20Q9BVI0 1012 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 CARD11Q9BXL7 1154 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 KATNBL1Q9H079 304 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 KCND1Q9NSA2 647 aa3.74□□□□□ -1.81
CCDC93-205ENST00000466171 ZNF839A8K0R7 811 aa3.73□□□□□ -1.81
CCDC93-205ENST00000466171 FOXS1O43638 330 aa3.73□□□□□ -1.81
CCDC93-205ENST00000466171 PFKPQ01813 784 aa3.73□□□□□ -1.81
CCDC93-205ENST00000466171 HSP90AA2PQ14568 343 aaPredicted RBP3.73□□□□□ -1.81
CCDC93-205ENST00000466171 USP39Q53GS9 565 aaKnown RBP3.73□□□□□ -1.81
CCDC93-205ENST00000466171 MIIPQ5JXC2 388 aa3.73□□□□□ -1.81
CCDC93-205ENST00000466171 CD276Q5ZPR3 534 aa3.73□□□□□ -1.81
CCDC93-205ENST00000466171 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.73□□□□□ -1.81
CCDC93-205ENST00000466171 HOMEZQ8IX15 550 aa3.73□□□□□ -1.81
CCDC93-205ENST00000466171 DCAF4Q8WV16 495 aa3.73□□□□□ -1.81
CCDC93-205ENST00000466171 FAM89AQ96GI7 184 aa3.73□□□□□ -1.81
CCDC93-205ENST00000466171 ZFYVE21Q9BQ24 234 aa3.73□□□□□ -1.81
CCDC93-205ENST00000466171 IER2Q9BTL4 223 aa3.73□□□□□ -1.81
CCDC93-205ENST00000466171 PDGFDQ9GZP0 370 aaPredicted RBP3.73□□□□□ -1.81
CCDC93-205ENST00000466171 DSEQ9UL01 958 aa3.73□□□□□ -1.81
CCDC93-205ENST00000466171 IQCA1LA6NCM1 817 aa3.72□□□□□ -1.81
CCDC93-205ENST00000466171 FAM47E-STBD1D6RA91 191 aa3.72□□□□□ -1.81
CCDC93-205ENST00000466171 MSCO60682 206 aa3.72□□□□□ -1.81
CCDC93-205ENST00000466171 ZNF202O95125 648 aa3.72□□□□□ -1.81
CCDC93-205ENST00000466171 POLD1P28340 1107 aa3.72□□□□□ -1.81
CCDC93-205ENST00000466171 PTH1RQ03431 593 aa3.72□□□□□ -1.81
CCDC93-205ENST00000466171 SLC10A6Q3KNW5 377 aa3.72□□□□□ -1.81
CCDC93-205ENST00000466171 MRM1Q6IN84 353 aaKnown RBP3.72□□□□□ -1.81
CCDC93-205ENST00000466171 LBX2Q6XYB7 198 aa3.72□□□□□ -1.81
CCDC93-205ENST00000466171 POLNQ7Z5Q5 900 aa3.72□□□□□ -1.81
CCDC93-205ENST00000466171 SCYL1Q96KG9 808 aa3.72□□□□□ -1.81
CCDC93-205ENST00000466171 KCNJ15Q99712 375 aa3.72□□□□□ -1.81
CCDC93-205ENST00000466171 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.72□□□□□ -1.812e-7■■□□□ 14.2
CCDC93-205ENST00000466171 TACO1Q9BSH4 297 aaKnown RBP3.72□□□□□ -1.81
CCDC93-205ENST00000466171 CDIP1Q9H305 208 aa3.72□□□□□ -1.81
CCDC93-205ENST00000466171 C11orf21Q9P2W6 132 aa3.72□□□□□ -1.81
CCDC93-205ENST00000466171 PPARGC1AQ9UBK2 798 aaKnown RBP3.72□□□□□ -1.81
CCDC93-205ENST00000466171 ING1Q9UK53 422 aaPredicted RBP3.72□□□□□ -1.81
CCDC93-205ENST00000466171 A0A1W2PQU0 124 aa3.71□□□□□ -1.82
CCDC93-205ENST00000466171 RAD17O75943 681 aa3.71□□□□□ -1.82
CCDC93-205ENST00000466171 GJB6O95452 261 aa3.71□□□□□ -1.82
CCDC93-205ENST00000466171 LTFP02788 710 aa3.71□□□□□ -1.82
CCDC93-205ENST00000466171 COL6A2P12110 1019 aa3.71□□□□□ -1.82
CCDC93-205ENST00000466171 CR2P20023 1033 aa3.71□□□□□ -1.82
CCDC93-205ENST00000466171 ACO1P21399 889 aaKnown RBP3.71□□□□□ -1.82
CCDC93-205ENST00000466171 SMN1Q16637 294 aaKnown RBP3.71□□□□□ -1.82
CCDC93-205ENST00000466171 LSM12Q3MHD2 195 aaKnown RBP3.71□□□□□ -1.82
CCDC93-205ENST00000466171 AGBL4Q5VU57 503 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms